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1
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1
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3.6k
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Answer: A: RNA-seq triple replicates
updated 5.9 years ago by 45k • written 10.2 years ago by ★ 1.3k
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2
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12k
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Comment: C: how to remove adapter sequence in RNAseq fastq file from a paper.
updated 5.9 years ago by 45k • written 10.3 years ago by ★ 1.3k
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0
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18k
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Comment: C: SAMtools mpileup and bcftools doesn't call InDels...
8.5 years ago by Evgeniia Golovina ★ 1.3k
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0
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36k
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Comment: C: How bcftools isec works ?
9.0 years ago by Evgeniia Golovina ★ 1.3k
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0
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20k
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Comment: C: SNP call using bcftools
9.2 years ago by Evgeniia Golovina ★ 1.3k
1
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0
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15k
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Comment: C: What is the difference between --split-files and --split-3 when using fastq-dump
9.4 years ago by Evgeniia Golovina ★ 1.3k
1
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0
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15k
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Comment: C: What is the difference between --split-files and --split-3 when using fastq-dump
9.4 years ago by Evgeniia Golovina ★ 1.3k
3
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0
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15k
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Comment: C: What is the difference between --split-files and --split-3 when using fastq-dump
9.4 years ago by Evgeniia Golovina ★ 1.3k
2
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1
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15k
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Comment: C: What is the difference between --split-files and --split-3 when using fastq-dump
9.4 years ago by Evgeniia Golovina ★ 1.3k
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0
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5.0k
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Comment: C: Where can I get exome vcf file from the 1000 genome project?
9.5 years ago by Evgeniia Golovina ★ 1.3k
1
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1
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5.0k
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Answer: A: Where can I get exome vcf file from the 1000 genome project?
9.5 years ago by Evgeniia Golovina ★ 1.3k
0
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0
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2.8k
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Answer: A: Bowtie2 sequence alignment of Baking yeast
9.5 years ago by Evgeniia Golovina ★ 1.3k
3
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0
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9.4k
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Comment: Comment: SRA to BAM
updated 3.2 years ago by 45k • written 9.5 years ago by ★ 1.3k
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0
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7.1k
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Comment: C: Indexing 34Gbp Reference Genomes With Bwa -A Bwtsw
9.6 years ago by Evgeniia Golovina ★ 1.3k
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0
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5.0k
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Comment: Comment: How to merge annotation file(gtf) from different souce
updated 2.9 years ago by 45k • written 10.1 years ago by ★ 1.3k
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30k
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Comment: C: Bcftools view options for SNPs calling.
10.2 years ago by Evgeniia Golovina ★ 1.3k
2
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2
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30k
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Comment: Comment: Bcftools view options for SNPs calling.
updated 2.8 years ago by 45k • written 10.2 years ago by ★ 1.3k
3
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0
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5.7k
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Answer: Answer: Filter/Annotate VCF with dbSNP during variant calling workflow
updated 2.8 years ago by 45k • written 10.2 years ago by ★ 1.3k
4
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1
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5.1k
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Answer: Answer: Cant find database of Transcription factors' binding site
updated 2.8 years ago by 45k • written 10.2 years ago by ★ 1.3k
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0
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3.6k
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Comment: C: RNA-seq triple replicates
10.2 years ago by Evgeniia Golovina ★ 1.3k
15
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1
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21k
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Answer: Answer: Ti Tv ratio and their usefulness in exome sequencing
updated 2.8 years ago by 45k • written 10.2 years ago by ★ 1.3k
12
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1
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18k
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Answer: Answer: SAMtools mpileup and bcftools doesn't call InDels...
updated 4.2 years ago by 45k • written 10.2 years ago by ★ 1.3k
0
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0
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4.0k
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Comment: Comment: how to use bcftools isec to union two vcf files?
