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1
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6.0k
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Answer: A: samtools merge extremely slow
updated 5.9 years ago by 45k • written 9.8 years ago by 20k
1
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2
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3.5k
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Comment: C: Identify sequencing adaptor contamination programatically
updated 5.9 years ago by 45k • written 9.8 years ago by 20k
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0
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2.0k
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Answer: A: Fast imputation of variants for 4x WGS?
updated 5.9 years ago by 45k • written 9.8 years ago by 20k
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0
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3.6k
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Answer: A: Extracting nucleotide immediately prior to mapped read
updated 5.9 years ago by 45k • written 9.8 years ago by 20k
4
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1
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14k
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Answer: A: How detrimental are duplicate reads in RNAseq experiments?
updated 5.9 years ago by 45k • written 9.8 years ago by 20k
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1.8k
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Answer: A: Bowtie2 - Force alignment of terminal mismatches
updated 5.9 years ago by 45k • written 9.8 years ago by 20k
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15k
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Comment: C: MarkDuplicates memory issue
updated 5.9 years ago by 45k • written 9.8 years ago by 20k
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2.6k
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Comment: C: how sequenced? dna between the pair-end reads
updated 5.9 years ago by 45k • written 9.8 years ago by 20k
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0
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5.1k
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Answer: C: Does anyone know any specific 1000 genomes WGS data that is around 30x coverage?
updated 5.9 years ago by 45k • written 9.8 years ago by 20k
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1
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2.9k
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Comment: C: Reduce redundancy of alignment based on taxonomy and identity
updated 5.9 years ago by 45k • written 9.8 years ago by 20k
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1
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15k
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Comment: C: MarkDuplicates memory issue
updated 5.9 years ago by 45k • written 9.8 years ago by 20k
0
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1
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15k
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Comment: C: MarkDuplicates memory issue
updated 5.9 years ago by 45k • written 9.8 years ago by 20k
3
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19k
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Answer: A: How to efficiently remove a list of reads from BAM file?
updated 5.9 years ago by 45k • written 9.8 years ago by 20k
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1
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15k
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Comment: C: MarkDuplicates memory issue
updated 5.9 years ago by 45k • written 9.8 years ago by 20k
1
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1
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5.3k
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Answer: A: Buying computational resources vs. renting allocation on cluster
updated 5.9 years ago by 45k • written 9.8 years ago by 20k
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1
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3.0k
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Comment: C: Assembly reads from only one file
updated 5.9 years ago by 45k • written 9.8 years ago by 20k
1
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1
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3.0k
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Comment: C: Assembly reads from only one file
updated 5.9 years ago by 45k • written 9.8 years ago by 20k
1
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1
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3.0k
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Answer: A: Assembly reads from only one file
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
1
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1
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3.4k
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Comment: C: how split the paired-end reads to mutilble paired-end reads?
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
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1
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12k
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Answer: A: Looking for reputable tool to find low complexity regions in FASTQ or BAM files
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
1
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0
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3.9k
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Answer: A: get deletion coverage from .bam file
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
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0
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2.4k
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Comment: C: Mapping ratio when alignment 37bp human NGS reads to mouse genome
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
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1
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6.6k
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Answer: A: Plasmid Genome Assembly
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
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9.6k
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Comment: C: Are XA: tagged reads == SA: tagged BWAMEM aligned reads?
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
2
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1
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27k
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Comment: C: how do I run repeat masker
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
2
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1
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27k
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Comment: C: how do I run repeat masker
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
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1
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2.5k
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Comment: C: Beginner with problem and no idea where to start
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
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2.5k
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Comment: C: Beginner with problem and no idea where to start
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
3
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4.0k
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Answer: A: Is it true that N50 is not an important parameter for quality in Transcriptome A
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
0
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1
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6.0k
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Comment: C: How to do BBmap batch processing correctly?
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
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6.0k
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Comment: C: How to do BBmap batch processing correctly?
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
0
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1
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6.0k
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Comment: C: How to do BBmap batch processing correctly?
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
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3.4k
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Comment: C: Is it possible to include BBMap in Bcbio-nextgen pipeline?
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
2
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0
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3.4k
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Comment: C: Is it possible to include BBMap in Bcbio-nextgen pipeline?
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
0
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0
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3.3k
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Comment: C: How I can reduce the depth of a sequencing when I want to assemble it?
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
0
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1
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2.5k
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Comment: C: Assembling a single transcript sequence from RNA-seq data
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
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1
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3.1k
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Comment: C: auto trimming of adapter and 6 base normalizing sequence from miRNA reads
updated 5.9 years ago by 45k • written 9.2 years ago by 20k
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0
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3.1k
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Answer: A: auto trimming of adapter and 8 base normalizing sequence from miRNA reads
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
2
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0
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2.2k
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Answer: A: Overlapping paired end read simulator
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
2
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0
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3.0k
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Comment: C: Is there a concensus on which k-mers should be counted in a histogram graph of k
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
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2
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3.5k
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Comment: C: How to interpret positive and negative POS values in alternative alignment field
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
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1
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33k
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Comment: C: C program to find complementary of DNA sequence
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
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0
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82k
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Comment: C: How To Remove The Same Sequences In The Fasta Files?
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
2
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0
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11k
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Comment: C: de novo sequence assembly with extremely high coverage
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
0
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1
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11k
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Comment: C: de novo sequence assembly with extremely high coverage
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
1
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1
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11k
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Comment: C: What is wrong here with bbmap and java
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
0
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2
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11k
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Comment: C: What is wrong here with bbmap and java
updated 5.9 years ago by 45k • written 10.0 years ago by 20k
2
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0
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11k
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Comment: C: de novo sequence assembly with extremely high coverage
updated 5.9 years ago by 45k • written 10.0 years ago by 20k
5
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2
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11k
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Answer: A: de novo sequence assembly with extremely high coverage
updated 5.9 years ago by 45k • written 10.0 years ago by 20k
0
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0
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2.7k
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Answer: A: Viral Genome SNP and Indel Detection
updated 5.9 years ago by 45k • written 10.0 years ago by 20k
2,083 results • Page 5 of 42
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