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1
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0
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1.4k
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Comment:
Comment: New versions of the same transcripts ID may have different exons coordinates??
17 months ago by
i.sudbery
22k
1
vote
0
replies
2.0k
views
Answer:
Answer: Extracting UMIs from NEXTFLEX Small RNA-Seq reads using UMI_tools
17 months ago by
i.sudbery
22k
1
vote
0
replies
1.4k
views
Comment:
Comment: New versions of the same transcripts ID may have different exons coordinates??
17 months ago by
i.sudbery
22k
0
votes
1
reply
1.8k
views
Comment:
Comment: Looking for clarification of .vcf output from variant calling
17 months ago by
i.sudbery
22k
0
votes
0
replies
2.8k
views
Comment:
Comment: Deseq2 , Limma - the paired test seems to be incorrect - is it known problem ?
17 months ago by
i.sudbery
22k
0
votes
1
reply
2.8k
views
Comment:
Comment: Deseq2 , Limma - the paired test seems to be incorrect - is it known problem ?
17 months ago by
i.sudbery
22k
0
votes
1
reply
2.8k
views
Answer:
Answer: Deseq2 , Limma - the paired test seems to be incorrect - is it known problem ?
17 months ago by
i.sudbery
22k
1
vote
0
replies
2.8k
views
Comment:
Comment: Deseq2 , Limma - the paired test seems to be incorrect - is it known problem ?
updated 17 months ago by
Ram
45k • written 17 months ago by
i.sudbery
22k
0
votes
1
reply
883
views
Comment:
Comment: Bias in FDR distribution
17 months ago by
i.sudbery
22k
2
votes
1
reply
1.1k
views
Answer:
Answer: Does it make sense to use scRNAseq for this experiment?
17 months ago by
i.sudbery
22k
2
votes
1
reply
1.9k
views
Answer:
Answer: How do you make an original contribution to knowledge in applied bioinformatics?
17 months ago by
i.sudbery
22k
1
vote
0
replies
2.1k
views
Comment:
Comment: PCA plot no distinct cluster. Only p < 0.05 indicates significant DEGs, while ad
17 months ago by
i.sudbery
22k
2
votes
0
replies
984
views
Comment:
Comment: Combining microarray, RNA Seq, whole & exome sequencing
17 months ago by
i.sudbery
22k
0
votes
0
replies
1.0k
views
Comment:
Comment: How to Split FASTQ File by UMI Indices into Multiple Files
17 months ago by
i.sudbery
22k
1
vote
0
replies
3.2k
views
Comment:
Comment: UMI-Tools knee-method has great influence on the results of white list
17 months ago by
i.sudbery
22k
1
vote
2
replies
22k
views
Comment:
Comment: log2 fold change in RNA-seq analysis
18 months ago by
i.sudbery
22k
0
votes
0
replies
6.0k
views
Comment:
Comment: Ideal PC configurations and operating system for bioinformatics laboratory
18 months ago by
i.sudbery
22k
0
votes
1
reply
6.0k
views
Comment:
Comment: Ideal PC configurations and operating system for bioinformatics laboratory
18 months ago by
i.sudbery
22k
1
vote
1
reply
1.4k
views
Answer:
Answer: How do we do quantification using stringtie merge option for all the merged samp
18 months ago by
i.sudbery
22k
1
vote
0
replies
916
views
Answer:
Answer: How to interpret this plotMDS of three disease clusters?
18 months ago by
i.sudbery
22k
0
votes
0
replies
6.0k
views
Comment:
Comment: Ideal PC configurations and operating system for bioinformatics laboratory
18 months ago by
i.sudbery
22k
0
votes
1
reply
1.1k
views
Comment:
Comment: Problem with Calling Variants from RNA-Seq data
18 months ago by
i.sudbery
22k
0
votes
0
replies
989
views
Answer:
Answer: Biomart issue, why so few 3'utrs?
18 months ago by
i.sudbery
22k
0
votes
1
reply
989
views
Comment:
Comment: Biomart issue, why so few 3'utrs?
