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2
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2
replies
4.0k
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Answer: A: Determine ploidy using SNP-Calling
8.6 years ago by Brian Bushnell 20k
0
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0
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3.0k
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Comment: C: BBMap error with no output
8.6 years ago by Brian Bushnell 20k
0
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0
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41k
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Comment: C: Introducing Clumpify: Create 30% Smaller, Faster Gzipped Fastq Files. And remov
8.6 years ago by Brian Bushnell 20k
0
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2
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6.9k
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Comment: C: Fastq Trimmer by pattern
8.6 years ago by Brian Bushnell 20k
2
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0
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5.1k
views
Comment: C: Explaining purpose of using FastQC to a colleague
8.6 years ago by Brian Bushnell 20k
1
vote
1
reply
3.0k
views
Answer: A: BBMap error with no output
8.6 years ago by Brian Bushnell 20k
2
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5
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3.8k
views
Answer: A: Metagenome Read Simulators
8.6 years ago by Brian Bushnell 20k
0
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0
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2.7k
views
Comment: C: A tool to cut off a certain length of nucleotide from reads
8.6 years ago by Brian Bushnell 20k
2
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1
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2.7k
views
Answer: A: A tool to cut off a certain length of nucleotide from reads
8.6 years ago by Brian Bushnell 20k
1
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0
replies
2.1k
views
Comment: C: perl or the other scripts converting text file
8.6 years ago by Brian Bushnell 20k
1
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1
reply
2.1k
views
Comment: C: perl or the other scripts converting text file
8.6 years ago by Brian Bushnell 20k
0
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0
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17k
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Comment: C: fasta file to tab delimited file
8.6 years ago by Brian Bushnell 20k
0
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1
reply
13k
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Comment: C: Extract specific reads from FASTQ files based on subsequence
8.6 years ago by Brian Bushnell 20k
1
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1
reply
13k
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Comment: C: Extract specific reads from FASTQ files based on subsequence
8.6 years ago by Brian Bushnell 20k
2
votes
1
reply
13k
views
Answer: A: Extract specific reads from FASTQ files based on subsequence
updated 8.6 years ago by 45k • written 10.4 years ago by 20k
0
votes
0
replies
2.9k
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Comment: C: Mismatch on first base gives wrong TSS
8.6 years ago by Brian Bushnell 20k
3
votes
2
replies
5.1k
views
Answer: A: Explaining purpose of using FastQC to a colleague
8.6 years ago by Brian Bushnell 20k
0
votes
1
reply
2.9k
views
Comment: C: Mismatch on first base gives wrong TSS
8.6 years ago by Brian Bushnell 20k
0
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0
replies
2.5k
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Comment: C: How to use R`s Short read package to get a quality report on a set of paired fas
8.6 years ago by Brian Bushnell 20k
0
votes
1
reply
17k
views
Comment: C: MinHash Sketch - A Tool for Rapid Sequence Comparison
8.6 years ago by Brian Bushnell 20k
1
vote
1
reply
2.5k
views
Comment: C: How to use R`s Short read package to get a quality report on a set of paired fas
8.6 years ago by Brian Bushnell 20k
0
votes
0
replies
3.7k
views
Comment: C: How to call variants using BBMap, if possible with charts and graphics?
8.7 years ago by Brian Bushnell 20k
0
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1
reply
2.8k
views
Comment: C: How to reduce annotation errors using SNPEff on BBMap`s and Pilon`s VCFs?
8.7 years ago by Brian Bushnell 20k
0
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0
replies
5.0k
views
Comment: C: Bowtie Sam output analysis
8.7 years ago by Brian Bushnell 20k
1
vote
0
replies
2.2k
views
Comment: C: Using BBMap for ChIP-seq data
8.7 years ago by Brian Bushnell 20k
0
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1
reply
2.2k
views
Comment: C: Using BBMap for ChIP-seq data
8.7 years ago by Brian Bushnell 20k
0
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1
reply
5.0k
views
Comment: C: Bowtie Sam output analysis
8.7 years ago by Brian Bushnell 20k
0
votes
1
reply
3.7k
views
Comment: C: How to call variants using BBMap, if possible with charts and graphics?
8.7 years ago by Brian Bushnell 20k
1
vote
2
replies
3.7k
views
Answer: A: How to call variants using BBMap, if possible with charts and graphics?
8.7 years ago by Brian Bushnell 20k
1
vote
2
replies
4.1k
views
Comment: C: compiling kmergenie 1.7038. Is it possible?
8.7 years ago by Brian Bushnell 20k
1
vote
1
reply
2.1k
views
Answer: A: denovo-assembly with novel genes inserted
8.7 years ago by Brian Bushnell 20k
0
votes
0
replies
2.7k
views
Comment: C: Is De-Bruijn graph only the best approach for assembling short reads from 2nd ge
8.7 years ago by Brian Bushnell 20k
0
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2
replies
3.1k
views
Comment: C: How to to run GATK variant call on the .bam or .sam and reference in a minimal l
8.7 years ago by Brian Bushnell 20k
0
votes
2
replies
3.1k
views
Comment: C: How to to run GATK variant call on the .bam or .sam and reference in a minimal l
8.7 years ago by Brian Bushnell 20k
0
votes
0
replies
1.5k
views
Answer: C: Primer/adapter trimming for antibody sequencing data?
8.7 years ago by Brian Bushnell 20k
4
votes
1
reply
2.9k
views
Answer: A: Become a Professional Biinformatician in NGS, Microarray in very fair price. Reg
8.7 years ago by Brian Bushnell 20k
0
votes
0
replies
1.6k
views
Comment: C: strange rules from VCF file
8.7 years ago by Brian Bushnell 20k
1
vote
0
replies
4.2k
views
Answer: A: JGI's Taxonomy Server
8.7 years ago by Brian Bushnell 20k
4
votes
3
replies
4.2k
views
Forum: JGI's Taxonomy Server
bbtools nt taxonomy bbmap ncbi
updated 2.6 years ago by 45k • written 8.7 years ago by 20k
0
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1
reply
5.0k
views
Comment: C: Bowtie Sam output analysis
8.7 years ago by Brian Bushnell 20k
0
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0
replies
1.9k
views
Comment: C: Imputation and phasing of one sample at a time or all samples together ?
8.7 years ago by Brian Bushnell 20k
0
votes
1
reply
12k
views
Comment: C: Issue with installing bowtie2
8.7 years ago by Brian Bushnell 20k
0
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0
replies
1.6k
views
Comment: C: bwtool Alternative tool
8.7 years ago by Brian Bushnell 20k
2
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0
replies
24k
views
Answer: A: How does sliding window work in Trimmomatic
8.7 years ago by Brian Bushnell 20k
0
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1
reply
5.0k
views
Comment: C: Bowtie Sam output analysis
8.7 years ago by Brian Bushnell 20k
0
votes
0
replies
5.9k
views
Comment: C: Replace vcf in-house variant IDs with dnSNP variant IDs
8.7 years ago by Brian Bushnell 20k
0
votes
0
replies
3.3k
views
Answer: A: Use Bowtie to trim reads in fastq files
8.7 years ago by Brian Bushnell 20k
1
vote
0
replies
6.9k
views
Comment: C: Fastq Trimmer by pattern
8.7 years ago by Brian Bushnell 20k
0
votes
1
reply
4.6k
views
Comment: C: Troubleshooting low quality mapping
8.7 years ago by Brian Bushnell 20k
0
votes
1
reply
6.9k
views
Comment: C: Fastq Trimmer by pattern
8.7 years ago by Brian Bushnell 20k
2,083 results • Page 21 of 42
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