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2
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4.3k
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Answer: A: Tophat's Mean Inner Distance between Mate Pairs
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
0
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1
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3.1k
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Answer: A: improving de novo genome assembly
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
0
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1
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3.7k
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Answer: A: SNP visualization with nucleotide %
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
9
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2
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7.7k
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Answer: A: Why 50bp Illumina run produces 51bp long sequencs?
updated 5.9 years ago by 45k • written 9.9 years ago by 20k
1
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0
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6.4k
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Answer: A: How can I deal with adapter contamination in next-gen sequencing reads?
updated 5.9 years ago by 45k • written 10.0 years ago by 20k
4
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1
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4.9k
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Answer: C: How do I split a combined fastq file downloaded from SRA into separate _1.fq and
updated 5.9 years ago by 45k • written 10.0 years ago by 20k
1
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0
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5.4k
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Comment: C: mapping metagenomics samples to multiple references genome
updated 5.9 years ago by 45k • written 10.0 years ago by 20k
1
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0
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3.7k
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Answer: A: Java fastq String sequence reader
updated 5.9 years ago by 45k • written 10.0 years ago by 20k
2
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1
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5.5k
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Answer: A: Extract sequences from fasta NOT present in list of IDs
updated 5.9 years ago by 45k • written 10.8 years ago by 20k
21
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9
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38k
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What does BAF mean?
BAF variant-calling
updated 5.9 years ago by ▴ 60 • written 8.3 years ago by 20k
2
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0
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14k
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Answer: A: Convert multiple-sequence fasta file to single long sequence
updated 5.9 years ago by 45k • written 10.2 years ago by 20k
3
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0
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2.3k
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Answer: A: RNA-Seq de novo assembly: split ion proton read sequences
updated 5.9 years ago by 45k • written 10.2 years ago by 20k
1
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1
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4.8k
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Answer: A: Extract subset sequences from fasta file
updated 5.9 years ago by 45k • written 10.2 years ago by 20k
1
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0
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8.6k
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Answer: A: How to calculate overall coverage in de novo metagenomics assembly?
updated 5.9 years ago by 45k • written 10.3 years ago by 20k
3
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0
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22k
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Answer: A: Counting mapped reads from a SAM file
updated 5.9 years ago by 45k • written 10.3 years ago by 20k
0
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1
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12k
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Comment: C: how to remove adapter sequence in RNAseq fastq file from a paper.
updated 5.9 years ago by 45k • written 10.3 years ago by 20k
0
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0
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3.0k
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Answer: Answer: Filter fastq file by first two base pairs
updated 2.7 years ago by 45k • written 10.4 years ago by 20k
1
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1
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3.4k
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Answer: A: Manipulating Fasta headers
updated 5.9 years ago by 45k • written 10.5 years ago by 20k
3
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1
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81k
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Answer: A: How To Remove The Same Sequences In The Fasta Files?
updated 5.9 years ago by 45k • written 10.5 years ago by 20k
3
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1
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14k
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Answer: A: small RNA-seq pipelines
updated 5.9 years ago by 45k • written 10.6 years ago by 20k
0
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0
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4.0k
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Comment: C: Counting Mapped reads from Bowtie2 Sam file
updated 5.9 years ago by 45k • written 10.6 years ago by 20k
0
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1
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6.1k
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Answer: Answer: High quality de novo transcriptome assembly rely on merging multiple assembly?
updated 3.4 years ago by 45k • written 10.6 years ago by 20k
3
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1
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8.8k
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Answer: A: Rename Duplicate ID's for Different Fasta Sequences on Windows 7
updated 5.9 years ago by 45k • written 10.6 years ago by 20k
0
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0
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6.2k
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Comment: Comment: script to filter contigs >1kb
updated 3.5 years ago by 45k • written 10.6 years ago by 20k
0
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1
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4.6k
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Comment: C: which tools you use to generate artificial NGS?
updated 5.9 years ago by 45k • written 10.3 years ago by 20k
1
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2
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4.6k
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Answer: A: which tools you use to generate artificial NGS?
