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11k
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Comment: Comment: Tried building a compact sequence format with 4-bit storage
8 weeks ago by Alex Reynolds 36k
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11k
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Comment: Comment: Tried building a compact sequence format with 4-bit storage
9 weeks ago by Alex Reynolds 36k
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801
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Comment: Comment: Creating sliding window for methylation data
3 months ago by Alex Reynolds 36k
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801
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Answer: Answer: Creating sliding window for methylation data
3 months ago by Alex Reynolds 36k
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877
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Comment: Comment: error in the output of bedops
6 months ago by Alex Reynolds 36k
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600
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Answer: Answer: How to find motif in specific region
6 months ago by Alex Reynolds 36k
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1.0k
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Comment: Comment: Efficiently find regions in bed file that are within start and end regions of an
6 months ago by Alex Reynolds 36k
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845
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Comment: Comment: What are BED files?
6 months ago by Alex Reynolds 36k
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1.5k
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Answer: Answer: Incorrect gene naming (SYMBOL)
9 months ago by Alex Reynolds 36k
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1.2k
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Comment: Comment: High memory sorting of kmers - best way to use sort
9 months ago by Alex Reynolds 36k
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1.2k
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Answer: Answer: High memory sorting of kmers - best way to use sort
9 months ago by Alex Reynolds 36k
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1
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1.1k
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Comment: Comment: bigWig size difference between variableStep and fixedStep wig files
9 months ago by Alex Reynolds 36k
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1.1k
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Comment: Comment: bigWig size difference between variableStep and fixedStep wig files
9 months ago by Alex Reynolds 36k
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1.1k
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Answer: Answer: bigWig size difference between variableStep and fixedStep wig files
9 months ago by Alex Reynolds 36k
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2.1k
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Comment: Comment: ChromHMM - annotation of chromatin states
9 months ago by Alex Reynolds 36k
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2.1k
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Comment: Comment: ChromHMM - annotation of chromatin states
10 months ago by Alex Reynolds 36k
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1
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2.1k
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Answer: Answer: ChromHMM - annotation of chromatin states
10 months ago by Alex Reynolds 36k
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1.5k
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Answer: Answer: How to filter and keep longest isoform per gene in gff3 file ?
12 months ago by Alex Reynolds 36k
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0
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944
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Answer: Answer: mappability regions
13 months ago by Alex Reynolds 36k
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1
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2.3k
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Comment: Comment: ATAC-seq peaks centered between TSS and TES
13 months ago by Alex Reynolds 36k
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1
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2.4k
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Comment: Comment: A simple and lightweight tool for filtering csv file wirtten in Rust
14 months ago by Alex Reynolds 36k
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1.0k
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Comment: Comment: Programmatic JS ways to get interesting information about genes by symbol or acc
16 months ago by Alex Reynolds 36k
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2
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1.0k
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Programmatic JS ways to get interesting information about genes by symbol or accession ID
javascript metadata gene annotation
16 months ago by Alex Reynolds 36k
2
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0
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1.1k
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Answer: Answer: Maximum bits in ggseqlogo is less then 2?
17 months ago by Alex Reynolds 36k
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1
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818
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Automated methods for comparing trees
distance agglomerative compare tree
updated 17 months ago by ★ 30k • written 17 months ago by 36k
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2.9k
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Comment: Comment: Create a new bed file with all pairwise combinations between two other bed files
18 months ago by Alex Reynolds 36k
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2.7k
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Comment: Comment: Overlapping Ranges within Granges object
18 months ago by Alex Reynolds 36k
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1
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2.7k
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Answer: Answer: Overlapping Ranges within Granges object
18 months ago by Alex Reynolds 36k
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0
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1.7k
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Comment: Comment: Bedtools merge minimum overlap?
18 months ago by Alex Reynolds 36k
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2
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2.9k
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Answer: Answer: Create a new bed file with all pairwise combinations between two other bed files
19 months ago by Alex Reynolds 36k
4
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1
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4.6k
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Comment: Comment: Bioinformatician who was retaliated against after reporting discriminatory haras
19 months ago by Alex Reynolds 36k
1
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0
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837
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Answer: Answer: How to highlight genes on genome visual reprezentation/what tool to use?
19 months ago by Alex Reynolds 36k
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0
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9.8k
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Comment: Comment: Intersect multiple BED files
20 months ago by Alex Reynolds 36k
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1
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1.6k
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Comment: Comment: Coverage depth map of genome from multiple sample coverage bedgraphs?
20 months ago by Alex Reynolds 36k
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0
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1.0k
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Answer: Answer: Error occurs when migrate-n software performs "make mpis"
20 months ago by Alex Reynolds 36k
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1
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1.6k
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Comment: Comment: Coverage depth map of genome from multiple sample coverage bedgraphs?
20 months ago by Alex Reynolds 36k
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1
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1.6k
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Answer: Answer: Coverage depth map of genome from multiple sample coverage bedgraphs?
20 months ago by Alex Reynolds 36k
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0
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3.2k
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Answer: Answer: Convert Gene symbol to Ensembl ID
20 months ago by Alex Reynolds 36k
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0
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1.3k
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Comment: Comment: Genes with multiple chromosome locations
20 months ago by Alex Reynolds 36k
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1
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3.2k
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Comment: Comment: Convert Gene symbol to Ensembl ID
20 months ago by Alex Reynolds 36k
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1
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3.2k
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Comment: Comment: Convert Gene symbol to Ensembl ID
20 months ago by Alex Reynolds 36k
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0
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21k
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Comment: Comment: BEDOPS gtf2bed conversion error with Ensembl GTF
21 months ago by Alex Reynolds 36k
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0
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1.4k
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Comment: Comment: line 164: 15342 Segmentation fault (core dumped) ${cmd} ${options} - 0<&0
21 months ago by Alex Reynolds 36k
2
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0
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1.4k
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Answer: Answer: line 164: 15342 Segmentation fault (core dumped) ${cmd} ${options} - 0<&0
21 months ago by Alex Reynolds 36k
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0
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2.7k
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Comment: Comment: Random Access remote BAM files
21 months ago by Alex Reynolds 36k
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1
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2.7k
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Comment: Comment: Random Access remote BAM files
21 months ago by Alex Reynolds 36k
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1
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2.7k
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Comment: Comment: Random Access remote BAM files
21 months ago by Alex Reynolds 36k
1
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1
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2.7k
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Answer: Answer: Random Access remote BAM files
21 months ago by Alex Reynolds 36k
2
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1
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1.4k
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Answer: Answer: Double counts with bedtools intersect?
22 months ago by Alex Reynolds 36k
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0
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4.1k
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Comment: Comment: Some lines are not well organized in BED file, how to correct them ? Thanks a lo
22 months ago by Alex Reynolds 36k
2,902 results • Page 1 of 59
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