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2.2k
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Answer:
A: Define own alphabet and perform MultipleSequenceAlignment in biopython
8.5 years ago by
Peter
6.0k
0
votes
0
replies
1.5k
views
Answer:
A: Biopython SearchIO is beautiful but its future unclear
8.5 years ago by
Peter
6.0k
2
votes
0
replies
3.7k
views
Answer:
A: where is "% Identity" column in blast-xml
8.5 years ago by
Peter
6.0k
0
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3
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8.5k
views
Answer:
A: How to pull gene identifier from genbank file in Biopython
8.7 years ago by
Peter
6.0k
0
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0
replies
2.9k
views
Answer:
Answer: Reading ABI chromatogram trace files with IUPAC ambiguous DNA code
updated 16 months ago by
Ram
43k • written 9.0 years ago by
Peter
6.0k
1
vote
0
replies
3.1k
views
Answer:
A: How to deal with the spaces in the sequence names with biopython?
9.0 years ago by
Peter
6.0k
1
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0
replies
2.7k
views
Answer:
A: Pairwise Alignment, Biopython : Bio.pairwise2
9.0 years ago by
Peter
6.0k
5
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0
replies
3.9k
views
Answer:
Answer: Is it possible to get local blast output directly in Biopython, without making a
updated 15 months ago by
Ram
43k • written 9.0 years ago by
Peter
6.0k
4
votes
1
reply
22k
views
Answer:
A: BioPython: convert fasta to fastq without quality score input file
9.0 years ago by
Peter
6.0k
3
votes
1
reply
2.0k
views
Answer:
Answer: Feature type locations overlap in Biopython. Which number is correct?
updated 22 months ago by
Ram
43k • written 9.0 years ago by
Peter
6.0k
2
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0
replies
3.8k
views
Answer:
A: Biopython: Entrez.efetch causes UnboundLocalError
9.0 years ago by
Peter
6.0k
1
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0
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2.8k
views
Answer:
A: How to replace a set of sequence ID's with another set of sequence ID's ??
9.1 years ago by
Peter
6.0k
2
votes
1
reply
2.9k
views
Answer:
A: python posterior probability in stockholm file
9.1 years ago by
Peter
6.0k
0
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1
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1.6k
views
Answer:
Answer: Biopython Genomediagram label placement
updated 22 months ago by
Ram
43k • written 9.1 years ago by
Peter
6.0k
3
votes
0
replies
4.5k
views
Answer:
A: Extracting exons from CDS CompoundLocations of a genbank file
9.1 years ago by
Peter
6.0k
2
votes
1
reply
2.3k
views
Answer:
Answer: How detect complement reverse sequence in a EMBL/Genbank file with biopython?
updated 23 months ago by
Ram
43k • written 9.1 years ago by
Peter
6.0k
3
votes
1
reply
3.4k
views
Answer:
A: Problem with writing edited feature qualifier to a new gbk file in Biopython
9.1 years ago by
Peter
6.0k
1
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1
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2.9k
views
Answer:
A: biopython test failed
9.2 years ago by
Peter
6.0k
1
vote
0
replies
3.4k
views
Answer:
Answer: How to find transmembrane domain topological direction (extracellular/intracellu
updated 2.0 years ago by
Ram
43k • written 9.2 years ago by
Peter
6.0k
2
votes
1
reply
3.0k
views
Answer:
Answer: Python 3.4, BioPython 1.65: Specifying dictionary keys in FASTA file and writing
updated 2.0 years ago by
Ram
43k • written 9.2 years ago by
Peter
6.0k
0
votes
0
replies
5.1k
views
Answer:
Answer: Extracting Sequence from a FASTA file using biopython
updated 2.0 years ago by
Ram
43k • written 9.2 years ago by
Peter
6.0k
2
votes
1
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7.3k
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Answer:
A: Error importing Biopython module
9.3 years ago by
Peter
6.0k
4
votes
0
replies
6.1k
views
Answer:
Answer: Searching through a multi-fasta file for records containing certain words in the
updated 2.1 years ago by
Ram
43k • written 9.3 years ago by
Peter
6.0k
2
votes
1
reply
4.8k
views
Answer:
Answer: Using Weblogo in Biopython
updated 2.1 years ago by
Ram
43k • written 9.3 years ago by
Peter
6.0k
0
votes
0
replies
5.4k
views
Answer:
Answer: Downloading protein seq from NCBI with biopython results in empty file
updated 2.1 years ago by
Ram
43k • written 9.3 years ago by
Peter
6.0k
1
vote
0
replies
5.4k
views
Answer:
Answer: Local Blast against a specific organism
updated 2.1 years ago by
Ram
43k • written 9.3 years ago by
Peter
6.0k
0
votes
1
reply
2.5k
views
Answer:
Answer: How do you get the entire corresponding gene after a blast search via blast+?
