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Comment: C: Chloroplast genome: Need to close 2 gaps (~2Kbp), any suggestions?
7.3 years ago by mark.ziemann ★ 1.9k
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Comment: C: Filtering DMRs
7.3 years ago by mark.ziemann ★ 1.9k
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4.1k
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Comment: C: DESeq without replicate nbinomTest method
8.1 years ago by mark.ziemann ★ 1.9k
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5.8k
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Comment: C: GSEA for RNA seq
8.3 years ago by mark.ziemann ★ 1.9k
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1.8k
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Comment: C: Determining Fold Enrichment of TFBS Over Control Sequences
8.3 years ago by mark.ziemann ★ 1.9k
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2.0k
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Comment: C: Co-variants in differential expression analysis
8.3 years ago by mark.ziemann ★ 1.9k
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1.6k
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Comment: C: Mapping reads for gap closure in de novo assembly
8.3 years ago by mark.ziemann ★ 1.9k
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11k
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Comment: C: Bwa-Meth: Align And Tabulate Bs-Seq Reads
8.3 years ago by mark.ziemann ★ 1.9k
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1.7k
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Comment: C: best microRNA normalisation method
8.5 years ago by mark.ziemann ★ 1.9k
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3.5k
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Comment: C: troubleshooting bowtie2 low mapping rates
8.6 years ago by mark.ziemann ★ 1.9k
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3.5k
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Comment: C: troubleshooting bowtie2 low mapping rates
8.6 years ago by mark.ziemann ★ 1.9k
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1
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3.5k
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Comment: C: troubleshooting bowtie2 low mapping rates
8.6 years ago by mark.ziemann ★ 1.9k
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18k
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Comment: C: GSEA Preranked analysis on RNA-SEQ
8.8 years ago by mark.ziemann ★ 1.9k
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1
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18k
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Comment: C: GSEA Preranked analysis on RNA-SEQ
8.8 years ago by mark.ziemann ★ 1.9k
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5.1k
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Comment: C: Removing low complexity reads from RNA-seq
9.1 years ago by mark.ziemann ★ 1.9k
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5.1k
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Comment: C: Removing low complexity reads from RNA-seq
9.1 years ago by mark.ziemann ★ 1.9k
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3.4k
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Comment: C: Counting reads for gene transcripts with overlapping loci
9.2 years ago by mark.ziemann ★ 1.9k
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2.3k
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Comment: C: How can i retrieve all cds from a ensembl genetree？
9.2 years ago by mark.ziemann ★ 1.9k
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2.5k
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Comment: Comment: Determine mutational profile from a BAM file?
updated 20 months ago by 44k • written 9.3 years ago by ★ 1.9k
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2.9k
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Comment: Comment: Question: How to compare the gene expression signature of Primary tumor cell and
updated 19 months ago by 44k • written 9.3 years ago by ★ 1.9k
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2.6k
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Comment: Comment: Transcriptome reconstruction from both short reads and long sequences
updated 19 months ago by 44k • written 9.3 years ago by ★ 1.9k
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1.9k
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Comment: C: smallRNA-seq data for normal bone marrow in Human
9.3 years ago by mark.ziemann ★ 1.9k
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1
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2.9k
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Comment: C: Question: How to compare the gene expression signature of Primary tumor cell and
9.3 years ago by mark.ziemann ★ 1.9k
2
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3.8k
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Comment: C: Linc and miRNA in GTF file
9.3 years ago by mark.ziemann ★ 1.9k
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1
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1.8k
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Comment: Comment: The hard way?
updated 2.2 years ago by 44k • written 9.4 years ago by ★ 1.9k
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2.2k
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Comment: Comment: Annotation of miRNA targets
updated 2.2 years ago by 44k • written 9.4 years ago by ★ 1.9k
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1
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2.3k
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Comment: Comment: samll RNA-seq data preproccess （ clipping the adapter sequences, removing read
updated 2.2 years ago by 44k • written 9.4 years ago by ★ 1.9k
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1
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4.5k
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Comment: C: Count read with summarizeOverlaps result 0 for all sample
9.4 years ago by mark.ziemann ★ 1.9k
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1
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4.5k
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Comment: C: Count read with summarizeOverlaps result 0 for all sample
9.4 years ago by mark.ziemann ★ 1.9k
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1.5k
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Comment: C: I am trying to find the homologs on ion channel genes in the sponge phylum.
9.4 years ago by mark.ziemann ★ 1.9k
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2.2k
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Comment: Comment: Identify common genes and their respective DNA sequences
updated 2.2 years ago by 44k • written 9.4 years ago by ★ 1.9k
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4.2k
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Comment: C: Precursor identification of mature miRNA
9.4 years ago by mark.ziemann ★ 1.9k
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1
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4.2k
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Comment: Comment: Precursor identification of mature miRNA
updated 2.2 years ago by 44k • written 9.4 years ago by ★ 1.9k
2
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1
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18k
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Comment: C: GSEA Preranked analysis on RNA-SEQ
9.4 years ago by mark.ziemann ★ 1.9k
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0
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2.8k
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Comment: Comment: Mapping Issues with Bowtie2
updated 2.2 years ago by 44k • written 9.4 years ago by ★ 1.9k
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18k
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Comment: C: bwa mem vs bwa aln
9.4 years ago by mark.ziemann ★ 1.9k
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0
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2.8k
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Comment: C: CNV by read_depth approach
9.5 years ago by mark.ziemann ★ 1.9k
1
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0
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5.0k
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Comment: C: Integrating HTSeq count data of different samples
9.5 years ago by mark.ziemann ★ 1.9k
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1
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3.9k
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Comment: C: Human Genome reference
9.5 years ago by mark.ziemann ★ 1.9k
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1
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2.8k
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Comment: Comment: Blastn command line results -- bad alignments but high scores
updated 2.3 years ago by 44k • written 9.5 years ago by ★ 1.9k
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5.3k
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Comment: C: get a bed file from a blast result
9.5 years ago by mark.ziemann ★ 1.9k
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0
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7.3k
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Comment: Comment: how to perform Kolmogorov-Smirnov statistic in GSEA in R?
updated 2.3 years ago by 44k • written 9.5 years ago by ★ 1.9k
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1
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7.3k
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Comment: C: how to perform Kolmogorov-Smirnov statistic in GSEA in R?
9.5 years ago by mark.ziemann ★ 1.9k
1
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1
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7.3k
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Comment: C: how to perform Kolmogorov-Smirnov statistic in GSEA in R?
9.5 years ago by mark.ziemann ★ 1.9k
1
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0
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3.2k
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Comment: C: what is the difference between reference genome sequence from UCSC and ensembl ?
9.5 years ago by mark.ziemann ★ 1.9k
95 results • Page 2 of 2
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