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7
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0
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8.0k
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Answer: A: Where did EMBOSS go?
10.4 years ago by thackl ★ 3.0k
3
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1
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14k
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Comment: Comment: Efficiently extract alignments with NH:i:1 field
updated 2.9 years ago by 45k • written 10.4 years ago by ★ 3.0k
1
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1
reply
14k
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Comment: Comment: Efficiently extract alignments with NH:i:1 field
updated 2.9 years ago by 45k • written 10.4 years ago by ★ 3.0k
0
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0
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1.6k
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Comment: C: Way to check if there is local trimmed alihned reads BOWTIE2
10.4 years ago by thackl ★ 3.0k
1
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1
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1.6k
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Comment: C: Way to check if there is local trimmed alihned reads BOWTIE2
10.4 years ago by thackl ★ 3.0k
1
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1
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6.3k
views
Comment: Comment: the defination of insert size in RNA-seq, including the length of read, or not?
updated 2.9 years ago by 45k • written 10.4 years ago by ★ 3.0k
4
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1
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6.3k
views
Answer: Answer: the defination of insert size in RNA-seq, including the length of read, or not?
updated 2.9 years ago by 45k • written 10.4 years ago by ★ 3.0k
0
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0
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4.7k
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Comment: C: which tools you use to generate artificial NGS?
10.4 years ago by thackl ★ 3.0k
2
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1
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4.7k
views
Answer: Answer: which tools you use to generate artificial NGS?
updated 3.6 years ago by 45k • written 10.8 years ago by ★ 3.0k
0
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0
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3.4k
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Comment: Comment: Building consensus without MSA
updated 2.9 years ago by 45k • written 10.4 years ago by ★ 3.0k
2
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2
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3.6k
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Answer: A: Converting back a consensus sequence
10.4 years ago by thackl ★ 3.0k
1
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0
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4.0k
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Answer: A: BLASR Clipping for Pacbio Subreads
10.4 years ago by thackl ★ 3.0k
0
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1
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3.4k
views
Comment: Comment: Building consensus without MSA
updated 2.9 years ago by 45k • written 10.4 years ago by ★ 3.0k
0
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1
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3.4k
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Comment: Comment: Building consensus without MSA
updated 2.9 years ago by 45k • written 10.4 years ago by ★ 3.0k
1
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0
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2.3k
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Comment: Comment: Any tools for extracting aligned part of genome from sam or bam file
updated 2.9 years ago by 45k • written 10.4 years ago by ★ 3.0k
1
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1
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2.3k
views
Answer: Answer: Any tools for extracting aligned part of genome from sam or bam file
updated 2.9 years ago by 45k • written 10.4 years ago by ★ 3.0k
3
votes
1
reply
7.5k
views
Answer: Answer: Estimating SAM file size from fastq
updated 2.9 years ago by 45k • written 10.4 years ago by ★ 3.0k
1
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0
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7.5k
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Comment: Comment: Estimating SAM file size from fastq
updated 2.9 years ago by 45k • written 10.4 years ago by ★ 3.0k
3
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0
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4.1k
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Answer: Answer: PacBio data assembly with Celera
updated 2.9 years ago by 45k • written 10.4 years ago by ★ 3.0k
2
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1
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6.0k
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Answer: Answer: PacBio Sequence name
updated 2.9 years ago by 45k • written 10.4 years ago by ★ 3.0k
0
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0
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8.7k
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Answer: Answer: Short Sequence BLAST Search with Gaps
updated 2.9 years ago by 45k • written 10.4 years ago by ★ 3.0k
38
votes
1
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35k
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Answer: Answer: Paired-end reads - what is what?
updated 2.8 years ago by 45k • written 10.4 years ago by ★ 3.0k
4
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0
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3.5k
views
Answer: Answer: Why a de novo assembler is not a transcript assembler?
updated 2.8 years ago by 45k • written 10.4 years ago by ★ 3.0k
5
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0
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35k
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Comment: Comment: Paired-end reads - what is what?
updated 2.8 years ago by 45k • written 10.4 years ago by ★ 3.0k
3
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0
replies
7.7k
views
Comment: Comment: bwa mem runs slowly the first time
updated 2.8 years ago by 45k • written 10.5 years ago by ★ 3.0k
6
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1
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6.8k
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Answer: A: How to run velvet multithreaded?
