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9
votes
1
reply
29k
views
Answer:
A: removing batch effects using ComBat and SVA
8.2 years ago by
Ar
★ 1.1k
0
votes
1
reply
2.3k
views
Answer:
A: Identify genes near occurrences of a TF binding sequence
8.2 years ago by
Ar
★ 1.1k
0
votes
1
reply
2.3k
views
Answer:
A: Identify genes near occurrences of a TF binding sequence
8.2 years ago by
Ar
★ 1.1k
0
votes
0
replies
3.7k
views
Answer:
A: compare gene count profiles between samples
8.2 years ago by
Ar
★ 1.1k
0
votes
0
replies
3.5k
views
Comment:
C: Error in R Script
8.2 years ago by
Ar
★ 1.1k
2
votes
1
reply
1.9k
views
Answer:
A: problem in microarray data analysis
8.2 years ago by
Ar
★ 1.1k
0
votes
0
replies
1.7k
views
Comment:
C: Comparative analysis of two microarray datasets
8.2 years ago by
Ar
★ 1.1k
1
vote
1
reply
3.5k
views
Comment:
C: Error in R Script
8.2 years ago by
Ar
★ 1.1k
5
votes
2
replies
1.8k
views
Tutorial:
ENCODE 2016: Research Applications and Users Meeting
ChIP-Seq
next-gen
ENCODE
updated 17 months ago by
Ram
44k • written 8.3 years ago by
Ar
★ 1.1k
3
votes
1
reply
5.6k
views
Answer:
A: What is the correct way of using GTEx, CCLE and HPA data?
8.2 years ago by
Ar
★ 1.1k
11
votes
1
reply
6.2k
views
Answer:
A: Beginner in Bioinformatics / computational biology field
8.2 years ago by
Ar
★ 1.1k
10
votes
1
reply
6.0k
views
Answer:
A: ERROR in loading data through rma
8.2 years ago by
Ar
★ 1.1k
2
votes
2
replies
3.5k
views
Comment:
C: Error in R Script
8.2 years ago by
Ar
★ 1.1k
2
votes
0
replies
2.6k
views
Answer:
A: How can i change the position of the legend in a MAplot?
8.3 years ago by
Ar
★ 1.1k
2
votes
1
reply
4.4k
views
Answer:
A: CCLE drug response data
8.3 years ago by
Ar
★ 1.1k
3
votes
1
reply
3.5k
views
Answer:
A: Error in R Script
8.3 years ago by
Ar
★ 1.1k
1
vote
0
replies
1.6k
views
Comment:
C: RNA-Seq Expression Project for Oncology
8.3 years ago by
Ar
★ 1.1k
1
vote
1
reply
15k
views
Comment:
C: How to get counts of STAR output (sam/bam).
8.3 years ago by
Ar
★ 1.1k
1
vote
1
reply
1.6k
views
Comment:
C: RNA-Seq Expression Project for Oncology
8.3 years ago by
Ar
★ 1.1k
2
votes
0
replies
3.8k
views
Answer:
A: normalizing CEL files from Affymetrix Human Genome U133 Plus 2.0 Array and Affym
8.3 years ago by
Ar
★ 1.1k
1
vote
0
replies
2.5k
views
Answer:
A: Is it possible to get FASTA from .CEL or .DAT files?
8.3 years ago by
Ar
★ 1.1k
0
votes
0
replies
1.5k
views
Answer:
A: How to interpret Roadmap epigenome reprocessed data
8.3 years ago by
Ar
★ 1.1k
1
vote
0
replies
6.7k
views
Answer:
A: What minimum read length to retain in a standard rna-seq dataset?
8.3 years ago by
Ar
★ 1.1k
0
votes
0
replies
1.4k
views
Answer:
A: Retrieving Cell names of an experiment using NCBI - Eutil API
8.3 years ago by
Ar
★ 1.1k
1
vote
0
replies
1.5k
views
Answer:
A: Microarray data processing from multiple runs
8.3 years ago by
Ar
★ 1.1k
1
vote
1
reply
2.8k
views
Comment:
C: Download human ChIP-seq peaks other than ENCODE
8.3 years ago by
Ar
★ 1.1k
0
votes
0
replies
2.9k
views
Comment:
C: NIH roadmap epigenomics data Bam files
8.3 years ago by
Ar
★ 1.1k
0
votes
0
replies
2.8k
views
Answer:
A: Download human ChIP-seq peaks other than ENCODE
8.3 years ago by
Ar
★ 1.1k
1
vote
1
reply
3.0k
views
Answer:
A: Batch effect in Axiom Human Origins Array
8.3 years ago by
Ar
★ 1.1k
0
votes
1
reply
5.2k
views
Comment:
C: Limma strange low p-values.
8.3 years ago by
Ar
★ 1.1k
7
votes
0
replies
5.2k
views
Answer:
A: Limma strange low p-values.
8.3 years ago by
Ar
★ 1.1k
0
votes
0
replies
5.2k
views
Comment:
C: Limma strange low p-values.
8.3 years ago by
Ar
★ 1.1k
0
votes
0
replies
2.9k
views
Comment:
C: Public paired end chip seq dataset, both ChIP and input?
8.3 years ago by
Ar
★ 1.1k
0
votes
1
reply
2.9k
views
Comment:
C: Public paired end chip seq dataset, both ChIP and input?
8.3 years ago by
Ar
★ 1.1k
3
votes
1
reply
2.9k
views
Answer:
A: Public paired end chip seq dataset, both ChIP and input?
8.3 years ago by
Ar
★ 1.1k
0
votes
0
replies
4.8k
views
Comment:
C: fasta and bowtie index file download
8.3 years ago by
Ar
★ 1.1k
0
votes
1
reply
4.8k
views
Answer:
A: fasta and bowtie index file download
8.3 years ago by
Ar
★ 1.1k
0
votes
0
replies
1.7k
views
Answer:
A: How to download all the possible RNA-seq data sets from public data bases?
8.3 years ago by
Ar
★ 1.1k
1
vote
0
replies
2.8k
views
Answer:
A: FastQC after read sequences, nothing happened...
8.3 years ago by
Ar
★ 1.1k
0
votes
1
reply
13k
views
Comment:
Comment: DESeq2 normalisation: is the size of the gene taken into account?
updated 21 months ago by
Ram
44k • written 9.2 years ago by
Ar
★ 1.1k
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