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3
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1
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4.6k
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Answer: A: Generate gene level TPM from quant.sf file generated in salmon
6.2 years ago by i.sudbery 22k
1
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0
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1.0k
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Comment: C: Difference in the percentage of reads falling into intronic and coding regions
6.2 years ago by i.sudbery 22k
3
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1
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1.5k
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Answer: A: Can I take 'organ type' as a batch effect and use ComBat to remove organ depende
6.2 years ago by i.sudbery 22k
2
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0
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1.4k
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Answer: C: How to define psychiatric disorder patients from GTEx?
6.2 years ago by i.sudbery 22k
1
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0
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6.6k
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Comment: C: Python and SLURM environment : clarifications needed
6.2 years ago by i.sudbery 22k
0
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1
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6.6k
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Comment: C: Python and SLURM environment : clarifications needed
6.2 years ago by i.sudbery 22k
1
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0
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1.4k
views
Answer: A: Differential Gene Expression Analysis Suggestions
6.2 years ago by i.sudbery 22k
0
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0
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2.2k
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Comment: C: Can you choose minimum transcript coverage in salmon
6.3 years ago by i.sudbery 22k
0
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1
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2.2k
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Comment: C: Can you choose minimum transcript coverage in salmon
6.3 years ago by i.sudbery 22k
3
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0
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2.2k
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Answer: A: Bioinformatics and biotechnology market in future.
6.3 years ago by i.sudbery 22k
1
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0
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2.2k
views
Answer: A: Difference between mapped reads and counts
6.3 years ago by i.sudbery 22k
1
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0
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2.9k
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Comment: C: Trascription factor binding sites prediction using FIMO
6.3 years ago by i.sudbery 22k
0
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0
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2.1k
views
Comment: C: Suggestions for avoiding False Positives while identifying differentially expres
6.3 years ago by i.sudbery 22k
0
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1
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2.1k
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Comment: C: Suggestions for avoiding False Positives while identifying differentially expres
6.3 years ago by i.sudbery 22k
0
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1
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3.0k
views
Comment: C: Chi Square test for negative binomial distribution using R.
6.3 years ago by i.sudbery 22k
0
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1
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3.0k
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Comment: C: Chi Square test for negative binomial distribution using R.
6.3 years ago by i.sudbery 22k
1
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0
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2.1k
views
Answer: A: Why does every database have a different set of exons for TP53 (and other genes)
6.3 years ago by i.sudbery 22k
0
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1
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3.0k
views
Comment: C: Metric to use for RNAseq expression matrix
6.3 years ago by i.sudbery 22k
0
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1
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3.0k
views
Comment: C: Metric to use for RNAseq expression matrix
6.3 years ago by i.sudbery 22k
1
vote
2
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2.9k
views
Answer: A: Finding # of UMIs with and without specific SNP
6.3 years ago by i.sudbery 22k
1
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1
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2.9k
views
Comment: C: Finding # of UMIs with and without specific SNP
6.3 years ago by i.sudbery 22k
0
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1
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3.0k
views
Comment: C: Metric to use for RNAseq expression matrix
6.3 years ago by i.sudbery 22k
2
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1
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3.0k
views
Comment: C: Metric to use for RNAseq expression matrix
6.3 years ago by i.sudbery 22k
3
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2
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3.0k
views
Answer: A: Metric to use for RNAseq expression matrix
6.3 years ago by i.sudbery 22k
1
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0
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4.6k
views
Comment: C: Umi tools dedup output
6.3 years ago by i.sudbery 22k
4
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0
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1.9k
views
Answer: C: race of people
6.3 years ago by i.sudbery 22k
0
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1
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4.6k
views
Comment: C: Umi tools dedup output
6.3 years ago by i.sudbery 22k
0
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1
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4.6k
views
Comment: C: Umi tools dedup output
6.3 years ago by i.sudbery 22k
2
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1
reply
8.3k
views
Comment: C: Error message running admixture in WSL (Ubuntu) : Segmentation fault (core dumpe
6.3 years ago by i.sudbery 22k
1
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0
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8.3k
views
Comment: C: Error message running admixture in WSL (Ubuntu) : Segmentation fault (core dumpe
6.3 years ago by i.sudbery 22k
1
vote
1
reply
4.6k
views
Comment: C: Umi tools dedup output
6.3 years ago by i.sudbery 22k
3
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1
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4.6k
views
Answer: A: Umi tools dedup output
6.3 years ago by i.sudbery 22k
0
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0
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1.5k
views
Answer: A: Question about deduplication with UMI-tools
6.3 years ago by i.sudbery 22k
1
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0
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6.6k
views
Answer: A: how to adjust for continuous covariates in limma?
6.4 years ago by i.sudbery 22k
0
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0
replies
3.8k
views
Comment: C: Seurat cluster is split and appears in 2 different areas on the tsne plot
6.4 years ago by i.sudbery 22k
0
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1
reply
1.5k
views
Answer: A: Gene symbols of different species
6.4 years ago by i.sudbery 22k
0
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1
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1.4k
views
Comment: C: IsoformSwitchAnalyzeR and cuffdiff data error
6.4 years ago by i.sudbery 22k
0
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0
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1.8k
views
Comment: C: Parent of Origin analysis in trio dataset
6.4 years ago by i.sudbery 22k
0
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0
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1.7k
views
Comment: C: How to do confidence bounds on False Discovery rate?
6.4 years ago by i.sudbery 22k
1
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0
replies
4.2k
views
Comment: C: Any strategy to find out the reason of having unusual Coefficient of Variation (
6.4 years ago by i.sudbery 22k
5
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2
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5.7k
views
Answer: A: Count mapped reads to genes reference
6.4 years ago by i.sudbery 22k
1
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0
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5.7k
views
Comment: C: Tabix on bed file can't parse
6.4 years ago by i.sudbery 22k
0
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1
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4.1k
views
Comment: C: DESeq2 differential expression analysis for time course experiment: course of si
6.4 years ago by i.sudbery 22k
0
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0
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4.1k
views
Comment: C: DESeq2 differential expression analysis for time course experiment: course of si
6.4 years ago by i.sudbery 22k
2
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1
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4.1k
views
Comment: C: DESeq2 differential expression analysis for time course experiment: course of si
6.4 years ago by i.sudbery 22k
10
votes
7
replies
5.2k
views
How to tell if a BigWig file is 1-based or 0-based?
bigwig coordinate systems
updated 6.4 years ago by 36k • written 6.4 years ago by 22k
1
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0
replies
3.7k
views
Comment: C: Convert fasta headers to GFF
6.4 years ago by i.sudbery 22k
0
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0
replies
7.2k
views
Comment: C: NGS Data storage solutions for small organisations or big labs
6.4 years ago by i.sudbery 22k
1
vote
1
reply
2.7k
views
Comment: C: No aligned reads after featurecounts. BAM files have >85% reads mapped
6.4 years ago by i.sudbery 22k
3
votes
0
replies
1000
views
Answer: A: Pathway Enrichment on lncRNAs
6.4 years ago by i.sudbery 22k
1,728 results • Page 26 of 35
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