10.5 years ago by thackl ★ 3.0k
0
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0
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5.6k
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Comment: Comment: Make multi-fasta using perl
updated 2.7 years ago by 45k • written 10.5 years ago by ★ 3.0k
3
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0
replies
5.6k
views
Comment: Comment: Make multi-fasta using perl
updated 3.3 years ago by 45k • written 10.5 years ago by ★ 3.0k
0
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0
replies
4.3k
views
Answer: Answer: converting a fasta database to blastp database
updated 3.8 years ago by 45k • written 10.5 years ago by ★ 3.0k
7
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0
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5.2k
views
Answer: A: PacBio coverage question for a plant genome
10.5 years ago by thackl ★ 3.0k
0
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0
replies
5.6k
views
Comment: C: How to convert a genebank file to a gff file
10.5 years ago by thackl ★ 3.0k
1
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2
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5.6k
views
Answer: A: How to convert a genebank file to a gff file
10.5 years ago by thackl ★ 3.0k
0
votes
1
reply
25k
views
Comment: Comment: Recommendations For Heterozygous Genome Assembly Software
updated 4.2 years ago by 45k • written 10.5 years ago by ★ 3.0k
1
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1
reply
25k
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Comment: Comment: Recommendations For Heterozygous Genome Assembly Software
updated 4.2 years ago by 45k • written 10.5 years ago by ★ 3.0k
1
vote
1
reply
25k
views
Comment: Comment: Recommendations For Heterozygous Genome Assembly Software
updated 4.2 years ago by 45k • written 10.5 years ago by ★ 3.0k
1
vote
1
reply
25k
views
Comment: Comment: Recommendations For Heterozygous Genome Assembly Software
updated 4.2 years ago by 45k • written 10.5 years ago by ★ 3.0k
6
votes
0
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17k
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Answer: A: How does kmer length affect total assembly size?
10.5 years ago by thackl ★ 3.0k
1
vote
0
replies
7.5k
views
Answer: A: Free Linux server for bio-computing?
10.5 years ago by thackl ★ 3.0k
2
votes
1
reply
2.7k
views
Answer: A: De novo assembly around 1 short length (<100bp) known sequence.
10.5 years ago by thackl ★ 3.0k
0
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0
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3.8k
views
Comment: Comment: Is there any tool or script to evaluate transcriptome assembly quality in terms
updated 3.4 years ago by 45k • written 10.6 years ago by ★ 3.0k
1
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1
reply
3.8k
views
Answer: A: Is there any tool or script to evaluate transcriptome assembly quality in terms
10.6 years ago by thackl ★ 3.0k
0
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0
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3.5k
views
Comment: C: Bowtie 2 Error
10.6 years ago by thackl ★ 3.0k
3
votes
1
reply
7.9k
views
Answer: Answer: Error in sam to bam conversion after bowtie alignment
updated 3.4 years ago by 45k • written 10.6 years ago by ★ 3.0k
1
vote
0
replies
2.1k
views
Answer: A: an image with the conservation of residues
10.6 years ago by thackl ★ 3.0k
0
votes
0
replies
3.2k
views
Comment: C: Convert FRG files back to fastq paired end reads
10.6 years ago by thackl ★ 3.0k
3
votes
1
reply
3.2k
views
Answer: A: Convert FRG files back to fastq paired end reads
10.6 years ago by thackl ★ 3.0k
1
vote
1
reply
3.2k
views
Comment: C: Convert FRG files back to fastq paired end reads
10.6 years ago by thackl ★ 3.0k
0
votes
0
replies
2.9k
views
Comment: C: How to align long primary transcript sequences?
10.6 years ago by thackl ★ 3.0k
0
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1
reply
2.9k
views
Comment: C: How to align long primary transcript sequences?
10.6 years ago by thackl ★ 3.0k
2
votes
1
reply
9.9k
views
Answer: Answer: color a sequence alignment
updated 3.4 years ago by 45k • written 10.6 years ago by ★ 3.0k
222 results • Page 4 of 5
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