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Answer:
Answer: Error at parsing .tlst line (invalid strand): 3210 PGSC0003DMT400030180 ST4.03c
3.0 years ago by
skbrimer
▴ 740
1
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0
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1.4k
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Answer:
A: Snakemake input error with files from inconsistent naming scheme
4.2 years ago by
skbrimer
▴ 740
2
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1
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4.0k
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Answer:
A: How to merge gff3 files?
4.4 years ago by
skbrimer
▴ 740
1
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0
replies
6.3k
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Answer:
A: Bed file loading issues
updated 4.9 years ago by
Ram
44k • written 8.9 years ago by
skbrimer
▴ 740
2
votes
0
replies
2.3k
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Answer:
A: More file parsing :)
updated 4.9 years ago by
Ram
44k • written 8.9 years ago by
skbrimer
▴ 740
0
votes
1
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4.5k
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Answer:
A: calculating within population nucleotide diversity for a virus population
updated 5.0 years ago by
Ram
44k • written 9.1 years ago by
skbrimer
▴ 740
0
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0
replies
1.7k
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Answer:
A: Next gen sequencing
updated 5.0 years ago by
Ram
44k • written 9.1 years ago by
skbrimer
▴ 740
0
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0
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8.7k
views
Answer:
A: Using Biopython to present ORF lengths by identifier
updated 5.0 years ago by
Ram
44k • written 9.1 years ago by
skbrimer
▴ 740
4
votes
0
replies
6.1k
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Answer:
A: Thrown Into A Bioinformatics Position
updated 5.0 years ago by
Ram
44k • written 9.2 years ago by
skbrimer
▴ 740
2
votes
0
replies
6.4k
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Answer:
A: loading yaml file into snakemake
5.1 years ago by
skbrimer
▴ 740
1
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0
replies
13k
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Answer:
A: Appropriate Podcasts For A Bioinformatician?
5.1 years ago by
skbrimer
▴ 740
0
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0
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5.9k
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Answer:
A: pysam alignment error
5.1 years ago by
skbrimer
▴ 740
1
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0
replies
931
views
Answer:
A: Guidance for key amino acid analysis
5.3 years ago by
skbrimer
▴ 740
1
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1
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1.9k
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Answer:
A: Can I perform differential gene expression with samples from Poly-A and Ribo-dep
5.3 years ago by
skbrimer
▴ 740
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5.5k
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Answer:
A: How to read two non-consecutive lines in a file once in python
6.7 years ago by
skbrimer
▴ 740
4
votes
0
replies
5.2k
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Answer:
A: primer3-py Heterodimer Calculations
6.7 years ago by
skbrimer
▴ 740
2
votes
0
replies
3.2k
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Answer:
A: Generating a multi fasta consensus bcftools v1.7
6.7 years ago by
skbrimer
▴ 740
1
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0
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3.2k
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Answer:
A: Generating a multi fasta consensus bcftools v1.7
6.7 years ago by
skbrimer
▴ 740
2
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0
replies
2.4k
views
Answer:
A: python script to sort blast results and fetch best matches from NCBI
6.9 years ago by
skbrimer
▴ 740
2
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1
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2.1k
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Answer:
A: uniprot embl Ncbi
7.1 years ago by
skbrimer
▴ 740
2
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1
reply
10k
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Answer:
A: Download all NCBI gene names, synonyms, and gene ID for an organism
7.1 years ago by
skbrimer
▴ 740
3
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4.3k
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Answer:
A: Need help reading FASTQ file
7.2 years ago by
skbrimer
▴ 740
0
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0
replies
2.5k
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Answer:
A: Group a set of plots using MUMmer
7.9 years ago by
skbrimer
▴ 740
0
votes
2
replies
3.2k
views
Answer:
A: Error while running BWA
8.0 years ago by
skbrimer
▴ 740
1
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2
replies
2.4k
views
Answer:
A: Insertion in intron
8.1 years ago by
skbrimer
▴ 740
0
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0
replies
2.2k
views
Answer:
A: Forest plot interpretation
8.2 years ago by
skbrimer
▴ 740
0
votes
1
reply
2.2k
views
Answer:
A: IGV-results of Bowtie mapping, strange colors!