updated 2.1 years ago by
Ram
43k • written 9.3 years ago by
Peter
6.0k
2
votes
0
replies
11k
views
Answer:
Answer: How to extract DNA sequences for individual genes from GenBank complete genome f
updated 3.1 years ago by
Ram
43k • written 9.4 years ago by
Peter
6.0k
0
votes
1
reply
2.4k
views
Answer:
A: duplicating features in genbank file with biopython
9.4 years ago by
Peter
6.0k
2
votes
0
replies
6.5k
views
Answer:
Answer: Filter out specific reads from FASTQ files
updated 2.2 years ago by
Ram
43k • written 9.4 years ago by
Peter
6.0k
0
votes
0
replies
10k
views
Answer:
Answer: Select sequences from fastq.gz file
updated 2.2 years ago by
Ram
43k • written 9.4 years ago by
Peter
6.0k
4
votes
1
reply
8.8k
views
Answer:
Answer: Regular expression matching with Python and biopython SeqIO
updated 3.1 years ago by
Ram
43k • written 9.4 years ago by
Peter
6.0k
1
vote
1
reply
2.4k
views
Answer:
A: Phylo Trees BioSQL BioPython API
9.4 years ago by
Peter
6.0k
1
vote
0
replies
4.3k
views
Answer:
Answer: blast output using -6 format option
updated 2.3 years ago by
Ram
43k • written 9.4 years ago by
Peter
6.0k
3
votes
3
replies
6.8k
views
Answer:
Answer: Can't access individual attributes of tabular outfmt 6 blast output while parsin
updated 2.2 years ago by
Ram
43k • written 9.4 years ago by
Peter
6.0k
1
vote
1
reply
8.1k
views
Answer:
Answer: HTTP Error 502-Biopython-Entrez Files
updated 2.2 years ago by
Ram
43k • written 9.5 years ago by
Peter
6.0k
2
votes
1
reply
2.9k
views
Answer:
A: Mapping blast xml report elements to their variable names in biopython
9.5 years ago by
Peter
6.0k
0
votes
0
replies
1.9k
views
Answer:
Answer: Which Alphabet should I use for making a substitution matrix
updated 2.2 years ago by
Ram
43k • written 9.5 years ago by
Peter
6.0k
2
votes
0
replies
5.7k
views
Answer:
A: parsing hammer 2.3.2 results using biopython
9.5 years ago by
Peter
6.0k
2
votes
0
replies
3.0k
views
Answer:
A: Could the information of Line 3 in fastq file be deleted?
9.6 years ago by
Peter
6.0k
0
votes
1
reply
6.4k
views
Answer:
Answer: Entrez epost + elink returns results out of order with Biopython
updated 2.4 years ago by
Ram
43k • written 9.7 years ago by
Peter
6.0k
9
votes
2
replies
9.1k
views
Answer:
Answer: Get locus_tag list from gene list using genbank file and Biopython
updated 2.4 years ago by
Ram
43k • written 9.7 years ago by
Peter
6.0k
0
votes
1
reply
1.9k
views
Answer:
A: python wrapper for Jfatcat and Jce proteins structure alignment tools
9.8 years ago by
Peter
6.0k
1
vote
1
reply
8.0k
views
Answer:
A: Using Biopython for BLAST Queries is very slow
9.9 years ago by
Peter
6.0k
2
votes
0
replies
4.0k
views
Answer:
A: How to convert a Generic Affymetrx CEL file to Biopython compatible CEL file?
10.0 years ago by
Peter
6.0k
0
votes
1
reply
4.0k
views
Answer:
A: I am running blast over internet using biopython but its giving connection error
10.0 years ago by
Peter
6.0k
2
votes
0
replies
7.3k
views
Answer:
Answer: How to trim ngs sequences according to the phred score using python/biopython
updated 2.6 years ago by
Ram
43k • written 10.0 years ago by
Peter
6.0k
0
votes
0
replies
2.5k
views
Answer:
A: biopython installation on a web server
updated 10.0 years ago by
Dan D
7.4k • written 10.0 years ago by
Peter
6.0k
1
vote
0
replies
23k
views
Answer:
A: how to parse blast output using biopython
10.0 years ago by
Peter
6.0k
2
votes
0
replies
3.0k
views
Answer:
A: BioPython error parsing standard GenBank file
10.0 years ago by
Peter
6.0k
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