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Comment:
Comment: Help in choosing the right metric for ranking genes in fgsea
3 months ago by
alserg
▴ 920
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2.4k
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Comment:
Comment: collapsePathways function throwing error
13 months ago by
alserg
▴ 920
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2.4k
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Comment:
Comment: collapsePathways function throwing error
13 months ago by
alserg
▴ 920
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1
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744
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Comment:
Comment: Get distribution of enrichment scores across all permutations in fgsea
19 months ago by
alserg
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824
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Comment:
Comment: Finding differential subpathways of metabolic networks using RNA-seq data
22 months ago by
alserg
▴ 920
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708
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Comment:
Comment: Query Modules from KEGG
2.4 years ago by
alserg
▴ 920
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2.1k
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Comment:
Comment: fgsea result "size" parameter - can I pull out size of the original pathway?
2.7 years ago by
alserg
▴ 920
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2
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2.1k
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Comment:
Comment: fgsea result "size" parameter - can I pull out size of the original pathway?
2.7 years ago by
alserg
▴ 920
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1
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2.1k
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Comment:
Comment: fgsea result "size" parameter - can I pull out size of the original pathway?
2.7 years ago by
alserg
▴ 920
2
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0
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8.3k
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Comment:
Comment: Any idea how to solve this error in fgsea - "Error in if (any(simpleFgseaRes$mod
2.8 years ago by
alserg
▴ 920
3
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8.3k
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Comment:
Comment: Any idea how to solve this error in fgsea - "Error in if (any(simpleFgseaRes$mod
2.8 years ago by
alserg
▴ 920
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4.1k
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Comment:
C: Thousands of significant differentially expressed genes but no significant enric
3.5 years ago by
alserg
▴ 920
1
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1
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4.1k
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Comment:
C: Thousands of significant differentially expressed genes but no significant enric
3.5 years ago by
alserg
▴ 920
2
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0
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3.0k
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Comment:
C: optimal size of gene sets for fgsea analysis
3.7 years ago by
alserg
▴ 920
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0
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3.9k
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Comment:
C: fgsea nMoreExtreme meaning
3.9 years ago by
alserg
▴ 920
1
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0
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3.9k
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Comment:
C: fgsea nMoreExtreme meaning
3.9 years ago by
alserg
▴ 920
1
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0
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2.6k
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Comment:
C: GSEA on preranked list with weighted enrichment statistic (exponent=1) in R
4.1 years ago by
alserg
▴ 920
1
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1
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5.2k
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Comment:
C: How to view all KEGG reactions?
4.2 years ago by
alserg
▴ 920
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0
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8.6k
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Comment:
C: GSEA PreRanked lists from DESeq2 results table
4.2 years ago by
alserg
▴ 920
1
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0
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4.8k
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Comment:
C: Bioinformatics Contest 2020. Call for problems
4.2 years ago by
alserg
▴ 920
0
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1
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8.6k
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Comment:
C: GSEA PreRanked lists from DESeq2 results table
4.2 years ago by
alserg
▴ 920
0
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1
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8.6k
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Comment:
C: GSEA PreRanked lists from DESeq2 results table
4.2 years ago by
alserg
▴ 920
1
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1
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3.1k
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Comment:
C: Bonferroni multiple corrections question
4.5 years ago by
alserg
▴ 920
1
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0
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1.4k
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Comment:
C: Pathway test for reversal of effect (three-condition comparison)
5.8 years ago by
alserg
▴ 920
2
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8.9k
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Comment:
C: GSEA following DESeq2
6.7 years ago by
alserg
▴ 920
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0
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4.8k
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Comment:
C: How do I obtain germline mutation for TCGA samples?
6.8 years ago by
alserg
▴ 920
1
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2
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5.9k
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Comment:
C: Simplest way to perform GSEA from a weighted list of entrez gene ids
7.8 years ago by
alserg
▴ 920
0
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1
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5.9k
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Comment:
C: Simplest way to perform GSEA from a weighted list of entrez gene ids
7.8 years ago by
alserg
▴ 920
0
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0
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2.9k
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Comment:
Comment: KEGG rPair mapping to molfile
updated 3.1 years ago by
Ram
43k • written 9.3 years ago by
alserg
▴ 920
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