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Comment: Comment: Please help me understand linkage disequilibrium
4.0 years ago by i.sudbery 22k
3
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1.6k
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Answer: Answer: Kallisto Bootstrapping and deseq2
4.1 years ago by i.sudbery 22k
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3.0k
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Answer: Answer: Searching for mRNA ending with a specific 3' pattern in NON-poly-A RNASeq data.
4.1 years ago by i.sudbery 22k
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Comment: Comment: Searching for mRNA ending with a specific 3' pattern in NON-poly-A RNASeq data.
4.1 years ago by i.sudbery 22k
4
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2.4k
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Answer: Answer: WES data analysis with UMI barcode
4.1 years ago by i.sudbery 22k
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10k
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Comment: Comment: Normalization and differential analysis in ATAC-seq data
4.1 years ago by i.sudbery 22k
6
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4.1k
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Answer: Answer: Please help me understand linkage disequilibrium
4.1 years ago by i.sudbery 22k
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6.1k
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Comment: Comment: Output of samtools view, what does the third column actually represent?
4.1 years ago by i.sudbery 22k
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1
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6.1k
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Comment: Comment: Output of samtools view, what does the third column actually represent?
4.1 years ago by i.sudbery 22k
1
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0
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6.1k
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Comment: Comment: Output of samtools view, what does the third column actually represent?
4.1 years ago by i.sudbery 22k
0
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6.1k
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Comment: Comment: Output of samtools view, what does the third column actually represent?
4.1 years ago by i.sudbery 22k
2
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1
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6.1k
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Comment: Comment: Output of samtools view, what does the third column actually represent?
4.1 years ago by i.sudbery 22k
3
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1
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6.1k
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Answer: Answer: Output of samtools view, what does the third column actually represent?
updated 4.1 years ago by 45k • written 4.1 years ago by 22k
0
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1
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1.6k
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Comment: Comment: Handle inflated log2FC while using interaction term in DESeq2
4.1 years ago by i.sudbery 22k
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1.6k
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Comment: Comment: Handle inflated log2FC while using interaction term in DESeq2
4.1 years ago by i.sudbery 22k
4
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1
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1.3k
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Answer: Answer: Transcriptional noise detection and Salmon TPMs
4.1 years ago by i.sudbery 22k
3
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1
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1.5k
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Answer: Answer: Can I remove the control in differential expression analysis?
4.1 years ago by i.sudbery 22k
1
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0
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1.7k
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Answer: Answer: Pipeline version control system, pipeline storage
4.1 years ago by i.sudbery 22k
0
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0
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1.2k
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Answer: Answer: normalization two different datasets tcga vs gtex
4.1 years ago by i.sudbery 22k
1
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0
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4.4k
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Comment: Comment: Highly used R packages with no Python equivalent
4.2 years ago by i.sudbery 22k
0
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0
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1.7k
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Comment: Comment: Why does Txdb transcript length not always match to transcript end-start positio
4.2 years ago by i.sudbery 22k
5
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2
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4.4k
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Answer: Answer: Highly used R packages with no Python equivalent
4.2 years ago by i.sudbery 22k
2
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1
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1.7k
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Answer: Answer: Why does Txdb transcript length not always match to transcript end-start positio
4.2 years ago by i.sudbery 22k
3
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1
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4.4k
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Answer: Answer: UMI counts and read counts in GeneGlobe output
4.2 years ago by i.sudbery 22k
0
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0
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1.5k
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Comment: Comment: What does betaPrior do in DESEQ?
4.2 years ago by i.sudbery 22k
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0
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5.6k
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Comment: Comment: Filtering sam/bam by using CIGAR deletion sites
4.2 years ago by i.sudbery 22k
1
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0
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2.8k
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Comment: Comment: How to use Poisson distribution to get meaningful expression counts?
4.2 years ago by i.sudbery 22k
15
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1
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9.9k
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Answer: Answer: Conda, bioconda, anaconda, are they different?
4.2 years ago by i.sudbery 22k
1
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0
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2.9k
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Comment: Comment: How can read-count from BAM file be greater than than from fastq file?
4.2 years ago by i.sudbery 22k
2
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0
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1.5k
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Answer: Answer: Understanding the number of intersection in bedtools jaccard
4.2 years ago by i.sudbery 22k
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0
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2.5k
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Comment: Comment: RNA variant calling, aligned with HiSat2
4.2 years ago by i.sudbery 22k
5
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2
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2.9k
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Answer: Answer: How can read-count from BAM file be greater than than from fastq file?
4.2 years ago by i.sudbery 22k
1
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1
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2.8k
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Comment: Comment: How to use Poisson distribution to get meaningful expression counts?
4.2 years ago by i.sudbery 22k
1
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1
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2.8k
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Comment: Comment: How to use Poisson distribution to get meaningful expression counts?
4.2 years ago by i.sudbery 22k
3
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0
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4.4k
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Answer: Answer: Missing gene symbol
4.2 years ago by i.sudbery 22k
1
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1
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1.4k
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Answer: Answer: FPKM for TMM
4.3 years ago by i.sudbery 22k
0
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1
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1.5k
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Comment: Comment: Why are there nucleotides in the reference genome which are also minor alleles i
4.3 years ago by i.sudbery 22k
0
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0
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2.0k
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Comment: Comment: Ensembl Highlighted Exons Don't Match Coordinates
4.3 years ago by i.sudbery 22k
0
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0
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2.0k
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Comment: Comment: Ensembl Highlighted Exons Don't Match Coordinates
4.3 years ago by i.sudbery 22k
3
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1
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3.3k
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Answer: Answer: how to convert to computational biology from bioinformatics
4.3 years ago by i.sudbery 22k
0
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1
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2.0k
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Comment: Comment: Ensembl Highlighted Exons Don't Match Coordinates
4.3 years ago by i.sudbery 22k
0
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0
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3.5k
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Comment: Comment: the relationship of ATAC-seq and H3K27ac
4.3 years ago by i.sudbery 22k
0
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0
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3.5k
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Comment: Comment: DESeq2 model matrix not full rank
4.3 years ago by i.sudbery 22k
3
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1
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1.5k
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Answer: Answer: Intrinsically disordered region(IDR) or Intrinsically disordered Protein(IDP)
4.3 years ago by i.sudbery 22k
9
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2
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3.5k
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Answer: Answer: DESeq2 model matrix not full rank
4.3 years ago by i.sudbery 22k
0
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0
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3.1k
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Comment: Comment: How to create a proper design matrix/contrast matrix for methylation 850k analys
4.3 years ago by i.sudbery 22k
0
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0
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2.7k
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Comment: Comment: Should we keep only the uniquely mapped reads for gene expression
4.3 years ago by i.sudbery 22k
0
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1
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2.7k
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Comment: Comment: Should we keep only the uniquely mapped reads for gene expression
4.3 years ago by i.sudbery 22k
1
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0
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1.9k
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Comment: Comment: To retrieve the transcript from gff file with the longest isoform
4.3 years ago by i.sudbery 22k
0
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0
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805
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Comment: Comment: How to find conserved enhancers between human cell lines?
4.3 years ago by i.sudbery 22k
1,719 results • Page 14 of 35
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