updated 5.9 years ago by 45k • written 10.6 years ago by 20k
2
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0
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9.4k
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Answer: A: Counting number of duplicated reads from fastq file
updated 5.9 years ago by 45k • written 10.7 years ago by 20k
2
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1
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8.6k
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Answer: A: Paired End Vs Single End Detection
updated 6.0 years ago by 45k • written 10.7 years ago by 20k
0
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1
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3.2k
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Answer: Answer: BioJava/FASTA file help
updated 3.5 years ago by 45k • written 10.7 years ago by 20k
3
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0
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45k
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Comment: C: Counting Number Of Bases In A Fastq File
updated 6.0 years ago by 45k • written 10.7 years ago by 20k
4
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1
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6.2k
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Answer: Answer: How to copy all fasta-seqs from fasta-files with the seq-lengths between minlen
updated 3.5 years ago by 45k • written 10.7 years ago by 20k
2
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2
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33k
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Comment: C: Number Of Reads In A Sam File Which Are Assigned To Each Chromosome?
updated 6.0 years ago by 45k • written 10.7 years ago by 20k
1
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0
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2.5k
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Answer: A: Fasta sequence of nucleotide sequences
updated 6.0 years ago by 45k • written 10.8 years ago by 20k
0
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1
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7.6k
views
Answer: A: need to separate read1 and read2 to run tophat2
updated 6.0 years ago by 45k • written 10.8 years ago by 20k
0
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1
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6.9k
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Answer: A: Convert FASTQ to FASTA, filter, then convert filtered FASTA back into FASTQ
updated 6.0 years ago by 45k • written 10.8 years ago by 20k
2
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1
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6.6k
views
Answer: Answer: exact command for read normalization using trinity software
updated 3.6 years ago by 45k • written 10.8 years ago by 20k
1
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1
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3.5k
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Comment: C: exact sam file information
updated 6.0 years ago by 45k • written 10.8 years ago by 20k
1
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0
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3.3k
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Answer: A: Simulating sanger sequence reads with mason
updated 6.0 years ago by 45k • written 10.9 years ago by 20k
0
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0
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4.1k
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Answer: A: Pindel too slow. How to speedup
updated 6.0 years ago by 45k • written 10.9 years ago by 20k
3
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2
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6.7k
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Answer: A: Pre-processing And Quality Control of the Raw NGS Data -- > trimming
updated 6.0 years ago by 45k • written 10.9 years ago by 20k
1
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0
replies
2.9k
views
Answer: A: all-mapper for differently trimmed mates
updated 6.0 years ago by 45k • written 10.9 years ago by 20k
0
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1
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5.9k
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Comment: C: Best Aligner for Short-Read (50 bp) Alignment of Non-human Sequences from Human
updated 6.0 years ago by 45k • written 10.8 years ago by 20k
0
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1
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5.9k
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Comment: C: Best Aligner for Short-Read (50 bp) Alignment of Non-human Sequences from Human
updated 6.0 years ago by 45k • written 10.9 years ago by 20k
0
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2
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5.9k
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Answer: Answer: Best Aligner for Short-Read (50 bp) Alignment of Non-human Sequences from Human
updated 3.6 years ago by 45k • written 10.9 years ago by 20k
0
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2
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27k
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Comment: C: how do I run repeat masker
updated 6.1 years ago by 45k • written 9.8 years ago by 20k
0
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1
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27k
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Comment: C: how do I run repeat masker
updated 6.1 years ago by 45k • written 9.8 years ago by 20k
1
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1
reply
27k
views
Comment: C: how do I run repeat masker
updated 6.1 years ago by 45k • written 9.8 years ago by 20k
2
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1
reply
6.1k
views
Answer: A: perl code to extract sequences from multi-line fasta works on all test files but
updated 6.1 years ago by 45k • written 10.5 years ago by 20k
0
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0
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6.1k
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Comment: C: perl code to extract sequences from multi-line fasta works on all test files but
updated 6.1 years ago by 45k • written 9.8 years ago by 20k
0
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2
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24k
views
Answer: A: What Ngs Read Simulators Are Available For Paired-End Data?
updated 6.1 years ago by 45k • written 10.2 years ago by 20k
2,083 results • Page 7 of 42
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