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Answer: A: Bismark Methyl-Seq Analysis
7.4 years ago by mark.ziemann ★ 1.9k
2
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1.8k
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Answer: A: Recommended program for evaluating aligner sensitivity
7.4 years ago by mark.ziemann ★ 1.9k
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3.2k
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Answer: A: Total RNA-seq miRNA detection query
7.4 years ago by mark.ziemann ★ 1.9k
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1.5k
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Answer: A: CNV tool for small sequences
7.4 years ago by mark.ziemann ★ 1.9k
3
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3.3k
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Answer: A: Why does RNA sequencing data has Thymine as opposed to Uracil? Theoretically, it
7.4 years ago by mark.ziemann ★ 1.9k
4
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Answer: A: An approach for gene ontology and up- / down-regulated genes (RNAseq)
8.4 years ago by mark.ziemann ★ 1.9k
3
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9.7k
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Answer: C: Problem with creating GSEA rank file
8.5 years ago by mark.ziemann ★ 1.9k
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4.1k
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Answer: A: DESeq without replicate nbinomTest method
8.5 years ago by mark.ziemann ★ 1.9k
2
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3.2k
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Answer: A: Is it ok to map RNA-seq reads on prokaryotic reference genome with bowtie2 ?
8.8 years ago by mark.ziemann ★ 1.9k
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2.5k
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Answer: Answer: Align long nanopore minion cDNA reads
updated 2.2 years ago by 44k • written 9.3 years ago by ★ 1.9k
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3.3k
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Answer: Answer: RNA-seq analysis without grouping data
updated 2.2 years ago by 44k • written 9.3 years ago by ★ 1.9k
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0
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2.7k
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Answer: Answer: Extracting certain gene sets from RNA data
updated 2.2 years ago by 44k • written 9.3 years ago by ★ 1.9k
4
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1
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5.2k
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Answer: Answer: combining multiple gz files in subfolders
updated 2.2 years ago by 44k • written 9.3 years ago by ★ 1.9k
3
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0
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4.7k
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Answer: Answer: Very short reads (20-22) , bowtie and tophat not doing gapped alignment
updated 2.1 years ago by 44k • written 9.4 years ago by ★ 1.9k
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2.4k
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Answer: Answer: Problem with bad quality bases in RNAseq
updated 2.1 years ago by 44k • written 9.4 years ago by ★ 1.9k
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1
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3.1k
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Answer: A: Differential expression in edgeR with cuffdiff count output
9.4 years ago by mark.ziemann ★ 1.9k
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0
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5.1k
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Answer: Answer: Problems with STAR mapping output
updated 24 months ago by 44k • written 9.4 years ago by ★ 1.9k
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1
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2.2k
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Answer: Answer: Strategies For De Novo Assembly Of A Reference
updated 23 months ago by 44k • written 9.4 years ago by ★ 1.9k
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0
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2.2k
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Answer: Answer: what is applications of gene ranking except GSEA?
