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618
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Comment:
Comment: Junior Research Software Engineer/ Research Software Engineer - web resources fo
8 weeks ago by
Joseph Hughes
★ 3.0k
0
votes
1
reply
836
views
Comment:
Comment: Retrieving the corresponding Haplotype CDS from Ensembl
2.9 years ago by
Joseph Hughes
★ 3.0k
0
votes
0
replies
643
views
Comment:
C: How to download sequence of a protein from all available species from NCBI?
3.4 years ago by
Joseph Hughes
★ 3.0k
1
vote
0
replies
739
views
Comment:
C: Do I need to search for the complementary sequence when using regex?
3.4 years ago by
Joseph Hughes
★ 3.0k
0
votes
0
replies
2.8k
views
Comment:
C: How to download an alignment from TreeBase according to accession numbers
updated 4.4 years ago by
Ram
44k • written 10.0 years ago by
Joseph Hughes
★ 3.0k
0
votes
1
reply
2.0k
views
Comment:
C: Is there a good reason for multi-locus phylogeny when there is PHT conflict?
updated 4.4 years ago by
Ram
44k • written 10.0 years ago by
Joseph Hughes
★ 3.0k
1
vote
0
replies
5.9k
views
Comment:
C: Analysis Of Short Tandem Repeats/Trinucleotides In Ngs Data -- Revisited
updated 4.4 years ago by
Ram
44k • written 10.0 years ago by
Joseph Hughes
★ 3.0k
0
votes
0
replies
49k
views
Comment:
C: Reference Assembly - Mapping Reads To A Reference Genome
updated 4.4 years ago by
Ram
44k • written 10.0 years ago by
Joseph Hughes
★ 3.0k
0
votes
0
replies
9.1k
views
Comment:
C: R functions that extract the ORF from a sequence
updated 4.5 years ago by
Ram
44k • written 8.6 years ago by
Joseph Hughes
★ 3.0k
0
votes
0
replies
3.8k
views
Comment:
C: Using Ensembl API to get a Gene ID from a protein ID
updated 4.5 years ago by
Ram
44k • written 8.8 years ago by
Joseph Hughes
★ 3.0k
0
votes
1
reply
3.8k
views
Comment:
C: Using Ensembl API to get a Gene ID from a protein ID
updated 4.5 years ago by
Ram
44k • written 8.8 years ago by
Joseph Hughes
★ 3.0k
0
votes
1
reply
3.8k
views
Comment:
C: Using Ensembl API to get a Gene ID from a protein ID
updated 4.5 years ago by
Ram
44k • written 8.8 years ago by
Joseph Hughes
★ 3.0k
0
votes
2
replies
12k
views
Comment:
C: Draw Minimum Spanning Tree (Mst) With Pie Charts In R
updated 4.9 years ago by
Ram
44k • written 12.1 years ago by
Joseph Hughes
★ 3.0k
0
votes
1
reply
1.7k
views
Comment:
C: Is there a way to calculate the maximum length at which the frequencies of k-mer
5.0 years ago by
Joseph Hughes
★ 3.0k
1
vote
0
replies
4.5k
views
Comment:
C: How to give merged reads as input in spades
5.3 years ago by
Joseph Hughes
★ 3.0k
0
votes
2
replies
1.3k
views
Comment:
C: How to submit a Pilon fasta output to the RAST annotation service using Shell or
5.3 years ago by
Joseph Hughes
★ 3.0k
0
votes
0
replies
1.1k
views
Comment:
C: Assembling ESTs and illumina reads
5.3 years ago by
Joseph Hughes
★ 3.0k
2
votes
0
replies
2.5k
views
Comment:
C: Method for creating an EMBL formatted annotated sequence?
6.3 years ago by
Joseph Hughes
★ 3.0k
0
votes
0
replies
3.6k
views
Comment:
C: How to build an NJ tree with an IBS distance matrix computed by PLINK?
6.3 years ago by
Joseph Hughes
★ 3.0k
0
votes
0
replies
7.6k
views
Comment:
C: kraken: unable to download the databases from ncbi
6.3 years ago by
Joseph Hughes
★ 3.0k
0
votes
0
replies
2.5k
views
Comment:
C: LoFreq outputing no SNP?
6.3 years ago by
Joseph Hughes
★ 3.0k
1
vote
0
replies
1.4k
views
Comment:
C: Bacterial known pathway - the easiest way to find and download 1:1 orthologs to
6.3 years ago by
Joseph Hughes
★ 3.0k
0
votes
0
replies
2.2k
views
Comment:
C: To get the name of the strains by searching assembly genome number GCF_
6.3 years ago by
Joseph Hughes
★ 3.0k
0
votes
0
replies
3.6k
views
Comment:
C: How to retrieve nucleotid sequence from gene ids of ncbis "gene" data base?
