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3
votes
0
replies
5.7k
views
Answer:
Answer: Genomic Bam To Transcriptome Bam
10 weeks ago by
opplatek
▴ 220
0
votes
0
replies
1.5k
views
Comment:
Comment: bbduk.sh exceeding requested threads in an alignment pipeline
6 months ago by
opplatek
▴ 220
0
votes
0
replies
2.2k
views
Comment:
Comment: Adapter content in FASTQ file
6 months ago by
opplatek
▴ 220
1
vote
1
reply
2.2k
views
Comment:
Comment: Adapter content in FASTQ file
7 months ago by
opplatek
▴ 220
1
vote
1
reply
4.6k
views
Comment:
Comment: Error: package or namespace load failed for ‘clusterProfiler’: object ‘get_fun_
7 months ago by
opplatek
▴ 220
1
vote
1
reply
824
views
Comment:
Comment: rRNA rate from RNA seq data- Qualimap
11 months ago by
opplatek
▴ 220
1
vote
1
reply
824
views
Answer:
Answer: rRNA rate from RNA seq data- Qualimap
11 months ago by
opplatek
▴ 220
0
votes
0
replies
824
views
Comment:
Comment: rRNA rate from RNA seq data- Qualimap
11 months ago by
opplatek
▴ 220
0
votes
0
replies
432
views
Comment:
Comment: RNA-SeQC
11 months ago by
opplatek
▴ 220
0
votes
0
replies
2.1k
views
Comment:
Comment: featureCounts --primary tag counting uniquely mapped reads and excludes multi-ma
11 months ago by
opplatek
▴ 220
1
vote
0
replies
2.5k
views
Comment:
Comment: Which Fasta file and GTF file to use in STAR alignment
14 months ago by
opplatek
▴ 220
2
votes
0
replies
2.5k
views
Comment:
Comment: Which Fasta file and GTF file to use in STAR alignment
14 months ago by
opplatek
▴ 220
0
votes
1
reply
1.7k
views
Comment:
Comment: Batch effects prevention
15 months ago by
opplatek
▴ 220
2
votes
0
replies
1.0k
views
Answer:
A: How to speed up computeMatrix of deeptools?
15 months ago by
opplatek
▴ 220
0
votes
1
reply
677
views
Comment:
C: SRA toolkit fastq files download error
16 months ago by
opplatek
▴ 220
0
votes
0
replies
805
views
Comment:
C: How to convert realign BAM file into fastq file
17 months ago by
opplatek
▴ 220
0
votes
0
replies
85k
views
Answer:
A: How To Split A Bam File By Chromosome
17 months ago by
opplatek
▴ 220
0
votes
0
replies
3.9k
views
Comment:
C: qualimap reported java.awt.AWTError: Can't connect to X11 window server
18 months ago by
opplatek
▴ 220
0
votes
0
replies
5.8k
views
Comment:
C: Gene set enrichment analysis with logFC and PValue
19 months ago by
opplatek
▴ 220
0
votes
0
replies
452
views
Comment:
C: Creating gtf file?
19 months ago by
opplatek
▴ 220
0
votes
1
reply
805
views
Answer:
A: How to convert realign BAM file into fastq file
19 months ago by
opplatek
▴ 220
0
votes
0
replies
805
views
Comment:
C: How to convert realign BAM file into fastq file
19 months ago by
opplatek
▴ 220
1
vote
0
replies
9.2k
views
Answer:
A: Unlisting lists inside data frame and collapsing their values in R
19 months ago by
opplatek
▴ 220
0
votes
0
replies
997
views
Comment:
C: Getting transcriptomic coordinates for CDS exons from a GTF
19 months ago by
opplatek
▴ 220
1
vote
1
reply
1.3k
views
Answer:
A: How to use Rsamtools to extracting reads map into single chromosome from BAM fil
21 months ago by
opplatek
▴ 220
0
votes
0
replies
2.8k
views
Answer:
A: Convert BLAT to GFF file?
2.5 years ago by
opplatek
▴ 220
0
votes
0
replies
43k
views
Comment:
C: How Can I Know The Length Of Mapped Reads From Bam File?
2.8 years ago by
opplatek
▴ 220
0
votes
0
replies
8.0k
views
Comment:
C: Remove Soft Clipped Bases
2.8 years ago by
opplatek
▴ 220
3
votes
1
reply
8.0k
views
Answer:
Answer: Remove Soft Clipped Bases
11 months ago by
opplatek
▴ 220
0
votes
0
replies
3.6k
views
Comment:
C: Fastx_toolkit with nanopore data
3.0 years ago by
opplatek
▴ 220
1
vote
0
replies
9.0k
views
Comment:
C: Automating Gorilla And/Or Revigo Analysis
4.0 years ago by
opplatek
▴ 220
1
vote
0
replies
3.2k
views
Answer:
A: Parsing augustus output
4.0 years ago by
opplatek
▴ 220
0
votes
1
reply
6.5k
views
Comment:
C: Filtering nth length from mapped SAM/BAM file.
5.3 years ago by
opplatek
▴ 220
1
vote
0
replies
7.7k
views
Comment:
C: Picard CollectRnaSeqMetrics error
5.6 years ago by
opplatek
▴ 220
0
votes
0
replies
4.4k
views
Comment:
C: miRDeep2.0.0.8 install error occured
5.6 years ago by
opplatek
▴ 220
1
vote
0
replies
3.7k
views
Answer:
A: Suggest Pirna Ngs Small Rna Analysis Pipelines/Workflows
6.1 years ago by
opplatek
▴ 220
0
votes
0
replies
2.1k
views
Answer:
Answer: Blat Clumptohsprange Error
updated 12 weeks ago by
Ram
36k • written 7.4 years ago by
opplatek
▴ 220
37 results • Page
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