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Comment:
Comment: flagstats results show 0.0 % properly paired reads
updated 17 months ago by
Ram
43k • written 8.8 years ago by
SOHAIL
▴ 400
0
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1
reply
2.1k
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Comment:
C: Plotting F3 statistics values on world map
5.4 years ago by
SOHAIL
▴ 400
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2.1k
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Comment:
C: Plotting F3 statistics values on world map
5.4 years ago by
SOHAIL
▴ 400
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1
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4.2k
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Comment:
C: reference genome hs37d5 with PhiX
5.4 years ago by
SOHAIL
▴ 400
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1
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4.2k
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Comment:
C: reference genome hs37d5 with PhiX
5.6 years ago by
SOHAIL
▴ 400
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1
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4.2k
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Comment:
C: reference genome hs37d5 with PhiX
5.6 years ago by
SOHAIL
▴ 400
1
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4.2k
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Comment:
C: reference genome hs37d5 with PhiX
5.6 years ago by
SOHAIL
▴ 400
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3.1k
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Comment:
C: Remove ambiguous calls in the VCF file
5.6 years ago by
SOHAIL
▴ 400
0
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1
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3.1k
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Comment:
C: Remove ambiguous calls in the VCF file
updated 5.6 years ago by
finswimmer
16k • written 5.6 years ago by
SOHAIL
▴ 400
0
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1
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4.8k
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Comment:
C: Genotyping with samtools/bcftools
5.8 years ago by
SOHAIL
▴ 400
1
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9.8k
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Comment:
C: calculate Per variant Heterozygosity from VCF file
6.3 years ago by
SOHAIL
▴ 400
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5.9k
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Comment:
C: Switch the position of REF/ALT alleles based on AA (ancestral allele) annotation
6.7 years ago by
SOHAIL
▴ 400
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1
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5.9k
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Comment:
C: Switch the position of REF/ALT alleles based on AA (ancestral allele) annotation
6.7 years ago by
SOHAIL
▴ 400
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5.9k
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Comment:
C: Switch the position of REF/ALT alleles based on AA (ancestral allele) annotation
6.7 years ago by
SOHAIL
▴ 400
0
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0
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12k
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Comment:
C: Generate Consensus sequence from BAM file
7.2 years ago by
SOHAIL
▴ 400
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12k
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Comment:
C: Generate Consensus sequence from BAM file
7.2 years ago by
SOHAIL
▴ 400
2
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1
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1.9k
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Comment:
C: comparing coordinates between two files
7.3 years ago by
SOHAIL
▴ 400
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5.4k
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Comment:
C: P-Value calculation from iHS and XP-EHH scores
7.3 years ago by
SOHAIL
▴ 400
1
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Comment:
C: How to find variants that are common in one population but rare in others (popul
7.3 years ago by
SOHAIL
▴ 400
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3.4k
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Comment:
C: How to find variants that are common in one population but rare in others (popul
7.3 years ago by
SOHAIL
▴ 400
1
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13k
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Comment:
C: How To Perform A Fst (Fixation Index) Calculation Over A Vcf File Using A Slidin
7.3 years ago by
SOHAIL
▴ 400
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11k
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Comment:
C: Principal Component Analysis using SNP data ste
7.5 years ago by
SOHAIL
▴ 400
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2.4k
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Comment:
C: How to combine variants??
7.5 years ago by
SOHAIL
▴ 400
1
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3.6k
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Comment:
C: Determine the percentage of the human genome covered by the BED interval file
7.5 years ago by
SOHAIL
▴ 400
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3.6k
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Comment:
C: Determine the percentage of the human genome covered by the BED interval file
7.5 years ago by
SOHAIL
▴ 400
0
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1
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3.5k
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Comment:
C: Filtering no-calls from VCF file
7.6 years ago by
SOHAIL
▴ 400
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1
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12k
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Comment:
C: Haplotype Phasing with Shapeit2
7.7 years ago by
SOHAIL
▴ 400
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1
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3.2k
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Comment:
A: Optimizing Java Jar's parameters while processing large high throughput sequenci
7.8 years ago by
SOHAIL
▴ 400
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1
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3.1k
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Comment:
A: split reads for different lanes in BAM files
7.8 years ago by
SOHAIL
▴ 400
0
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1
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4.1k
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Comment:
C: Parallelizing SAMTOOLS: how to make my command run faster?
7.8 years ago by
SOHAIL
▴ 400
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3.7k
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Comment:
C: Processing FASTQ files after fastq-dump
7.9 years ago by
SOHAIL
▴ 400
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1
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3.4k
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Comment:
C: Edit strings in FASTQ file
7.9 years ago by
SOHAIL
▴ 400
0
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0
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10k
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Comment:
C: BWA-MEM Vs BWA-ALN
8.0 years ago by
SOHAIL
▴ 400
0
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0
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17k
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Comment:
Comment: VCF to BCF file conversion
updated 18 months ago by
Ram
43k • written 8.7 years ago by
SOHAIL
▴ 400
0
votes
0
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17k
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Comment:
Comment: VCF to BCF file conversion
updated 18 months ago by
Ram
43k • written 8.7 years ago by
SOHAIL
▴ 400
0
votes
1
reply
5.5k
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Comment:
Comment: flagstats results show 0.0 % properly paired reads
updated 17 months ago by
Ram
43k • written 8.8 years ago by
SOHAIL
▴ 400
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