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1.9k
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Comment:
C: Chloroplast genome: Need to close 2 gaps (~2Kbp), any suggestions?
7.3 years ago by
mark.ziemann
★ 1.9k
0
votes
0
replies
1.5k
views
Comment:
C: Filtering DMRs
7.3 years ago by
mark.ziemann
★ 1.9k
0
votes
1
reply
4.1k
views
Comment:
C: DESeq without replicate nbinomTest method
8.1 years ago by
mark.ziemann
★ 1.9k
2
votes
0
replies
5.8k
views
Comment:
C: GSEA for RNA seq
8.3 years ago by
mark.ziemann
★ 1.9k
0
votes
0
replies
1.8k
views
Comment:
C: Determining Fold Enrichment of TFBS Over Control Sequences
8.3 years ago by
mark.ziemann
★ 1.9k
0
votes
0
replies
2.0k
views
Comment:
C: Co-variants in differential expression analysis
8.3 years ago by
mark.ziemann
★ 1.9k
0
votes
0
replies
1.6k
views
Comment:
C: Mapping reads for gap closure in de novo assembly
8.3 years ago by
mark.ziemann
★ 1.9k
0
votes
0
replies
11k
views
Comment:
C: Bwa-Meth: Align And Tabulate Bs-Seq Reads
8.3 years ago by
mark.ziemann
★ 1.9k
0
votes
1
reply
1.7k
views
Comment:
C: best microRNA normalisation method
8.5 years ago by
mark.ziemann
★ 1.9k
1
vote
1
reply
3.5k
views
Comment:
C: troubleshooting bowtie2 low mapping rates
8.6 years ago by
mark.ziemann
★ 1.9k
0
votes
1
reply
3.5k
views
Comment:
C: troubleshooting bowtie2 low mapping rates
8.6 years ago by
mark.ziemann
★ 1.9k
0
votes
1
reply
3.5k
views
Comment:
C: troubleshooting bowtie2 low mapping rates
8.6 years ago by
mark.ziemann
★ 1.9k
0
votes
0
replies
18k
views
Comment:
C: GSEA Preranked analysis on RNA-SEQ
8.8 years ago by
mark.ziemann
★ 1.9k
1
vote
1
reply
18k
views
Comment:
C: GSEA Preranked analysis on RNA-SEQ
8.8 years ago by
mark.ziemann
★ 1.9k
1
vote
0
replies
5.1k
views
Comment:
C: Removing low complexity reads from RNA-seq
9.1 years ago by
mark.ziemann
★ 1.9k
0
votes
1
reply
5.1k
views
Comment:
C: Removing low complexity reads from RNA-seq
9.1 years ago by
mark.ziemann
★ 1.9k
0
votes
1
reply
3.4k
views
Comment:
C: Counting reads for gene transcripts with overlapping loci
9.2 years ago by
mark.ziemann
★ 1.9k
0
votes
0
replies
2.3k
views
Comment:
C: How can i retrieve all cds from a ensembl genetree?
9.2 years ago by
mark.ziemann
★ 1.9k
0
votes
0
replies
2.5k
views
Comment:
Comment: Determine mutational profile from a BAM file?
updated 20 months ago by
Ram
44k • written 9.3 years ago by
mark.ziemann
★ 1.9k
0
votes
0
replies
2.9k
views
Comment:
Comment: Question: How to compare the gene expression signature of Primary tumor cell and
updated 19 months ago by
Ram
44k • written 9.3 years ago by
mark.ziemann
★ 1.9k
0
votes
0
replies
2.6k
views
Comment:
Comment: Transcriptome reconstruction from both short reads and long sequences
updated 19 months ago by
Ram
44k • written 9.3 years ago by
mark.ziemann
★ 1.9k
0
votes
0
replies
1.9k
views
Comment:
C: smallRNA-seq data for normal bone marrow in Human
9.3 years ago by
mark.ziemann
★ 1.9k
0
votes
1
reply
2.9k
views
Comment:
C: Question: How to compare the gene expression signature of Primary tumor cell and
9.3 years ago by
mark.ziemann
★ 1.9k
2
votes
0
replies
3.8k
views
Comment:
C: Linc and miRNA in GTF file
9.3 years ago by
mark.ziemann
★ 1.9k
0
votes
1
reply
1.8k
views
Comment:
Comment: The hard way?
