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1
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Comment: C: Converstion of BED with scores into bigWig
8.6 years ago by michael.ante ★ 4.0k
3
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0
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6.1k
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Answer: A: Calculate forward and reverse strand reads from bam
8.6 years ago by michael.ante ★ 4.0k
1
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0
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2.8k
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Answer: A: plot coverage for WES data
8.6 years ago by michael.ante ★ 4.0k
2
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0
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16k
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Comment: C: how to extract pair end reads from bam file using samtool
8.6 years ago by michael.ante ★ 4.0k
2
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1
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6.1k
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Answer: C: RPKM and FPKM directly comparable?
8.7 years ago by michael.ante ★ 4.0k
1
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2
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3.6k
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Comment: C: HT-seq error and empty result
8.7 years ago by michael.ante ★ 4.0k
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0
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2.7k
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Comment: Comment: Ensembl GRCh37 DAS returning GRCh38 results
updated 3.5 years ago by 45k • written 8.7 years ago by ★ 4.0k
1
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1
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1.4k
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Answer: A: Summarizing the Results in R
8.7 years ago by michael.ante ★ 4.0k
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0
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4.4k
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Comment: C: How to merge column text files using terminal command?
8.7 years ago by michael.ante ★ 4.0k
1
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1
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4.4k
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Answer: A: How to merge column text files using terminal command?
8.7 years ago by michael.ante ★ 4.0k
0
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2
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3.9k
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Answer: A: How to print 2 lines if first has "*" in it
8.7 years ago by michael.ante ★ 4.0k
1
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1
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4.8k
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Comment: C: HTSeq not counting all the fragments it should count on a gene
8.7 years ago by michael.ante ★ 4.0k
1
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3
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4.8k
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Comment: C: HTSeq not counting all the fragments it should count on a gene
8.7 years ago by michael.ante ★ 4.0k
0
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1
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8.0k
views
Comment: C: Raw Read count from bam file
8.8 years ago by michael.ante ★ 4.0k
3
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1
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2.1k
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Answer: A: Dear frineds, i wanna ask how can i know the mismatch from bowtie2 output
8.8 years ago by michael.ante ★ 4.0k
1
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0
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3.6k
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Comment: C: Error while running BWA
8.8 years ago by michael.ante ★ 4.0k
1
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1
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3.6k
views
Comment: C: Error while running BWA
8.8 years ago by michael.ante ★ 4.0k
0
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1
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14k
views
Comment: C: How to switch columns in Linux
8.8 years ago by michael.ante ★ 4.0k
1
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1
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14k
views
Comment: C: How to switch columns in Linux
8.8 years ago by michael.ante ★ 4.0k
0
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0
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3.1k
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Comment: C: How to obtain the non-redundant total size of the GRCh38 genome?
8.8 years ago by michael.ante ★ 4.0k
0
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0
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2.8k
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Answer: A: High number of no feature while using htseq-count on Tophat2 aligned as well as
8.8 years ago by michael.ante ★ 4.0k
3
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0
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15k
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Answer: A: FASTA sequence sorting based on the header
8.8 years ago by michael.ante ★ 4.0k
1
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0
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2.5k
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Answer: A: Check my work? Hyper geometric test on enrichment between iCLIP sites across exp
8.8 years ago by michael.ante ★ 4.0k
0
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0
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2.2k
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Answer: A: GFF/GTF for small ncRNAs
8.8 years ago by michael.ante ★ 4.0k
1
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0
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5.7k
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Answer: A: htseq counts on genes (introns + exons)
8.8 years ago by michael.ante ★ 4.0k
0
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2
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1.4k
views
Answer: A: The meaning of SCRIPTURE output file, *.segments
8.9 years ago by michael.ante ★ 4.0k
2
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0
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2.1k
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Answer: A: tab-delimited file - use in bedtools?
8.9 years ago by michael.ante ★ 4.0k
0
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1
reply
2.2k
views
Comment: C: Disadvantages Eukaryotes rna seq pipeline about bacteria
8.9 years ago by michael.ante ★ 4.0k
1
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1
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2.2k
views
Answer: A: Disadvantages Eukaryotes rna seq pipeline about bacteria
8.9 years ago by michael.ante ★ 4.0k
1
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1
reply
7.8k
views
Comment: C: HTSeq error when reading BAM file
9.0 years ago by michael.ante ★ 4.0k
0
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1
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7.8k
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Comment: C: HTSeq error when reading BAM file
9.0 years ago by michael.ante ★ 4.0k
3
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1
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7.8k
views
Comment: C: HTSeq error when reading BAM file
9.0 years ago by michael.ante ★ 4.0k
2
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1
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7.8k
views
Answer: A: HTSeq error when reading BAM file
9.0 years ago by michael.ante ★ 4.0k
1
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1
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7.0k
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Comment: C: How to compute RNA-Seq mapping stats for rRNAs?
9.0 years ago by michael.ante ★ 4.0k
1
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0
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8.3k
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Answer: A: Where can I find a small NGS raw data set?
9.0 years ago by michael.ante ★ 4.0k
0
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0
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4.2k
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Answer: A: Use Bedtools to extract stranded read depth from BAM files
9.0 years ago by michael.ante ★ 4.0k
0
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1
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6.3k
views
Comment: C: Cufflinks- found spliced alignment without XS attribute
9.1 years ago by michael.ante ★ 4.0k
1
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1
reply
6.3k
views
Answer: A: Cufflinks- found spliced alignment without XS attribute
9.1 years ago by michael.ante ★ 4.0k
0
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1
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5.1k
views
Answer: A: Extract intergenic coordinate from gff
9.1 years ago by michael.ante ★ 4.0k
0
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0
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6.0k
views
Comment: C: High number of no feature while using htseq-count on Tophat2 aligned as well as
9.2 years ago by michael.ante ★ 4.0k
1
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0
replies
8.0k
views
Answer: A: Run htseq-count with multiple sam files?
9.3 years ago by michael.ante ★ 4.0k
1
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0
replies
6.0k
views
Comment: C: High number of no feature while using htseq-count on Tophat2 aligned as well as
9.3 years ago by michael.ante ★ 4.0k
1
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1
reply
6.0k
views
Answer: A: High number of no feature while using htseq-count on Tophat2 aligned as well as
9.3 years ago by michael.ante ★ 4.0k
1
vote
1
reply
6.0k
views
Answer: A: High number of no feature while using htseq-count on Tophat2 aligned as well as
9.3 years ago by michael.ante ★ 4.0k
1
vote
1
reply
2.3k
views
Answer: A: Generate bed co-ordinates other then given inout bed file
9.3 years ago by michael.ante ★ 4.0k
2
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1
reply
4.4k
views
Comment: C: Does better results in HTSeq-Count mean that the script was run correctly?
9.3 years ago by michael.ante ★ 4.0k
0
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1
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4.0k
views
Comment: C: Read counts based on genes from samtools, feature count and htseq-count
9.3 years ago by michael.ante ★ 4.0k
1
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1
reply
5.9k
views
Comment: C: Improving alignment rates for RNA-seq
9.3 years ago by michael.ante ★ 4.0k
0
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1
reply
1.7k
views
Comment: C: raw data origine
9.3 years ago by michael.ante ★ 4.0k
3
votes
1
reply
5.9k
views
Answer: A: Improving alignment rates for RNA-seq
9.3 years ago by michael.ante ★ 4.0k
454 results • Page 7 of 10
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