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Answer: Answer: Does it possible to know what are the adjacent genes up to 1000bp upstream and
7 days ago by Alex Reynolds 34k
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740
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Comment: Comment: gtf2bed not converting to bed
11 days ago by Alex Reynolds 34k
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740
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Comment: Comment: gtf2bed not converting to bed
13 days ago by Alex Reynolds 34k
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740
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Comment: Comment: gtf2bed not converting to bed
14 days ago by Alex Reynolds 34k
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740
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Answer: Answer: gtf2bed not converting to bed
14 days ago by Alex Reynolds 34k
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310
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Answer: Answer: How do you get functional/biological role of motifs?
9 weeks ago by Alex Reynolds 34k
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437
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Comment: Comment: Merging and intersecting genomic ranges for an indefinite number of files
3 months ago by Alex Reynolds 34k
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437
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Answer: Answer: Merging and intersecting genomic ranges for an indefinite number of files
3 months ago by Alex Reynolds 34k
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437
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Answer: Answer: Merging and intersecting genomic ranges for an indefinite number of files
3 months ago by Alex Reynolds 34k
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455
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Answer: Answer: How can I use nohup command when filtering SNPs?
3 months ago by Alex Reynolds 34k
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583
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Answer: Answer: Bedtools merge but only if intersection exists
4 months ago by Alex Reynolds 34k
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288
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Comment: Comment: trackBrowser: Visualization of sequencing data within a given genome region
4 months ago by Alex Reynolds 34k
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2.3k
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Comment: Comment: Laptops for bioinformatics
4 months ago by Alex Reynolds 34k
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692
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Comment: Comment: How to find overlapping regions in a single bed file
6 months ago by Alex Reynolds 34k
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692
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Answer: Answer: How to find overlapping regions in a single bed file
6 months ago by Alex Reynolds 34k
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336
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Comment: Comment: Unable to install bedops and bedtools on windows 11
7 months ago by Alex Reynolds 34k
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1.0k
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Comment: Comment: Count regions that overlap with python
8 months ago by Alex Reynolds 34k
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1.0k
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Comment: Comment: Count regions that overlap with python
8 months ago by Alex Reynolds 34k
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1.0k
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Answer: Answer: Count regions that overlap with python
8 months ago by Alex Reynolds 34k
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919
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Answer: Answer: Best formats for storing large amounts of data for random access
8 months ago by Alex Reynolds 34k
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281
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Answer: Answer: Visualization of trascription factor family grouped by biological function
8 months ago by Alex Reynolds 34k
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48k
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Comment: Comment: How Can I Know The Length Of Mapped Reads From Bam File?
8 months ago by Alex Reynolds 34k
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1.1k
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Answer: Answer: GFF to BED conversion
9 months ago by Alex Reynolds 34k
2
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642
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Answer: Answer: Mapping chromosome location to gene ID
9 months ago by Alex Reynolds 34k
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531
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Answer: Answer: Comparing bed files for shifts and enlargements
9 months ago by Alex Reynolds 34k
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963
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Comment: Comment: qualimap - bed file error - BED format error, there should be at least 6 fields.
9 months ago by Alex Reynolds 34k
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634
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Answer: Answer: How to create bed file from list of variants with indels and bp values
10 months ago by Alex Reynolds 34k
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791
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Comment: Comment: sliding windows over genome
10 months ago by Alex Reynolds 34k
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834
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Comment: Comment: Can I successfully go from a bed file (narrowpeak) back to a bam file containing
10 months ago by Alex Reynolds 34k
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791
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Answer: Answer: sliding windows over genome
10 months ago by Alex Reynolds 34k
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1
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5.3k
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Comment: Comment: Finding Chip Seq Overlaps with Bed files
10 months ago by Alex Reynolds 34k
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475
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Answer: Answer: "moving average" function for "coverage" signal in bed files?
10 months ago by Alex Reynolds 34k
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603
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Answer: Answer: How to interpret similar motifs in Homer results
10 months ago by Alex Reynolds 34k
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627
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Comment: Comment: Why the bed file not recognized as a bed file
11 months ago by Alex Reynolds 34k
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627
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Answer: Answer: Why the bed file not recognized as a bed file
11 months ago by Alex Reynolds 34k
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1
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756
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Answer: Answer: Circos plot
11 months ago by Alex Reynolds 34k
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587
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Answer: Answer: SARS-CoV-2 genome on NCBI website
11 months ago by Alex Reynolds 34k
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627
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Answer: Answer: deeptools plotHeatMap - Convert bed files to gene list?
12 months ago by Alex Reynolds 34k
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1
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627
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Comment: Comment: deeptools plotHeatMap - Convert bed files to gene list?
12 months ago by Alex Reynolds 34k
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574
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Comment: Comment: Find genes of interest in large unannotated genome files
12 months ago by Alex Reynolds 34k
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4
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1.7k
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How to iterate over rows of pyranges object
pyranges
updated 12 months ago by ▴ 10 • written 2.0 years ago by 34k
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574
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Answer: Answer: Find genes of interest in large unannotated genome files
12 months ago by Alex Reynolds 34k
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468
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Answer: Answer: bedtools -u not giving unique files
12 months ago by Alex Reynolds 34k
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958
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Answer: Answer: How to convert .wib files to .wig or .bed?
13 months ago by Alex Reynolds 34k
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532
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Comment: Comment: Determining the transcription factor activators for a particular gene
13 months ago by Alex Reynolds 34k
6
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751
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Answer: Answer: Map genomic coordinate to specific chromosome region
13 months ago by Alex Reynolds 34k
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615
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Answer: Answer: TET2 Binding Motifs BED file
13 months ago by Alex Reynolds 34k
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508
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Comment: Comment: Non-zero return code 127 from
13 months ago by Alex Reynolds 34k
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0
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1.2k
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Answer: Answer: Tips and tricks to improve data visualization in bioinformatics
13 months ago by Alex Reynolds 34k
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0
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1.0k
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Comment: Comment: Mince a vcf into n bins of a given range
14 months ago by Alex Reynolds 34k
2,802 results • Page 1 of 57
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