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DESeq2 with a small number of genes
DESeq2 SARTools RNA-Seq Count-normalisation
updated 2.7 years ago by ▴ 80 • written 7.5 years ago by ▴ 660
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Answer: A: How to judge the similarity of two genes from the alignment?
updated 4.4 years ago by 43k • written 8.5 years ago by ▴ 660
1
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1.6k
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Answer: A: How to map sequences to existing phylogenetic tree
updated 4.4 years ago by 43k • written 8.5 years ago by ▴ 660
3
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1.7k
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Answer: Answer: Why not Windows
updated 12 months ago by 43k • written 8.5 years ago by ▴ 660
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4.2k
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Answer: A: Phred Score/Base quality score in Pysam
updated 4.4 years ago by 43k • written 8.6 years ago by ▴ 660
1
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1
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3.1k
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Answer: A: Wrapping protein sequence output using python
updated 4.4 years ago by 43k • written 8.6 years ago by ▴ 660
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1
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2.2k
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Comment: C: Trim barcode 3'
updated 4.4 years ago by 43k • written 8.6 years ago by ▴ 660
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3.4k
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Answer: A: Downloading protein sequences for a set of chromosomes from NCBI
updated 4.4 years ago by 43k • written 8.6 years ago by ▴ 660
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0
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3.9k
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Answer: A: docking site in pymol
updated 4.4 years ago by 43k • written 8.7 years ago by ▴ 660
7
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1
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36k
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Answer: A: nr- protein database
updated 4.4 years ago by 43k • written 8.7 years ago by ▴ 660
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0
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2.8k
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Comment: C: NGS microRNA (smRNA) analysis
updated 4.4 years ago by 43k • written 8.7 years ago by ▴ 660
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2.0k
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Answer: A: Parsing error using Entrez.read (BioPython)
updated 4.4 years ago by 43k • written 8.7 years ago by ▴ 660
2
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0
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3.0k
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Answer: Answer: Replacement of fasta file header
updated 18 months ago by 43k • written 8.7 years ago by ▴ 660
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1.2k
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Answer: A: removing a part of sequence of all genes
6.5 years ago by glihm ▴ 660
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1
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2.1k
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Answer: A: transcript and fasta sequence
6.5 years ago by glihm ▴ 660
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2.1k
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Comment: C: transcript and fasta sequence
6.5 years ago by glihm ▴ 660
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1.3k
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Comment: C: formatting problem (awk/bash)
6.5 years ago by glihm ▴ 660
1
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1
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1.2k
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Comment: C: How can I replace pathway names with gene names?
6.5 years ago by glihm ▴ 660
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1.7k
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Comment: C: RPKM documentation is needed!
6.5 years ago by glihm ▴ 660
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2
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3.1k
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Comment: C: warning message after Deseq2
6.5 years ago by glihm ▴ 660
3
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1
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7.9k
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Answer: A: how to remove Overrepresented sequences for paired end with cutadapt?
6.5 years ago by glihm ▴ 660
1
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1
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2.4k
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Comment: C: Sam FLAGS : how could a read be described as "read unmapped" but "read in revers
6.5 years ago by glihm ▴ 660
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0
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3.5k
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Comment: C: Choosing sam flags to extract all reads mapped to 5' -> 3' OR 3' -> 5' of refere
6.5 years ago by glihm ▴ 660
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1
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3.0k
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Comment: C: fastx toolkit error
6.5 years ago by glihm ▴ 660
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3.0k
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Comment: C: fastx toolkit error
6.5 years ago by glihm ▴ 660
1
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1
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1.4k
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Comment: C: Delete ID only if not presnt in next line (lines are in pair)
6.5 years ago by glihm ▴ 660
0
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1
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3.5k
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Answer: A: Choosing sam flags to extract all reads mapped to 5' -> 3' OR 3' -> 5' of refere
6.5 years ago by glihm ▴ 660
2
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1
reply
2.4k
views
Answer: A: Sam FLAGS : how could a read be described as "read unmapped" but "read in revers
6.5 years ago by glihm ▴ 660
0
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1
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3.5k
views
Comment: C: Choosing sam flags to extract all reads mapped to 5' -> 3' OR 3' -> 5' of refere
6.5 years ago by glihm ▴ 660
2
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1
reply
3.7k
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Answer: A: Removing rRNA,tRNA,snoRNA, etc from miRNA sequence data
6.5 years ago by glihm ▴ 660
0
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0
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2.0k
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Comment: C: Need help to retrive sequences
6.5 years ago by glihm ▴ 660
0
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1
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2.1k
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Answer: A: counting the reads that mapped to a part of transcriptome
6.5 years ago by glihm ▴ 660
1
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0
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1.4k
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Answer: A: general question about strand D and R
6.5 years ago by glihm ▴ 660
0
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0
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1.4k
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Comment: C: general question about strand D and R
6.5 years ago by glihm ▴ 660
1
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0
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6.1k
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Comment: C: Selecting One Ensembl Transcript Id For Each Ensembl Gene Id
6.5 years ago by glihm ▴ 660
0
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1
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1.8k
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Comment: C: Using SeqAn and other external libraries in C++
6.5 years ago by glihm ▴ 660
1
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1
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1.3k
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Comment: C: isolating in frame reads from a file
6.5 years ago by glihm ▴ 660
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0
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1.3k
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Answer: A: isolating in frame reads from a file
6.5 years ago by glihm ▴ 660
1
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0
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2.1k
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Answer: A: bowtie -n aligment mode
6.5 years ago by glihm ▴ 660
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0
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3.1k
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Comment: C: Trim Primers from FASTQ file
6.6 years ago by glihm ▴ 660
0
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0
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5.3k
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Comment: C: Python Regular Expressions to extract the transcript ID from lines of GTF file
6.6 years ago by glihm ▴ 660
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0
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5.3k
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Comment: C: Python Regular Expressions to extract the transcript ID from lines of GTF file
6.6 years ago by glihm ▴ 660
0
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1
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5.3k
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Answer: A: Python Regular Expressions to extract the transcript ID from lines of GTF file
6.6 years ago by glihm ▴ 660
0
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0
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2.5k
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Comment: C: Problems getting read number per gene after sequencing
6.7 years ago by glihm ▴ 660
1
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1
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2.5k
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Answer: A: Problems getting read number per gene after sequencing
6.7 years ago by glihm ▴ 660
3
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0
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4.2k
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Answer: A: how to adjust BAM header after extracting only mapped reads from BAM files
6.7 years ago by glihm ▴ 660
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0
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3.6k
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Answer: A: Splitting a fasta file on the basis of header barcodes
6.8 years ago by glihm ▴ 660
2
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0
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1.3k
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Answer: A: slect reference genes from transriptome data
6.8 years ago by glihm ▴ 660
0
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1
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3.2k
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Comment: C: Blast+ Sam outfmt parameter check
6.8 years ago by glihm ▴ 660
2
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0
replies
1.9k
views
Answer: A: Fastx tools no output?
6.8 years ago by glihm ▴ 660
107 results • Page 1 of 3
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