6.3 years ago by
Joseph Hughes
★ 3.0k
0
votes
0
replies
1.2k
views
Comment:
C: Parameter to check atleast 75% consensus of each nucleotide
6.3 years ago by
Joseph Hughes
★ 3.0k
0
votes
0
replies
3.7k
views
Comment:
C: Distance matrix plot issue
6.8 years ago by
Joseph Hughes
★ 3.0k
0
votes
0
replies
1.4k
views
Comment:
C: Adaptors Sequences and Trimming
6.8 years ago by
Joseph Hughes
★ 3.0k
0
votes
0
replies
5.3k
views
Comment:
C: Viewing chimeric reads on IGV
7.3 years ago by
Joseph Hughes
★ 3.0k
0
votes
0
replies
1.8k
views
Comment:
C: Comparing unequal trees
7.3 years ago by
Joseph Hughes
★ 3.0k
0
votes
0
replies
1.9k
views
Comment:
C: Get pairwise scores from alignment without re-aligning?
7.4 years ago by
Joseph Hughes
★ 3.0k
0
votes
0
replies
1.4k
views
Comment:
C: Download SRA files for a specific Transcription factor (e.g GATA3) from GEO
7.5 years ago by
Joseph Hughes
★ 3.0k
0
votes
0
replies
6.7k
views
Comment:
C: What is the most suitable file format for storing sequence alignments and associ
7.6 years ago by
Joseph Hughes
★ 3.0k
0
votes
0
replies
6.7k
views
Comment:
C: What is the most popular file format for storing sequence alignments and associa
7.6 years ago by
Joseph Hughes
★ 3.0k
0
votes
3
replies
6.7k
views
Comment:
C: What is the most popular file format for storing sequence alignments and associa
7.6 years ago by
Joseph Hughes
★ 3.0k
0
votes
0
replies
2.3k
views
Comment:
C: repeated read ids from Illumina MiniSeq fastq.gz files?
7.7 years ago by
Joseph Hughes
★ 3.0k
2
votes
0
replies
1.8k
views
Comment:
C: combining p values meta analysis
7.7 years ago by
Joseph Hughes
★ 3.0k
0
votes
0
replies
3.6k
views
Comment:
A: metaViC: Virus metagenomics pipeline for unknown host or in absence of a host ge
7.7 years ago by
Joseph Hughes
★ 3.0k
0
votes
0
replies
2.4k
views
Comment:
C: How to retrieve the paralogues for a limited taxonomic group
8.1 years ago by
Joseph Hughes
★ 3.0k
0
votes
2
replies
2.4k
views
Comment:
C: How to retrieve the paralogues for a limited taxonomic group
8.1 years ago by
Joseph Hughes
★ 3.0k
2
votes
0
replies
3.1k
views
Comment:
C: Segregatin sites per nucleotide, Watterson Estimator, Nucleotide Diversity
8.3 years ago by
Joseph Hughes
★ 3.0k
0
votes
1
reply
3.8k
views
Comment:
Comment: Using Ensembl API to get a Gene ID from a protein ID
updated 19 months ago by
Ram
44k • written 8.8 years ago by
Joseph Hughes
★ 3.0k
1
vote
1
reply
49k
views
Comment:
C: Reference Assembly - Mapping Reads To A Reference Genome
9.0 years ago by
Joseph Hughes
★ 3.0k
0
votes
0
replies
3.9k
views
Comment:
C: Parsing Protein Trees to determine orthologs and paralogs
10.0 years ago by
Joseph Hughes
★ 3.0k
0
votes
0
replies
2.2k
views
Comment:
C: Raxml (Residues Read In Sequence)
10.1 years ago by
Joseph Hughes
★ 3.0k
0
votes
1
reply
2.2k
views
Comment:
C: Raxml (Residues Read In Sequence)
10.1 years ago by
Joseph Hughes
★ 3.0k
0
votes
1
reply
10k
views
Comment:
C: What Is The Best Search Engine To Use In Repeatmasker?
10.2 years ago by
Joseph Hughes
★ 3.0k
0
votes
0
replies
2.5k
views
Comment:
C: Neighbor Joining Trees Using Stacks Output - Phylip File
10.3 years ago by
Joseph Hughes
★ 3.0k
0
votes
0
replies
2.8k
views
Comment:
C: #Reads Per Contig Information From Assemblies Other Than Velvet
10.3 years ago by
Joseph Hughes
★ 3.0k
0
votes
1
reply
3.4k
views
Comment:
C: What Software Can Be Used To Attempt To Improve An Assembly By Filling Targeted
10.4 years ago by
Joseph Hughes
★ 3.0k
2
votes
0
replies
2.8k
views
Comment:
C: Classify Type Of Amino Acid Transitions (Acidic/Basic) Based On Their Mutations
10.4 years ago by
Joseph Hughes
★ 3.0k
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