updated 2.2 years ago by
Ram
44k • written 9.4 years ago by
mark.ziemann
★ 1.9k
0
votes
0
replies
2.2k
views
Comment:
Comment: Annotation of miRNA targets
updated 2.2 years ago by
Ram
44k • written 9.4 years ago by
mark.ziemann
★ 1.9k
0
votes
1
reply
2.3k
views
Comment:
Comment: samll RNA-seq data preproccess ( clipping the adapter sequences, removing read
updated 2.2 years ago by
Ram
44k • written 9.4 years ago by
mark.ziemann
★ 1.9k
0
votes
1
reply
4.5k
views
Comment:
C: Count read with summarizeOverlaps result 0 for all sample
9.4 years ago by
mark.ziemann
★ 1.9k
0
votes
1
reply
4.5k
views
Comment:
C: Count read with summarizeOverlaps result 0 for all sample
9.4 years ago by
mark.ziemann
★ 1.9k
0
votes
0
replies
1.5k
views
Comment:
C: I am trying to find the homologs on ion channel genes in the sponge phylum.
9.4 years ago by
mark.ziemann
★ 1.9k
0
votes
0
replies
2.2k
views
Comment:
Comment: Identify common genes and their respective DNA sequences
updated 2.2 years ago by
Ram
44k • written 9.4 years ago by
mark.ziemann
★ 1.9k
0
votes
0
replies
4.2k
views
Comment:
C: Precursor identification of mature miRNA
9.4 years ago by
mark.ziemann
★ 1.9k
0
votes
1
reply
4.2k
views
Comment:
Comment: Precursor identification of mature miRNA
updated 2.2 years ago by
Ram
44k • written 9.4 years ago by
mark.ziemann
★ 1.9k
2
votes
1
reply
18k
views
Comment:
C: GSEA Preranked analysis on RNA-SEQ
9.4 years ago by
mark.ziemann
★ 1.9k
0
votes
0
replies
2.8k
views
Comment:
Comment: Mapping Issues with Bowtie2
updated 2.2 years ago by
Ram
44k • written 9.4 years ago by
mark.ziemann
★ 1.9k
1
vote
0
replies
18k
views
Comment:
C: bwa mem vs bwa aln
9.4 years ago by
mark.ziemann
★ 1.9k
0
votes
0
replies
2.8k
views
Comment:
C: CNV by read_depth approach
9.5 years ago by
mark.ziemann
★ 1.9k
1
vote
0
replies
5.0k
views
Comment:
C: Integrating HTSeq count data of different samples
9.5 years ago by
mark.ziemann
★ 1.9k
0
votes
1
reply
3.9k
views
Comment:
C: Human Genome reference
9.5 years ago by
mark.ziemann
★ 1.9k
0
votes
1
reply
2.8k
views
Comment:
Comment: Blastn command line results -- bad alignments but high scores
updated 2.3 years ago by
Ram
44k • written 9.5 years ago by
mark.ziemann
★ 1.9k
0
votes
0
replies
5.3k
views
Comment:
C: get a bed file from a blast result
9.5 years ago by
mark.ziemann
★ 1.9k
0
votes
0
replies
7.3k
views
Comment:
Comment: how to perform Kolmogorov-Smirnov statistic in GSEA in R?
updated 2.3 years ago by
Ram
44k • written 9.5 years ago by
mark.ziemann
★ 1.9k
1
vote
1
reply
7.3k
views
Comment:
C: how to perform Kolmogorov-Smirnov statistic in GSEA in R?
9.5 years ago by
mark.ziemann
★ 1.9k
1
vote
1
reply
7.3k
views
Comment:
C: how to perform Kolmogorov-Smirnov statistic in GSEA in R?
9.5 years ago by
mark.ziemann
★ 1.9k
1
vote
0
replies
3.2k
views
Comment:
C: what is the difference between reference genome sequence from UCSC and ensembl ?
9.5 years ago by
mark.ziemann
★ 1.9k
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