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Interpretation of control strip and beta density plots for Illumina methylation array data using minFi
R minfi Illumina EPIC methylation array
updated 5.8 years ago by ▴ 30 • written 7.2 years ago by ▴ 90
0
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0
replies
4.1k
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Comment: C: Anyone used BAMSurgeon to spike in 1KB insertions/deletions?
updated 5.9 years ago by 45k • written 9.9 years ago by ▴ 90
5
votes
4
replies
4.8k
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Somatic indel calling with Pindel
pindel somatic-indels
updated 2.8 years ago by 45k • written 10.2 years ago by ▴ 90
6
votes
6
replies
3.9k
views
No Somatic SNV Calling with GATK?
SNP
updated 2.7 years ago by 45k • written 10.4 years ago by ▴ 90
3
votes
3
replies
4.1k
views
Anyone used BAMSurgeon to spike in 1KB insertions/deletions?
bam bamsurgeon genome svs
updated 3.0 years ago by 45k • written 10.0 years ago by ▴ 90
0
votes
1
reply
3.9k
views
Comment: Comment: No Somatic SNV Calling with GATK?
updated 2.7 years ago by 45k • written 10.4 years ago by ▴ 90
1
vote
2
replies
2.2k
views
Using SomaticSniper to call variants in specific regions?
snp genome next-gen-sequencing
updated 3.3 years ago by 45k • written 10.5 years ago by ▴ 90
0
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0
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2.2k
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Comment: C: Using SomaticSniper to call variants in specific regions?
10.5 years ago by sichan ▴ 90
1
vote
6
replies
3.6k
views
Which Somatic SNP Callers to Benchmark?
snp next-gen Assembly
updated 3.3 years ago by 45k • written 10.5 years ago by ▴ 90
0
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0
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9.7k
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Comment: Comment: Comparing Genotypes from NA12878 to that of her parents (NA12891 and NA12892)
updated 3.4 years ago by 45k • written 10.6 years ago by ▴ 90
8
votes
5
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9.7k
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Comparing Genotypes from NA12878 to that of her parents (NA12891 and NA12892)
SNP next-gen genome
updated 3.4 years ago by 45k • written 10.6 years ago by ▴ 90
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