8.5 years ago by
skbrimer
▴ 740
1
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0
replies
1.9k
views
Answer:
A: VICUNA - how to select optional reference guided merging of contigs
8.6 years ago by
skbrimer
▴ 740
11
votes
1
reply
30k
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Answer:
A: Samtools 1.3 bam to fastq
8.7 years ago by
skbrimer
▴ 740
1
vote
1
reply
12k
views
Answer:
A: Why GATK and bcftools SNP calling different?
8.7 years ago by
skbrimer
▴ 740
2
votes
0
replies
4.9k
views
Answer:
A: ***EDIT*** BioPython: how to edit a fasta file to include a large deletion
8.7 years ago by
skbrimer
▴ 740
1
vote
0
replies
5.6k
views
Answer:
A: EDIT:SOLVED:changing the fasta header in a multi-fasta file with biopython.
8.7 years ago by
skbrimer
▴ 740
1
vote
0
replies
2.5k
views
Answer:
A: Get location based on protein ids from genbankfile
8.7 years ago by
skbrimer
▴ 740
1
vote
1
reply
9.0k
views
Answer:
A: Filtering of low coverage variants from VCF
8.7 years ago by
skbrimer
▴ 740
0
votes
0
replies
2.1k
views
Answer:
A: Detecting structural variants when comparing assembled genome and reference
8.7 years ago by
skbrimer
▴ 740
0
votes
0
replies
4.6k
views
Answer:
A: Help constructing a restriction map of a linear fragment of DNA?
8.8 years ago by
skbrimer
▴ 740
2
votes
0
replies
4.3k
views
Answer:
Answer: Biopython script to change file formats and headers
updated 3.6 years ago by
Ram
44k • written 8.9 years ago by
skbrimer
▴ 740
0
votes
1
reply
2.5k
views
Answer:
Answer: Tools For Analyzing Copy Number Variation
updated 2.3 years ago by
Ram
44k • written 9.0 years ago by
skbrimer
▴ 740
0
votes
1
reply
2.2k
views
Answer:
A: custom search and download sequences for a given Rotavirus strain from database
9.1 years ago by
skbrimer
▴ 740
0
votes
1
reply
2.5k
views
Answer:
Answer: Pan and core genome analysis
updated 2.2 years ago by
Ram
44k • written 9.3 years ago by
skbrimer
▴ 740
0
votes
0
replies
2.2k
views
Answer:
A: [Beginners question]: What determines the number at the end of a gene? (example:
9.3 years ago by
skbrimer
▴ 740
3
votes
0
replies
18k
views
Answer:
Answer: Using Samtools to convert bam to sam file
updated 2.1 years ago by
Ram
44k • written 9.3 years ago by
skbrimer
▴ 740
1
vote
0
replies
2.8k
views
Answer:
A: viral genome concensus calling using samtools
9.4 years ago by
skbrimer
▴ 740
1
vote
1
reply
6.3k
views
Answer:
Answer: Convert VCF to BCF
updated 23 months ago by
Ram
44k • written 9.4 years ago by
skbrimer
▴ 740
1
vote
0
replies
1.3k
views
Answer:
Answer: More MUMmer questions
updated 22 months ago by
Ram
44k • written 9.6 years ago by
skbrimer
▴ 740
2
votes
0
replies
1.7k
views
Answer:
Answer: de novo workflow
updated 22 months ago by
Ram
44k • written 9.6 years ago by
skbrimer
▴ 740
2
votes
1
reply
2.9k
views
Answer:
A: Submitting several BLAST queries using NCBIWWW at once
9.7 years ago by
skbrimer
▴ 740
0
votes
1
reply
1.8k
views
Answer:
Answer: Clc genomics, variant caller
updated 2.7 years ago by
Ram
44k • written 10.0 years ago by
skbrimer
▴ 740
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