18 months ago by
i.sudbery
22k
3
votes
2
replies
3.2k
views
Answer:
Answer: UMI-Tools knee-method has great influence on the results of white list
18 months ago by
i.sudbery
22k
0
votes
1
reply
3.2k
views
Comment:
Comment: UMI-Tools knee-method has great influence on the results of white list
18 months ago by
i.sudbery
22k
0
votes
0
replies
1.6k
views
Comment:
Comment: featureCounts output summary assigned value higher than uniquely mapped reads fr
18 months ago by
i.sudbery
22k
0
votes
1
reply
3.2k
views
Comment:
Comment: UMI-Tools knee-method has great influence on the results of white list
18 months ago by
i.sudbery
22k
1
vote
1
reply
3.2k
views
Comment:
Comment: UMI-Tools knee-method has great influence on the results of white list
18 months ago by
i.sudbery
22k
0
votes
1
reply
3.2k
views
Comment:
Comment: UMI-Tools knee-method has great influence on the results of white list
18 months ago by
i.sudbery
22k
1
vote
1
reply
2.8k
views
Answer:
Answer: Understanding STAR output (Aligned.out.sam file)
18 months ago by
i.sudbery
22k
1
vote
1
reply
1.6k
views
Comment:
Comment: How does gene length effect the number of reads mapped
18 months ago by
i.sudbery
22k
1
vote
2
replies
1.6k
views
Comment:
Comment: How does gene length effect the number of reads mapped
18 months ago by
i.sudbery
22k
0
votes
1
reply
1.6k
views
Answer:
Answer: How goes gene length effect the number of reads mapped
18 months ago by
i.sudbery
22k
1
vote
0
replies
6.1k
views
Answer:
Answer: What purposes can TPM values be used for?
18 months ago by
i.sudbery
22k
0
votes
0
replies
573
views
Comment:
Comment: Alternatives to metanalyisis. P integration. Horiztonal integration RNA-seq
18 months ago by
i.sudbery
22k
1
vote
0
replies
6.5k
views
Comment:
Comment: NGS forensics: how to know if data is fabricated
18 months ago by
i.sudbery
22k
0
votes
0
replies
3.0k
views
Comment:
Comment: Low mapping rate with Salmon
18 months ago by
i.sudbery
22k
0
votes
1
reply
6.5k
views
Comment:
Comment: NGS forensics: how to know if data is fabricated
18 months ago by
i.sudbery
22k
0
votes
0
replies
1.3k
views
Comment:
Comment: ChIP-seq datasets: input samples omitted?
18 months ago by
i.sudbery
22k
1
vote
1
reply
779
views
Answer:
Answer: How to solve DESeq2 Error in checkFullRank(modelMatrix)?
18 months ago by
i.sudbery
22k
1
vote
1
reply
6.5k
views
Comment:
Comment: NGS forensics: how to know if data is fabricated
18 months ago by
i.sudbery
22k
1
vote
0
replies
6.5k
views
Comment:
Comment: NGS forensics: how to know if data is fabricated
18 months ago by
i.sudbery
22k
0
votes
1
reply
3.0k
views
Comment:
Comment: Low mapping rate with Salmon
19 months ago by
i.sudbery
22k
1
vote
0
replies
1.6k
views
Comment:
Comment: what is the purpose of indexing the reference genome (Kallisto)
19 months ago by
i.sudbery
22k
0
votes
0
replies
6.0k
views
Comment:
Comment: Ideal PC configurations and operating system for bioinformatics laboratory
19 months ago by
i.sudbery
22k
0
votes
1
reply
3.0k
views
Comment:
Comment: Low mapping rate with Salmon
19 months ago by
i.sudbery
22k
1
vote
0
replies
1.8k
views
Comment:
Comment: Marking duplicates using UMIs
19 months ago by
i.sudbery
22k
1
vote
1
reply
1.8k
views
Comment:
Comment: Marking duplicates using UMIs
19 months ago by
i.sudbery
22k
3
votes
0
replies
991
views
Answer:
Answer: Trouble understanding seemingly contradicting results of GSE analysis (contradic
19 months ago by
i.sudbery
22k
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