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Answer: A: How to obtain insert sequence from paired-end mapping result (SAM/BAM)
9.0 years ago by Fabio Marroni ★ 3.0k
2
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1
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3.0k
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Answer: C: GT calls and PL values in VCF
9.0 years ago by Fabio Marroni ★ 3.0k
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2.0k
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GATK calls two overlapping homozyogous indels in consecutive bases in a single sample
GATK indels variants
9.0 years ago by Fabio Marroni ★ 3.0k
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Comment: C: Paternity index with snp mutation
9.1 years ago by Fabio Marroni ★ 3.0k
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Comment: C: TopHat deletions and insertions
9.1 years ago by Fabio Marroni ★ 3.0k
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2.5k
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Answer: A: TopHat deletions and insertions
9.1 years ago by Fabio Marroni ★ 3.0k
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1.7k
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Comment: C: whole genome analysis
9.1 years ago by Fabio Marroni ★ 3.0k
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1.7k
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Answer: A: whole genome analysis
9.1 years ago by Fabio Marroni ★ 3.0k
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4.6k
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Answer: A: Calculating variant frequency in R
9.1 years ago by Fabio Marroni ★ 3.0k
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2.8k
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Answer: A: How do scientists identify new genes/SNP as candidates for GWAS studies?
9.2 years ago by Fabio Marroni ★ 3.0k
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1
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2.5k
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Comment: C: variant phred scale of plant genome
9.2 years ago by Fabio Marroni ★ 3.0k
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1
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2.6k
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Answer: A: PLINK SNP data
9.2 years ago by Fabio Marroni ★ 3.0k
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2.1k
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Answer: A: Evaluating the Genome aseemblies
9.3 years ago by Fabio Marroni ★ 3.0k
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1
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2.3k
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Comment: C: RNA-seq: Comparing 2 strains (same experimental conditions)
9.3 years ago by Fabio Marroni ★ 3.0k
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4.8k
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Comment: C: How to improve the pipeline of call snp in RNA-seq?
9.3 years ago by Fabio Marroni ★ 3.0k
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1
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2.3k
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Comment: C: CuffDiff hangs at same point
9.3 years ago by Fabio Marroni ★ 3.0k
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1
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6.1k
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Comment: C: VCF file without SNPs
9.3 years ago by Fabio Marroni ★ 3.0k
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8.2k
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Answer: A: Input format for SNP data in Arlequin
9.4 years ago by Fabio Marroni ★ 3.0k
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2.1k
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Comment: C: help with PHASE 2.1 program
9.4 years ago by Fabio Marroni ★ 3.0k
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2.1k
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Comment: C: why distance limit for pairwise LD calculation is 500K in SNAP ?
9.4 years ago by Fabio Marroni ★ 3.0k
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2.1k
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Answer: A: Linkage Disequilibrium to Rare SNPs
9.4 years ago by Fabio Marroni ★ 3.0k
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2.1k
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Comment: C: Annotation result with lots of Hypothetical protein
9.4 years ago by Fabio Marroni ★ 3.0k
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0
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2.1k
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Comment: C: Must all samples in an eQTL analysis come from unrelated individuals?
9.4 years ago by Fabio Marroni ★ 3.0k
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8.2k
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Comment: C: Input format for SNP data in Arlequin
9.4 years ago by Fabio Marroni ★ 3.0k
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3.3k
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Comment: C: calling phased variants
9.5 years ago by Fabio Marroni ★ 3.0k
1
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3.6k
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Answer: A: Obtaining fastPHASE tool
9.5 years ago by Fabio Marroni ★ 3.0k
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2.0k
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Answer: A: Which Illumina data to generate for constructing benchmark SNP / SV genotypes
9.5 years ago by Fabio Marroni ★ 3.0k
2
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5.4k
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Comment: C: beta coefficient for METAL input
9.5 years ago by Fabio Marroni ★ 3.0k
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4.6k
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Comment: C: what does Num_Probes in a segmentation file refer to?
9.5 years ago by Fabio Marroni ★ 3.0k
2
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1
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5.4k
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Comment: C: beta coefficient for METAL input
9.5 years ago by Fabio Marroni ★ 3.0k
1
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1
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4.6k
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Comment: C: what does Num_Probes in a segmentation file refer to?
9.5 years ago by Fabio Marroni ★ 3.0k
2
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3
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5.4k
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Answer: A: beta coefficient for METAL input
9.5 years ago by Fabio Marroni ★ 3.0k
2
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1
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4.6k
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Answer: A: what does Num_Probes in a segmentation file refer to?
9.5 years ago by Fabio Marroni ★ 3.0k
0
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0
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1.6k
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Comment: C: How many loci can expect from cufflinks output
9.5 years ago by Fabio Marroni ★ 3.0k
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0
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4.0k
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Comment: C: Deferentially expressed genes from FPKM values?
9.5 years ago by Fabio Marroni ★ 3.0k
0
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0
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2.0k
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Comment: Comment: best qPCR normalisation method
updated 3.2 years ago by 45k • written 9.6 years ago by ★ 3.0k
1
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1
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4.0k
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Answer: A: Deferentially expressed genes from FPKM values?
9.7 years ago by Fabio Marroni ★ 3.0k
1
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0
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4.3k
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Comment: C: calculation of mean length with its standard deviation of transcriptome assembly
9.7 years ago by Fabio Marroni ★ 3.0k
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1.7k
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Comment: C: tophat2 aligment ratio reduced when increase insert size
9.7 years ago by Fabio Marroni ★ 3.0k
18
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7
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24k
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Bwa-Mem: Discriminate Between Reads Mapping Uniquely And Those Mapping In Multiple Positions
alignment next-gen bwa
updated 10.0 years ago by 20 • written 12.2 years ago by ★ 3.0k
0
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3.5k
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Comment: C: Fasta Alternate Reference Maker extracted fasta files are same as reference
10.1 years ago by Fabio Marroni ★ 3.0k
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1
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2.0k
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Comment: Comment: qvalue problem in mutation dataset
updated 2.9 years ago by 45k • written 10.1 years ago by ★ 3.0k
0
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0
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2.9k
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Comment: Comment: How to calculate FPKM from the reads mapped to two genomes
updated 2.9 years ago by 45k • written 10.2 years ago by ★ 3.0k
0
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1
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3.6k
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Comment: Comment: Is there any tool to convert blastx format from tabular to xml for feeding it to
updated 2.9 years ago by 45k • written 10.2 years ago by ★ 3.0k
3
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1
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2.5k
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Comment: Comment: error in R
updated 2.8 years ago by 45k • written 10.2 years ago by ★ 3.0k
1
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2
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2.6k
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Answer: Answer: Conversion of old pileup file to more useful format
updated 2.8 years ago by 45k • written 10.2 years ago by ★ 3.0k
1
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0
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5.6k
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Answer: Answer: PED & MAP file extension
updated 2.8 years ago by 45k • written 10.2 years ago by ★ 3.0k
1
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0
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5.0k
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Comment: Comment: From fastq file to vcf file (inconsistent vcf file from two methods)
updated 2.7 years ago by 45k • written 10.3 years ago by ★ 3.0k
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0
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5.7k
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Comment: C: bam processing before variant calling
10.4 years ago by Fabio Marroni ★ 3.0k
1
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1
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5.7k
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Answer: Answer: bam processing before variant calling
updated 3.2 years ago by 45k • written 10.4 years ago by ★ 3.0k
468 results • Page 8 of 10
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