updated 22 months ago by 44k • written 9.6 years ago by ★ 1.9k
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4.4k
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Answer: A: Comparing gene conservation across species
9.6 years ago by mark.ziemann ★ 1.9k
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2.9k
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Answer: A: Promoter Motifs (+) and (-) strands
9.6 years ago by mark.ziemann ★ 1.9k
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3.1k
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Answer: Answer: Get Allele Frequency of each SNP in RNASeq
updated 22 months ago by 44k • written 9.6 years ago by ★ 1.9k
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2.6k
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Answer: Answer: Finding ortholog transcript sequences after de novo transcriptome assembly
updated 22 months ago by 44k • written 9.6 years ago by ★ 1.9k
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2.7k
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Answer: Answer: JAVA and NGS
updated 22 months ago by 44k • written 9.6 years ago by ★ 1.9k
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0
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1.8k
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Answer: Answer: Getting BLAST Clusters Classifier performance for Protein classes
updated 22 months ago by 44k • written 9.6 years ago by ★ 1.9k
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0
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2.9k
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Answer: A: PSEA- protein set enrichment analsyis
9.6 years ago by mark.ziemann ★ 1.9k
2
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0
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1.9k
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Answer: Answer: look at expression by locus
updated 22 months ago by 44k • written 9.6 years ago by ★ 1.9k
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0
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2.3k
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Answer: Answer: Generate Simulated data for Differentially methylated regions (DMRs)
updated 22 months ago by 44k • written 9.6 years ago by ★ 1.9k
2
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1
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2.6k
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Answer: A: Transcriptome reconstruction from both short reads and long sequences
9.6 years ago by mark.ziemann ★ 1.9k
2
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0
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2.4k
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Answer: Answer: How to combine bisulfite sequencing data with Medip seq and/or MRE-seq
updated 22 months ago by 44k • written 9.6 years ago by ★ 1.9k
3
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0
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5.9k
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Answer: A: tRNA expression analysis from RNA-Seq
9.6 years ago by mark.ziemann ★ 1.9k
2
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1
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2.5k
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Answer: A: gene differential expression array analysis: weird pvalue distribution
9.6 years ago by mark.ziemann ★ 1.9k
1
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0
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1.9k
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Answer: Answer: Known transcription factor binding sites and enhancer locations in Pigs
updated 22 months ago by 44k • written 9.6 years ago by ★ 1.9k
1
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0
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5.6k
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Answer: Answer: z-Score vs fold enrichment
updated 22 months ago by 44k • written 9.6 years ago by ★ 1.9k
1
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1
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3.8k
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Answer: Answer: filter out low expressed RNA-seq genes using anova
updated 22 months ago by 44k • written 9.6 years ago by ★ 1.9k
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0
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2.7k
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Answer: Answer: How to compare multiple microarray samples of small RNA expression from myeloid
updated 22 months ago by 44k • written 9.6 years ago by ★ 1.9k
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0
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2.5k
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Answer: A: Compare sample RNA-seq data with publicly available micro-array data
9.6 years ago by mark.ziemann ★ 1.9k
0
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1
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2.0k
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Answer: Answer: Tblastx returning only 400 hits
updated 22 months ago by 44k • written 9.6 years ago by ★ 1.9k
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0
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4.7k
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Answer: A: Is "paired reads have different names" error due to ! at beginning of line in fa
9.6 years ago by mark.ziemann ★ 1.9k
0
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0
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4.7k
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Answer: Answer: bwa aln calculate SA coordinate issue
updated 2.4 years ago by 44k • written 9.6 years ago by ★ 1.9k
3
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2
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5.1k
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Answer: A: Get all the translation start site for human genome
9.6 years ago by mark.ziemann ★ 1.9k
0
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1
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24k
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Answer: Answer: check if two columns match in 2 annotation files and print those lines to a new
updated 2.4 years ago by 44k • written 9.6 years ago by ★ 1.9k
2
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0
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1.6k
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Answer: Answer: Dealing with sequencing data annotations
updated 2.4 years ago by 44k • written 9.6 years ago by ★ 1.9k
2
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0
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3.9k
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Answer: Answer: Bacterial identification - PCR primers - unknown target
updated 2.4 years ago by 44k • written 9.6 years ago by ★ 1.9k
0
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1
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5.9k
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Answer: Answer: bedtools getfasta does not give a proper fasta output
updated 2.4 years ago by 44k • written 9.6 years ago by ★ 1.9k
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0
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2.5k
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Answer: Answer: Tissue specific major transcript expressed?
updated 2.4 years ago by 44k • written 9.6 years ago by ★ 1.9k
1
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1
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1.8k
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Answer: Answer: The hard way?
updated 2.4 years ago by 44k • written 9.6 years ago by ★ 1.9k
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0
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2.1k
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Answer: Answer: How to get gene names from tophat results
updated 2.4 years ago by 44k • written 9.6 years ago by ★ 1.9k
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0
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2.0k
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Answer: A: 5'adaptor trimming of microRNA sequence data
9.6 years ago by mark.ziemann ★ 1.9k
1
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1
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2.4k
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Answer: Answer: samll RNA-seq data preproccess （ clipping the adapter sequences, removing read
updated 2.4 years ago by 44k • written 9.6 years ago by ★ 1.9k
110 results • Page 2 of 3
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