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Comment: Comment: Gene Expression Timeline Analysis for N=1
5 weeks ago by ATRX ★ 1.2k
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671
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Comment: Comment: Best way of visualzing RNA-seq bam files
5 months ago by ATRX ★ 1.2k
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0
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671
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Comment: Comment: Best way of visualzing RNA-seq bam files
5 months ago by ATRX ★ 1.2k
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1
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1.1k
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Comment: Comment: Create a fasta and gtf file
5 months ago by ATRX ★ 1.2k
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1.1k
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Comment: Comment: Create a fasta and gtf file
5 months ago by ATRX ★ 1.2k
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1
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1.1k
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Comment: Comment: Create a fasta and gtf file
5 months ago by ATRX ★ 1.2k
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0
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2.0k
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Comment: Comment: dedup STAR transcriptome file using umi_tools
5 months ago by ATRX ★ 1.2k
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1
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2.0k
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Comment: Comment: dedup STAR transcriptome file using umi_tools
5 months ago by ATRX ★ 1.2k
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2.0k
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Comment: Comment: dedup STAR transcriptome file using umi_tools
5 months ago by ATRX ★ 1.2k
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1
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2.0k
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Comment: Comment: dedup STAR transcriptome file using umi_tools
5 months ago by ATRX ★ 1.2k
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1
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2.0k
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Comment: Comment: dedup STAR transcriptome file using umi_tools
5 months ago by ATRX ★ 1.2k
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1
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2.0k
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Comment: Comment: dedup STAR transcriptome file using umi_tools
5 months ago by ATRX ★ 1.2k
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1
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1.0k
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Comment: Comment: rRNA in gencode gtf file and rRNA rate in the RNA-seq dataset
7 months ago by ATRX ★ 1.2k
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1
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1.0k
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Comment: Comment: rRNA in gencode gtf file and rRNA rate in the RNA-seq dataset
7 months ago by ATRX ★ 1.2k
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580
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Comment: Comment: Infer UMI from fastq files
9 months ago by ATRX ★ 1.2k
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2.1k
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Comment: C: Extract the overlapping paired-end reads
4.3 years ago by ATRX ★ 1.2k
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1
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2.1k
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Comment: C: Extract the overlapping paired-end reads
4.3 years ago by ATRX ★ 1.2k
1
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1
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4.7k
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Comment: C: Questions related to ChromHMM+using MACS2 peak calling output bed file as input
5.9 years ago by ATRX ★ 1.2k
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0
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5.2k
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Comment: C: ComBat (SVA) Application - Two Technical Effects
8.6 years ago by ATRX ★ 1.2k
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1
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5.2k
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Comment: C: ComBat (SVA) Application - Two Technical Effects
8.6 years ago by ATRX ★ 1.2k
1
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0
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14k
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Comment: C: Difference between the Fasta files from UCSC and Gencode/Ensembl
8.6 years ago by ATRX ★ 1.2k
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0
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14k
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Comment: C: Difference between the Fasta files from UCSC and Gencode/Ensembl
8.6 years ago by ATRX ★ 1.2k
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0
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71k
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Comment: C: Recommended cutoff for FDR - 0.05 or 0.1
8.6 years ago by ATRX ★ 1.2k
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2
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71k
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Comment: C: Recommended cutoff for FDR - 0.05 or 0.1
8.7 years ago by ATRX ★ 1.2k
3
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1
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71k
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Comment: C: Recommended cutoff for FDR - 0.05 or 0.1
8.7 years ago by ATRX ★ 1.2k
1
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1
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4.1k
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Comment: C: List of genes expressed in Brain and different tissues
8.7 years ago by ATRX ★ 1.2k
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0
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4.1k
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Comment: C: List of genes expressed in Brain and different tissues
8.7 years ago by ATRX ★ 1.2k
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0
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2.7k
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Comment: C: Does differential binding analysis across different ChIP-Seq samples makes sense
8.7 years ago by ATRX ★ 1.2k
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0
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1.9k
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Comment: C: ENCODE 2016: Research Applications and Users Meeting
8.8 years ago by ATRX ★ 1.2k
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1
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4.7k
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Comment: C: what is the meaning of covariates in ComBat
8.8 years ago by ATRX ★ 1.2k
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0
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31k
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Comment: C: removing batch effects using ComBat and SVA
8.9 years ago by ATRX ★ 1.2k
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1
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31k
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Comment: C: removing batch effects using ComBat and SVA
8.9 years ago by ATRX ★ 1.2k
0
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0
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3.1k
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Comment: C: Transcription factor binding site prediction program/algorithm
8.9 years ago by ATRX ★ 1.2k
2
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1
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31k
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Comment: C: removing batch effects using ComBat and SVA
8.9 years ago by ATRX ★ 1.2k
0
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0
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4.7k
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Comment: C: reading CELfiles for Human Exon 1.0 ST Array [CDF: HuEx-1_0-st-v2,coreR3,A200711
8.9 years ago by ATRX ★ 1.2k
0
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1
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4.7k
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Comment: C: reading CELfiles for Human Exon 1.0 ST Array [CDF: HuEx-1_0-st-v2,coreR3,A200711
8.9 years ago by ATRX ★ 1.2k
1
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1
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6.0k
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Comment: C: What is the correct way of using GTEx, CCLE and HPA data?
8.9 years ago by ATRX ★ 1.2k
0
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1
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6.5k
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Comment: C: Length of transcripts of mm9
8.9 years ago by ATRX ★ 1.2k
1
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1
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6.0k
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Comment: C: What is the correct way of using GTEx, CCLE and HPA data?
8.9 years ago by ATRX ★ 1.2k
0
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1
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4.7k
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Comment: C: reading CELfiles for Human Exon 1.0 ST Array [CDF: HuEx-1_0-st-v2,coreR3,A200711
8.9 years ago by ATRX ★ 1.2k
0
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1
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31k
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Comment: C: removing batch effects using ComBat and SVA
8.9 years ago by ATRX ★ 1.2k
0
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0
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3.9k
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Comment: C: Error in R Script
8.9 years ago by ATRX ★ 1.2k
0
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0
replies
1.8k
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Comment: C: Comparative analysis of two microarray datasets
8.9 years ago by ATRX ★ 1.2k
1
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1
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3.9k
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Comment: C: Error in R Script
8.9 years ago by ATRX ★ 1.2k
2
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2
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3.9k
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Comment: C: Error in R Script
8.9 years ago by ATRX ★ 1.2k
1
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0
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1.8k
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Comment: C: RNA-Seq Expression Project for Oncology
8.9 years ago by ATRX ★ 1.2k
1
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1
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16k
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Comment: C: How to get counts of STAR output (sam/bam).
8.9 years ago by ATRX ★ 1.2k
1
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1
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1.8k
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Comment: C: RNA-Seq Expression Project for Oncology
8.9 years ago by ATRX ★ 1.2k
1
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1
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3.0k
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Comment: C: Download human ChIP-seq peaks other than ENCODE
8.9 years ago by ATRX ★ 1.2k
0
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0
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3.2k
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Comment: C: NIH roadmap epigenomics data Bam files
8.9 years ago by ATRX ★ 1.2k
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