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Comment: Comment: MACS2: What is in 4th column of treat_pvalue.bdg/treat_qvalue.bdg files?
2.7 years ago by salamandra ▴ 550
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2.6k
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Comment: C: Affymetrix: probeset or transcript cluster?
3.9 years ago by salamandra ▴ 550
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2.6k
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Comment: C: Affymetrix: probeset or transcript cluster?
3.9 years ago by salamandra ▴ 550
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1
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2.6k
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Comment: C: Affymetrix: probeset or transcript cluster?
3.9 years ago by salamandra ▴ 550
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1
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2.6k
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Comment: C: Affymetrix: probeset or transcript cluster?
3.9 years ago by salamandra ▴ 550
2
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13k
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Comment: C: Does Gene length corrected TMM [GeTMM] violate any assumptions of TMM normalizat
4.2 years ago by salamandra ▴ 550
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6.7k
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Comment: C: Human Exon array probeset to gene-level expression
4.7 years ago by salamandra ▴ 550
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6.7k
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Comment: C: Human Exon array probeset to gene-level expression
4.7 years ago by salamandra ▴ 550
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1
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6.7k
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Comment: C: Human Exon array probeset to gene-level expression
4.7 years ago by salamandra ▴ 550
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0
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6.7k
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Comment: C: Human Exon array probeset to gene-level expression
4.7 years ago by salamandra ▴ 550
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1
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6.7k
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Comment: C: Human Exon array probeset to gene-level expression
4.7 years ago by salamandra ▴ 550
0
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1
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6.7k
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Comment: C: Human Exon array probeset to gene-level expression
4.7 years ago by salamandra ▴ 550
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1
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6.7k
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Comment: C: Human Exon array probeset to gene-level expression
4.7 years ago by salamandra ▴ 550
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1
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7.9k
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Comment: C: Cannot read Illumina data (.bgx and .txt format) in R for microanalysis
4.8 years ago by salamandra ▴ 550
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2.0k
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Comment: C: Error when reading microarray idat files from illumina
4.8 years ago by salamandra ▴ 550
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1
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3.3k
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Comment: C: Biopython installation/set path fails in conda env
4.9 years ago by salamandra ▴ 550
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1
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3.3k
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Comment: C: Biopython installation/set path fails in conda env
4.9 years ago by salamandra ▴ 550
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6.5k
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Comment: C: BiomaRt: archive version of ensembl not working
5.6 years ago by salamandra ▴ 550
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1
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9.3k
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Comment: C: If we use MACS2 do we need to remove duplicate sequences with samtools rmdup ?
5.6 years ago by salamandra ▴ 550
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1
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9.3k
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Comment: C: If we use MACS2 do we need to remove duplicate sequences with samtools rmdup ?
5.6 years ago by salamandra ▴ 550
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1
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9.3k
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Comment: C: If we use MACS2 do we need to remove duplicate sequences with samtools rmdup ?
5.6 years ago by salamandra ▴ 550
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1
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8.3k
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Comment: C: DESeq2 design formula: how to use the opposite interaction term?
5.6 years ago by salamandra ▴ 550
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17k
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Comment: C: CPM read count normalization: what does it mean between replicates of same group
5.6 years ago by salamandra ▴ 550
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1
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8.3k
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Comment: C: DESeq2 design formula: how to use the opposite interaction term?
5.6 years ago by salamandra ▴ 550
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1
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8.3k
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Comment: C: DESeq2 design formula: how to use the opposite interaction term?
5.6 years ago by salamandra ▴ 550
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1
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14k
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Comment: C: BioMart: connection fails
5.7 years ago by salamandra ▴ 550
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14k
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Comment: C: BioMart: connection fails
5.7 years ago by salamandra ▴ 550
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1
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14k
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Comment: A: BioMart: connection fails
5.7 years ago by salamandra ▴ 550
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2.7k
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Comment: C: Tool that can split genes into groups with similar expression pattern overtime
5.9 years ago by salamandra ▴ 550
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1
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2.7k
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Comment: C: Tool that can split genes into groups with similar expression pattern overtime
5.9 years ago by salamandra ▴ 550
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1
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2.7k
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Comment: C: Tool that can split genes into groups with similar expression pattern overtime
5.9 years ago by salamandra ▴ 550
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2.7k
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Comment: C: Deseq2: What is the most correct experimental design for this experiment?
5.9 years ago by salamandra ▴ 550
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1
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2.7k
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Comment: C: Deseq2: What is the most correct experimental design for this experiment?
5.9 years ago by salamandra ▴ 550
0
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1
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2.7k
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Comment: C: Deseq2: What is the most correct experimental design for this experiment?
5.9 years ago by salamandra ▴ 550
0
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1
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2.7k
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Comment: C: Deseq2: What is the most correct experimental design for this experiment?
5.9 years ago by salamandra ▴ 550
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3.2k
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Comment: C: Know if a pathway is being functionally activated or repressed by a group of up-
5.9 years ago by salamandra ▴ 550
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0
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3.2k
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Comment: C: Know if a pathway is being functionally activated or repressed by a group of up-
5.9 years ago by salamandra ▴ 550
0
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1
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2.7k
views
Comment: C: Deseq2: What is the most correct experimental design for this experiment?
5.9 years ago by salamandra ▴ 550
0
votes
1
reply
2.7k
views
Comment: C: Deseq2: What is the most correct experimental design for this experiment?
5.9 years ago by salamandra ▴ 550
0
votes
1
reply
2.7k
views
Comment: C: Deseq2: What is the most correct experimental design for this experiment?
5.9 years ago by salamandra ▴ 550
1
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0
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6.2k
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Comment: C: Homer error (findMotifs.pl) : are you sure you chose the right length for motif
6.0 years ago by salamandra ▴ 550
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1
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5.0k
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Comment: C: How to use a specific promoter set on findMotifs.pl of HOMER?
6.0 years ago by salamandra ▴ 550
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1
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5.0k
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Comment: C: How to use a specific promoter set on findMotifs.pl of HOMER?
6.0 years ago by salamandra ▴ 550
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1
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5.0k
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Comment: C: How to use a specific promoter set on findMotifs.pl of HOMER?
6.0 years ago by salamandra ▴ 550
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1
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5.0k
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Comment: C: How to use a specific promoter set on findMotifs.pl of HOMER?
6.0 years ago by salamandra ▴ 550
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0
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5.0k
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Comment: C: How to use a specific promoter set on findMotifs.pl of HOMER?
6.0 years ago by salamandra ▴ 550
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1
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5.0k
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Comment: C: How to use a specific promoter set on findMotifs.pl of HOMER?
6.0 years ago by salamandra ▴ 550
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2.2k
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Comment: C: How to mask motif in HOMER?
6.0 years ago by salamandra ▴ 550
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1
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5.0k
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Comment: C: How to use a specific promoter set on findMotifs.pl of HOMER?
updated 6.0 years ago by 144k • written 6.0 years ago by ▴ 550
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1.5k
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Comment: C: Does Bowtie2 index use haplotypes and patches? and is the reference genome of Bo
6.0 years ago by salamandra ▴ 550
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