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2
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3
replies
3.1k
views
Answer: A: Pair end merging and statistical output
8.4 years ago by Brian Bushnell 20k
0
votes
0
replies
2.7k
views
Comment: C: How good are bwa-mem and stampy when dealing with low quality reads?
8.4 years ago by Brian Bushnell 20k
2
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1
reply
2.9k
views
Comment: C: How to convert fastq file with raw reads to draft genome fastq file ?
8.4 years ago by Brian Bushnell 20k
1
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0
replies
2.1k
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Comment: C: Is there any reason not to run RS_ReadsOfInsert?
8.4 years ago by Brian Bushnell 20k
0
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0
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2.1k
views
Comment: C: Is there any reason not to run RS_ReadsOfInsert?
8.4 years ago by Brian Bushnell 20k
0
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0
replies
6.9k
views
Comment: C: Remove duplicates reads Ids
8.4 years ago by Brian Bushnell 20k
0
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0
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2.0k
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Comment: C: pre-processing whole genome data
8.4 years ago by Brian Bushnell 20k
0
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1
reply
2.4k
views
Comment: C: Extracting the best reads that align multiple times
8.4 years ago by Brian Bushnell 20k
0
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1
reply
1.8k
views
Comment: C: Assembly of two ends of the sequence
8.4 years ago by Brian Bushnell 20k
0
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1
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1.8k
views
Comment: C: Assembly of two ends of the sequence
8.4 years ago by Brian Bushnell 20k
0
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0
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1.6k
views
Comment: C: Filtering options for deep exome target sequencing
8.4 years ago by Brian Bushnell 20k
0
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1
reply
3.9k
views
Comment: C: Reads length Distribution of ONT reads and Error rate
8.4 years ago by Brian Bushnell 20k
0
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0
replies
3.1k
views
Comment: C: Reason for multiple mapping of reads ?
8.4 years ago by Brian Bushnell 20k
5
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2
replies
6.6k
views
Answer: A: Bacterial de novo genome assembly
8.4 years ago by Brian Bushnell 20k
0
votes
1
reply
3.9k
views
Comment: C: Reads length Distribution of ONT reads and Error rate
8.4 years ago by Brian Bushnell 20k
0
votes
1
reply
3.9k
views
Answer: A: Reads length Distribution of ONT reads and Error rate
8.4 years ago by Brian Bushnell 20k
0
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0
replies
2.1k
views
Comment: C: Reduce/Select reads/lines ffrom files using terminal
8.4 years ago by Brian Bushnell 20k
0
votes
0
replies
7.8k
views
Comment: C: Probability of finding a common sub-sequence of at least 'k' nucleotides between
8.4 years ago by Brian Bushnell 20k
1
vote
0
replies
2.1k
views
Answer: A: Reduce/Select reads/lines ffrom files using terminal
8.4 years ago by Brian Bushnell 20k
5
votes
1
reply
7.8k
views
Answer: A: Probability of finding a common sub-sequence of at least 'k' nucleotides between
8.4 years ago by Brian Bushnell 20k
0
votes
0
replies
5.3k
views
Comment: C: Picard Markduplicates Problem
8.4 years ago by Brian Bushnell 20k
0
votes
1
reply
5.3k
views
Comment: C: Picard Markduplicates Problem
8.4 years ago by Brian Bushnell 20k
1
vote
1
reply
7.8k
views
Comment: C: Probability of finding a common sub-sequence of at least 'k' nucleotides between
8.4 years ago by Brian Bushnell 20k
0
votes
1
reply
7.8k
views
Comment: C: Probability of finding a common sub-sequence of at least 'k' nucleotides between
8.4 years ago by Brian Bushnell 20k
0
votes
0
replies
4.9k
views
Comment: C: Normalization methods for metagenomics WGS data (not 16S data)
8.4 years ago by Brian Bushnell 20k
0
votes
1
reply
4.9k
views
Comment: C: Normalization methods for metagenomics WGS data (not 16S data)
8.4 years ago by Brian Bushnell 20k
1
vote
0
replies
7.3k
views
Comment: C: MiSeq reagent kit version 3 : bad reads qualities
8.4 years ago by Brian Bushnell 20k
0
votes
1
reply
5.8k
views
Comment: C: BWA-MEM get different results with different threads
8.4 years ago by Brian Bushnell 20k
5
votes
1
reply
3.5k
views
Answer: A: Calling SNPs with samtools: how to specify how many supporting observations are
8.4 years ago by Brian Bushnell 20k
5
votes
2
replies
11k
views
Answer: Answer: Should I merge forward and reverse reads before mapping
updated 3.6 years ago by 45k • written 10.8 years ago by 20k
0
votes
0
replies
3.8k
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Comment: C: MutScan: detect and visualize target mutations by just scanning FastQ, 50X faste
8.4 years ago by Brian Bushnell 20k
5
votes
1
reply
5.8k
views
Answer: A: BWA-MEM get different results with different threads
8.4 years ago by Brian Bushnell 20k
0
votes
0
replies
2.6k
views
Comment: C: Help with Samtools
8.4 years ago by Brian Bushnell 20k
10
votes
1
reply
95k
views
Answer: A: Sequence Length Distribution From A Fastq File
8.4 years ago by Brian Bushnell 20k
0
votes
1
reply
2.6k
views
Answer: C: Help with Samtools
8.4 years ago by Brian Bushnell 20k
0
votes
0
replies
2.8k
views
Comment: C: How to align non overlapping fastq files
8.4 years ago by Brian Bushnell 20k
0
votes
1
reply
1.8k
views
Comment: C: Simulated DNA Sequence Tools with known variant sites output file
8.4 years ago by Brian Bushnell 20k
1
vote
1
reply
4.6k
views
Answer: A: Calling SNPs with low coverage
8.4 years ago by Brian Bushnell 20k
2
votes
1
reply
3.0k
views
Answer: A: Any comparisons of read length for variant calling?
8.4 years ago by Brian Bushnell 20k
0
votes
1
reply
1.5k
views
Comment: C: Which tool was used to generate this mapping file?
8.4 years ago by Brian Bushnell 20k
2
votes
1
reply
15k
views
Comment: C: Differences between trimming tools: cutadapt, bbduk and sickle
8.4 years ago by Brian Bushnell 20k
0
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0
replies
9.5k
views
Comment: C: Target fragment size versus final insert size
8.5 years ago by Brian Bushnell 20k
0
votes
0
replies
3.8k
views
Comment: C: Minimum length in fastq quality trimmer with FASTX toolkit
8.5 years ago by Brian Bushnell 20k
0
votes
0
replies
6.3k
views
Comment: C: Faster way to get coverage per base
8.5 years ago by Brian Bushnell 20k
1
vote
0
replies
3.8k
views
Answer: A: Extracting fasta sequences with identical header
8.5 years ago by Brian Bushnell 20k
0
votes
0
replies
2.5k
views
Comment: C: Double peaks on FASTQC
8.5 years ago by Brian Bushnell 20k
0
votes
0
replies
2.2k
views
Answer: A: Number of reference sequence contigs in sam/bam header does not match the number
8.5 years ago by Brian Bushnell 20k
1
vote
1
reply
2.3k
views
Comment: C: Aligned the same reads to two similar genomes, want to filter for reads aligning
8.5 years ago by Brian Bushnell 20k
1
vote
0
replies
2.5k
views
Answer: A: Double peaks on FASTQC
8.5 years ago by Brian Bushnell 20k
0
votes
1
reply
6.3k
views
Comment: C: Faster way to get coverage per base
8.5 years ago by Brian Bushnell 20k
2,083 results • Page 17 of 42
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