Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
3
votes
1
reply
4.5k
views
Answer: A: HTSeq with transcriptome alignment- finding the right gtf
9.4 years ago by michael.ante ★ 4.0k
1
vote
0
replies
2.9k
views
Comment: C: problem with using gtf file in cufflinks in Galaxy
9.4 years ago by michael.ante ★ 4.0k
0
votes
1
reply
2.9k
views
Answer: A: problem with using gtf file in cufflinks in Galaxy
9.4 years ago by michael.ante ★ 4.0k
1
vote
0
replies
2.5k
views
Answer: A: bed file conversion and comparing with the genome to find its region
9.4 years ago by michael.ante ★ 4.0k
0
votes
1
reply
1.7k
views
Answer: A: raw data origine
9.4 years ago by michael.ante ★ 4.0k
1
vote
0
replies
7.3k
views
Answer: A: calculate FPKM/RPKM values by user friendly software
9.4 years ago by michael.ante ★ 4.0k
0
votes
0
replies
9.9k
views
Comment: C: Extracting last N bases of reads in FASTQ file
9.4 years ago by michael.ante ★ 4.0k
0
votes
1
reply
15k
views
Comment: C: How to use TPM from RNA seq data analysis for differential gene expression analy
9.4 years ago by michael.ante ★ 4.0k
2
votes
1
reply
9.9k
views
Answer: A: Extracting last N bases of reads in FASTQ file
9.4 years ago by michael.ante ★ 4.0k
1
vote
2
replies
12k
views
Comment: C: How can we extract these genes from VCF file?
9.4 years ago by michael.ante ★ 4.0k
3
votes
1
reply
12k
views
Answer: A: How can we extract these genes from VCF file?
9.4 years ago by michael.ante ★ 4.0k
1
vote
1
reply
3.6k
views
Comment: C: How to extract upper/lowercase from fasta to output position and +/-
9.4 years ago by michael.ante ★ 4.0k
2
votes
0
replies
3.6k
views
Answer: A: How to extract upper/lowercase from fasta to output position and +/-
9.4 years ago by michael.ante ★ 4.0k
1
vote
0
replies
14k
views
Comment: C: BAM header file error
9.4 years ago by michael.ante ★ 4.0k
1
vote
0
replies
2.1k
views
Answer: A: Where to find Bioinformatics datasets for the purpose of visualization
9.4 years ago by michael.ante ★ 4.0k
0
votes
1
reply
2.1k
views
Comment: C: Where to find Bioinformatics datasets for the purpose of visualization
9.4 years ago by michael.ante ★ 4.0k
1
vote
1
reply
7.6k
views
Answer: A: rename reads in fastq files
9.4 years ago by michael.ante ★ 4.0k
4
votes
0
replies
2.7k
views
Answer: A: Incompatibility between bbmap and htseq?
9.4 years ago by michael.ante ★ 4.0k
0
votes
0
replies
2.1k
views
Answer: A: whole genome fasta/gtf for cell lines
9.5 years ago by michael.ante ★ 4.0k
1
vote
0
replies
2.9k
views
Answer: A: bam-readcount empty output
9.5 years ago by michael.ante ★ 4.0k
2
votes
0
replies
5.6k
views
Comment: C: Is reference genome same for DNA and RNA sequence alignment
9.5 years ago by michael.ante ★ 4.0k
5
votes
0
replies
8.2k
views
Answer: A: How to convert my text file to GTF, GFF3 or BED file.
9.5 years ago by michael.ante ★ 4.0k
0
votes
0
replies
9.9k
views
Comment: C: Error Cutadapt: FASTQ file is expected to start with '@
9.5 years ago by michael.ante ★ 4.0k
0
votes
2
replies
9.9k
views
Comment: C: Error Cutadapt: FASTQ file is expected to start with '@
9.5 years ago by michael.ante ★ 4.0k
0
votes
1
reply
2.6k
views
Comment: C: Database in which Compounds are classified according to diseases
9.5 years ago by michael.ante ★ 4.0k
1
vote
1
reply
3.4k
views
Answer: A: Re-naming just part of header in fasta file
9.5 years ago by michael.ante ★ 4.0k
0
votes
1
reply
3.9k
views
Comment: C: calculate average value for multiple rows with different values
9.5 years ago by michael.ante ★ 4.0k
4
votes
2
replies
2.0k
views
Comment: C: Add a sequence name!
