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Answer: A: Define own alphabet and perform MultipleSequenceAlignment in biopython
9.5 years ago by Peter 6.0k
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Answer: A: Biopython SearchIO is beautiful but its future unclear
9.5 years ago by Peter 6.0k
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Answer: A: where is "% Identity" column in blast-xml
9.5 years ago by Peter 6.0k
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3
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9.9k
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Answer: A: How to pull gene identifier from genbank file in Biopython
9.7 years ago by Peter 6.0k
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Answer: Answer: Reading ABI chromatogram trace files with IUPAC ambiguous DNA code
updated 2.3 years ago by 45k • written 9.9 years ago by 6.0k
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Answer: A: How to deal with the spaces in the sequence names with biopython?
10.0 years ago by Peter 6.0k
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3.1k
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Answer: A: Pairwise Alignment, Biopython : Bio.pairwise2
10.0 years ago by Peter 6.0k
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4.1k
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Answer: Answer: Is it possible to get local blast output directly in Biopython, without making a
updated 2.2 years ago by 45k • written 10.0 years ago by 6.0k
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1
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24k
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Answer: A: BioPython: convert fasta to fastq without quality score input file
10.0 years ago by Peter 6.0k
3
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1
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2.3k
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Answer: Answer: Feature type locations overlap in Biopython. Which number is correct?
updated 2.8 years ago by 45k • written 10.0 years ago by 6.0k
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3.9k
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Answer: A: Biopython: Entrez.efetch causes UnboundLocalError
10.0 years ago by Peter 6.0k
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Answer: A: How to replace a set of sequence ID's with another set of sequence ID's ??
10.0 years ago by Peter 6.0k
2
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1
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3.2k
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Answer: A: python posterior probability in stockholm file
10.0 years ago by Peter 6.0k
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1
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1.8k
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Answer: Answer: Biopython Genomediagram label placement
updated 2.8 years ago by 45k • written 10.0 years ago by 6.0k
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4.9k
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Answer: A: Extracting exons from CDS CompoundLocations of a genbank file
10.1 years ago by Peter 6.0k
2
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1
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2.5k
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Answer: Answer: How detect complement reverse sequence in a EMBL/Genbank file with biopython?
updated 2.9 years ago by 45k • written 10.1 years ago by 6.0k
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3.7k
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Answer: A: Problem with writing edited feature qualifier to a new gbk file in Biopython
10.1 years ago by Peter 6.0k
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1
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3.2k
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Answer: A: biopython test failed
10.1 years ago by Peter 6.0k
1
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0
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3.8k
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Answer: Answer: How to find transmembrane domain topological direction (extracellular/intracellu
updated 3.0 years ago by 45k • written 10.2 years ago by 6.0k
2
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1
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3.2k
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Answer: Answer: Python 3.4, BioPython 1.65: Specifying dictionary keys in FASTA file and writing
updated 3.0 years ago by 45k • written 10.2 years ago by 6.0k
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5.5k
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Answer: Answer: Extracting Sequence from a FASTA file using biopython
updated 3.0 years ago by 45k • written 10.2 years ago by 6.0k
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7.9k
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Answer: A: Error importing Biopython module
10.2 years ago by Peter 6.0k
4
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6.9k
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Answer: Answer: Searching through a multi-fasta file for records containing certain words in the
updated 3.1 years ago by 45k • written 10.3 years ago by 6.0k
2
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1
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5.1k
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Answer: Answer: Using Weblogo in Biopython
updated 3.1 years ago by 45k • written 10.3 years ago by 6.0k
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Answer: Answer: Downloading protein seq from NCBI with biopython results in empty file
updated 3.1 years ago by 45k • written 10.3 years ago by 6.0k
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Answer: Answer: Local Blast against a specific organism
updated 3.1 years ago by 45k • written 10.3 years ago by 6.0k
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1
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2.7k
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Answer: Answer: How do you get the entire corresponding gene after a blast search via blast+?
updated 3.1 years ago by 45k • written 10.3 years ago by 6.0k
2
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0
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12k
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Answer: Answer: How to extract DNA sequences for individual genes from GenBank complete genome f
updated 4.0 years ago by 45k • written 10.4 years ago by 6.0k
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2.8k
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Answer: A: duplicating features in genbank file with biopython
10.4 years ago by Peter 6.0k
2
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0
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7.1k
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Answer: Answer: Filter out specific reads from FASTQ files
updated 3.2 years ago by 45k • written 10.4 years ago by 6.0k
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0
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11k
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Answer: Answer: Select sequences from fastq.gz file
updated 3.2 years ago by 45k • written 10.4 years ago by 6.0k
4
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1
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9.2k
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Answer: Answer: Regular expression matching with Python and biopython SeqIO
updated 4.0 years ago by 45k • written 10.4 years ago by 6.0k
1
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1
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2.7k
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Answer: A: Phylo Trees BioSQL BioPython API
10.4 years ago by Peter 6.0k
1
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4.8k
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Answer: Answer: blast output using -6 format option
updated 3.2 years ago by 45k • written 10.4 years ago by 6.0k
3
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3
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7.8k
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Answer: Answer: Can't access individual attributes of tabular outfmt 6 blast output while parsin
updated 3.2 years ago by 45k • written 10.4 years ago by 6.0k
1
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1
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8.9k
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Answer: Answer: HTTP Error 502-Biopython-Entrez Files
updated 3.2 years ago by 45k • written 10.4 years ago by 6.0k
2
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1
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3.2k
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Answer: A: Mapping blast xml report elements to their variable names in biopython
10.4 years ago by Peter 6.0k
0
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0
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2.2k
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Answer: Answer: Which Alphabet should I use for making a substitution matrix
updated 3.2 years ago by 45k • written 10.4 years ago by 6.0k
2
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0
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6.3k
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Answer: A: parsing hammer 2.3.2 results using biopython
10.5 years ago by Peter 6.0k
2
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0
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3.3k
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Answer: A: Could the information of Line 3 in fastq file be deleted?
10.5 years ago by Peter 6.0k
0
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1
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7.4k
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Answer: Answer: Entrez epost + elink returns results out of order with Biopython
updated 3.3 years ago by 45k • written 10.6 years ago by 6.0k
9
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2
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9.6k
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Answer: Answer: Get locus_tag list from gene list using genbank file and Biopython
updated 3.3 years ago by 45k • written 10.7 years ago by 6.0k
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1
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2.2k
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Answer: A: python wrapper for Jfatcat and Jce proteins structure alignment tools
10.7 years ago by Peter 6.0k
1
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1
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8.9k
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Answer: A: Using Biopython for BLAST Queries is very slow
10.9 years ago by Peter 6.0k
2
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0
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4.2k
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Answer: A: How to convert a Generic Affymetrx CEL file to Biopython compatible CEL file?
10.9 years ago by Peter 6.0k
0
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1
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4.2k
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Answer: A: I am running blast over internet using biopython but its giving connection error
11.0 years ago by Peter 6.0k
2
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0
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7.9k
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Answer: Answer: How to trim ngs sequences according to the phred score using python/biopython
updated 3.6 years ago by 45k • written 11.0 years ago by 6.0k
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0
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2.7k
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Answer: A: biopython installation on a web server
updated 11.0 years ago by 7.4k • written 11.0 years ago by 6.0k
1
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0
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24k
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Answer: A: how to parse blast output using biopython
11.0 years ago by Peter 6.0k
2
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0
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3.3k
views
Answer: A: BioPython error parsing standard GenBank file
11.0 years ago by Peter 6.0k
197 results • Page 2 of 4
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