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Comment:
Comment: How to download dbSNP153 vcf files in hg19/GRCH37 version
6 months ago by
Jautis
▴ 510
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521
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Comment:
Comment: Should I normalize the data before or after filtering to a particular cell type?
14 months ago by
Jautis
▴ 510
4
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443
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Comment:
Comment: Differntial Gene Expression analysis
14 months ago by
Jautis
▴ 510
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441
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Comment:
Comment: SNPs with multiple nucleotides
14 months ago by
Jautis
▴ 510
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1
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355
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Comment:
Comment: Capture Hi-C processing yields sparse matrices
14 months ago by
Jautis
▴ 510
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549
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Comment:
Comment: Alternatives to TMM normalization
14 months ago by
Jautis
▴ 510
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1.0k
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Comment:
Comment: single cell RNA-seq: Is there a way to tell if one dataset is more similar to an
16 months ago by
Jautis
▴ 510
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430
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Comment:
Comment: Can I do differential analysis without phenodata?
16 months ago by
Jautis
▴ 510
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1
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1.0k
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Comment:
Comment: single cell RNA-seq: Is there a way to tell if one dataset is more similar to an
16 months ago by
Jautis
▴ 510
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1.3k
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Comment:
Comment: Merge two vcf's, keep only intersection of REF/ALT alleles
16 months ago by
Jautis
▴ 510
1
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867
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Comment:
Comment: Error running smartpca from eigensoft: failed to create thread
17 months ago by
Jautis
▴ 510
0
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1
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867
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Comment:
Comment: Error running smartpca from eigensoft: failed to create thread
17 months ago by
Jautis
▴ 510
1
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0
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620
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Comment:
Comment: Finding a sequence
17 months ago by
Jautis
▴ 510
1
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1
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2.7k
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Comment:
Comment: fastqc html file
17 months ago by
Jautis
▴ 510
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1
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2.9k
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Comment:
Comment: multiqc could not generate results
17 months ago by
Jautis
▴ 510
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613
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Comment:
Comment: Conserved regions in multiple fasta files (multiple species)?
17 months ago by
Jautis
▴ 510
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2.7k
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Comment:
Comment: fastqc html file
17 months ago by
Jautis
▴ 510
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0
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827
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Comment:
Comment: Bam file: replace low quality bases with "N"
19 months ago by
Jautis
▴ 510
0
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1
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1.2k
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Comment:
Comment: limma+voom flips the sign of the effect from CPM?
20 months ago by
Jautis
▴ 510
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1
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1.2k
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Comment:
Comment: voom mean-variance plot has set of genes where variance increases with expressio
20 months ago by
Jautis
▴ 510
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1
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1.2k
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Comment:
Comment: voom mean-variance plot has set of genes where variance increases with expressio
20 months ago by
Jautis
▴ 510
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1.6k
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Comment:
Comment: unable to impute with beagle after filtering VCF table using vcftools
2.1 years ago by
Jautis
▴ 510
1
vote
1
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1.6k
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Comment:
Comment: unable to impute with beagle after filtering VCF table using vcftools
2.1 years ago by
Jautis
▴ 510
0
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0
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759
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Comment:
Comment: Could someone help me check what genomic position is this variant nomenclature r
2.1 years ago by
Jautis
▴ 510
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1
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2.3k
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Comment:
Comment: How to calculate percent coverage of each read for nanopore
2.1 years ago by
Jautis
▴ 510
1
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2.3k
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Comment:
Comment: How to calculate percent coverage of each read for nanopore
2.1 years ago by
Jautis
▴ 510
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1.2k
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Comment:
Comment: Cannot color cells with 0 expression in certain color
2.1 years ago by
Jautis
▴ 510
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3.9k
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Comment:
C: Calculating Tajima's D from SNP frequency data
2.3 years ago by
Jautis
▴ 510
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0
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3.5k
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Comment:
C: A strange R limma voom function mean-variance trend
2.4 years ago by
Jautis
▴ 510
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1.1k
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Comment:
C: Phasing non-human genomes with Beagle - do I need to divide subjects by populati
2.9 years ago by
Jautis
▴ 510
0
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1
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11k
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Comment:
C: How to remove a list of reads from fastq file?
3.0 years ago by
Jautis
▴ 510
0
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0
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1.5k
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Comment:
C: sed (or similar) command to remove part of the FORMAT from a vcf file?
3.3 years ago by
Jautis
▴ 510
0
votes
1
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12k
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Comment:
C: How to combine chromosome vcf files
3.3 years ago by
Jautis
▴ 510
0
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0
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2.4k
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Comment:
C: Phylogenetic distance betwee species
updated 3.5 years ago by
Ram
39k • written 7.5 years ago by
Jautis
▴ 510
2
votes
0
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4.3k
views
Comment:
C: Good Bioinformatics research papers
updated 3.5 years ago by
Ram
39k • written 7.5 years ago by
Jautis
▴ 510
0
votes
1
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3.2k
views
Comment:
C: Taking genotypes out of a vcf file
updated 3.6 years ago by
Ram
39k • written 7.8 years ago by
Jautis
▴ 510
0
votes
0
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11k
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Comment:
C: Calculating the bisulfite conversion rate
updated 3.6 years ago by
Ram
39k • written 7.9 years ago by
Jautis
▴ 510
0
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0
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1.5k
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Comment:
C: vcftools minDP filter not working for samtools genotype calling output
3.6 years ago by
Jautis
▴ 510
0
votes
2
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2.0k
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Comment:
C: Error in transferring annotations to a new assembly using RATT
4.4 years ago by
Jautis
▴ 510
0
votes
2
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2.0k
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Comment:
C: Error in transferring annotations to a new assembly using RATT
4.4 years ago by
Jautis
▴ 510
0
votes
0
replies
2.5k
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Comment:
C: GOseq with non-supported organism
4.8 years ago by
Jautis
▴ 510
0
votes
1
reply
1.2k
views
Comment:
C: Find chromosomal location of a scaffold
4.8 years ago by
Jautis
▴ 510
0
votes
1
reply
1.2k
views
Comment:
C: Find chromosomal location of a scaffold
4.8 years ago by
Jautis
▴ 510
0
votes
1
reply
3.3k
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Comment:
C: Convert an altered sam file into a bam file
5.4 years ago by
Jautis
▴ 510
0
votes
0
replies
1.1k
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Comment:
C: Genotype calls for a list of variable sites
5.6 years ago by
Jautis
▴ 510
1
vote
0
replies
6.1k
views
Comment:
C: Modifying fasta file based on vcf information
6.0 years ago by
Jautis
▴ 510
0
votes
1
reply
1.6k
views
Comment:
C: Outputting DP4 flag in GATK
6.2 years ago by
Jautis
▴ 510
0
votes
1
reply
1.4k
views
Comment:
C: Getting reads that end at a digest site from a sam/bam file
6.2 years ago by
Jautis
▴ 510
0
votes
0
replies
1.4k
views
Comment:
C: Getting reads that end at a digest site from a sam/bam file
6.2 years ago by
Jautis
▴ 510
0
votes
1
reply
1.4k
views
Comment:
C: Getting reads that end at a digest site from a sam/bam file
6.2 years ago by
Jautis
▴ 510
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