9.5 years ago by michael.ante ★ 4.0k
3
votes
1
reply
6.0k
views
Answer: A: Mapping to the transcriptome using Bowtie - am I doing it right?
9.5 years ago by michael.ante ★ 4.0k
2
votes
1
reply
2.6k
views
Answer: A: gold standard mRNA differential expression
9.5 years ago by michael.ante ★ 4.0k
0
votes
1
reply
9.6k
views
Comment: C: How to Use Biostars, Part II: Post types, Deleting, (Un)Subscribing, Linking and
9.5 years ago by michael.ante ★ 4.0k
0
votes
0
replies
2.9k
views
Comment: C: Error with bedtools intersect
9.5 years ago by michael.ante ★ 4.0k
0
votes
0
replies
3.1k
views
Answer: A: Interpreting bed file...
9.5 years ago by michael.ante ★ 4.0k
1
vote
1
reply
2.3k
views
Answer: A: Other RNA removal from RNA-Seq Data
9.5 years ago by michael.ante ★ 4.0k
0
votes
0
replies
6.2k
views
Comment: C: Tophat2 Reporting output tracks failed
9.5 years ago by michael.ante ★ 4.0k
0
votes
1
reply
3.7k
views
Comment: C: dexseq_count.py gives zero counts for any exon
9.5 years ago by michael.ante ★ 4.0k
0
votes
1
reply
3.7k
views
Answer: A: dexseq_count.py gives zero counts for any exon
9.5 years ago by michael.ante ★ 4.0k
0
votes
0
replies
2.6k
views
Comment: C: TopHat Allignment - Do I need to run each sequence file separately
9.6 years ago by michael.ante ★ 4.0k
0
votes
0
replies
4.8k
views
Comment: Comment: Comparing two columns in a data frame across many rows using R language
updated 3.2 years ago by 45k • written 9.6 years ago by ★ 4.0k
0
votes
0
replies
2.6k
views
Answer: A: Convertion to gff3 format
9.7 years ago by michael.ante ★ 4.0k
2
votes
1
reply
9.0k
views
Answer: A: How to remove illumina PCR primer 2.01 from RNA-seq samples
9.8 years ago by michael.ante ★ 4.0k
0
votes
1
reply
4.0k
views
Comment: C: The best aligner to align RNA-Seq data into mitochondria genome
9.8 years ago by michael.ante ★ 4.0k
0
votes
1
reply
3.4k
views
Comment: C: two questions in loading data
9.8 years ago by michael.ante ★ 4.0k
2
votes
0
replies
1.5k
views
Answer: A: Question about figure interpretation
9.9 years ago by michael.ante ★ 4.0k
0
votes
0
replies
2.7k
views
Answer: A: filtering bam file
9.9 years ago by michael.ante ★ 4.0k
0
votes
0
replies
11k
views
Comment: C: How long time it typical takes to do a alignment on a human chromosome fastq fil
9.9 years ago by michael.ante ★ 4.0k
1
vote
1
reply
5.2k
views
Comment: C: Annotating RNA-Seq exon junctions
9.9 years ago by michael.ante ★ 4.0k
1
vote
1
reply
5.9k
views
Answer: A: How to find duplicate values in two columns and move them to a third?
9.9 years ago by michael.ante ★ 4.0k
1
vote
0
replies
3.1k
views
Comment: C: Cufflinks bias correction
9.9 years ago by michael.ante ★ 4.0k
1
vote
1
reply
3.2k
views
Answer: A: Blast Tabular to XML
10.0 years ago by michael.ante ★ 4.0k
454 results • Page 8 of 10
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6