updated 3.5 years ago by 45k • written 10.3 years ago by ★ 1.3k
2
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1
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16k
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Answer: A: Where can I download the NCBI reference genome for mouse GRCm38
10.3 years ago by Evgeniia Golovina ★ 1.3k
0
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0
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29k
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Answer: Answer: DESeq2 analysis for multiple conditions
updated 2.7 years ago by 45k • written 10.3 years ago by ★ 1.3k
2
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0
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4.4k
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Answer: A: Differential Methylation Analysis
10.3 years ago by Evgeniia Golovina ★ 1.3k
2
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1
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2.3k
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Answer: Answer: Public RNA-seq dataset for human & 2x250bp or longer
updated 2.7 years ago by 45k • written 10.3 years ago by ★ 1.3k
2
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0
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3.3k
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Answer: A: Gene Expression Data of Disease vs. Control
10.3 years ago by Evgeniia Golovina ★ 1.3k
1
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0
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3.9k
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Answer: Answer: "web browser" compatible genome browsers
updated 2.7 years ago by 45k • written 10.3 years ago by ★ 1.3k
0
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0
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4.5k
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Comment: Comment: What is the difference between different SRA reads from different lanes for one
updated 2.7 years ago by 45k • written 10.3 years ago by ★ 1.3k
0
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1
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4.5k
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Comment: Comment: What is the difference between different SRA reads from different lanes for one
updated 2.7 years ago by 45k • written 10.3 years ago by ★ 1.3k
2
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1
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4.5k
views
Answer: Answer: What is the difference between different SRA reads from different lanes for one
updated 2.7 years ago by 45k • written 10.3 years ago by ★ 1.3k
1
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0
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3.7k
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Answer: Answer: Non coding RNA expression data
updated 2.7 years ago by 45k • written 10.4 years ago by ★ 1.3k
1
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0
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3.7k
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Answer: Answer: using cufflinks when investigating differential expression
updated 2.6 years ago by 45k • written 10.4 years ago by ★ 1.3k
10
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3
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20k
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Answer: Answer: SNP call using bcftools
updated 4.2 years ago by 45k • written 10.4 years ago by ★ 1.3k
0
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0
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20k
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Comment: C: SNP call using bcftools
10.4 years ago by Evgeniia Golovina ★ 1.3k
0
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1
reply
20k
views
Comment: Comment: SNP call using bcftools
updated 3.2 years ago by 45k • written 10.4 years ago by ★ 1.3k
0
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1
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20k
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Comment: C: SNP call using bcftools
10.4 years ago by Evgeniia Golovina ★ 1.3k
0
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2
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4.9k
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Answer: Answer: Tophat: # reads mapping to CDS, rRNA, intergenic?
updated 3.2 years ago by 45k • written 10.4 years ago by ★ 1.3k
0
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1
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3.4k
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Answer: Answer: Tool to detect Copy Number Variations(CNV) using Single Read End Data
updated 3.2 years ago by 45k • written 10.4 years ago by ★ 1.3k
4
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1
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9.4k
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Answer: Answer: SRA to BAM
updated 3.2 years ago by 45k • written 10.4 years ago by ★ 1.3k
1
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1
reply
9.4k
views
Answer: Answer: SRA to BAM
updated 3.2 years ago by 45k • written 10.4 years ago by ★ 1.3k
28
votes
1
reply
36k
views
Answer: Answer: How bcftools isec works ?
updated 3.2 years ago by 45k • written 10.5 years ago by ★ 1.3k
0
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0
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8.2k
views
Comment: C: What's the difference between mpileup output and bcftools call ?
10.5 years ago by Evgeniia Golovina ★ 1.3k
16
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1
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8.2k
views
Answer: Answer: What's the difference between mpileup output and bcftools call ?
updated 3.2 years ago by 45k • written 10.5 years ago by ★ 1.3k
0
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0
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5.6k
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Answer: Answer: WGBS data analysis in Galaxy?
updated 3.2 years ago by 45k • written 10.5 years ago by ★ 1.3k
2
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1
reply
2.6k
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Comment: Comment: r3Cseq rat genome
updated 3.3 years ago by 45k • written 10.5 years ago by ★ 1.3k
2
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1
reply
2.6k
views
Answer: Answer: r3Cseq rat genome
updated 3.3 years ago by 45k • written 10.5 years ago by ★ 1.3k
1
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0
replies
1.7k
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Answer: Answer: differential splicing for subset of genes
updated 3.3 years ago by 45k • written 10.5 years ago by ★ 1.3k
0
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1
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2.6k
views
Answer: A: Is it possible to map the Miseq data to the reference?
10.5 years ago by Evgeniia Golovina ★ 1.3k
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