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Answer: Answer: PRSice-2 without Ref SNP ID
2.7 years ago by Lemire ▴ 940
3
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0
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1.6k
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Answer: Answer: When running pca with GCTA, why are there the same number of eigenvalues as the
2.7 years ago by Lemire ▴ 940
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0
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787
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Answer: Answer: normality assumption for GWAS QT
2.7 years ago by Lemire ▴ 940
2
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1
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1.3k
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Answer: Answer: GWASpower calculation
2.8 years ago by Lemire ▴ 940
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1
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2.1k
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Answer: Answer: SNP Pruning Through PCA
2.8 years ago by Lemire ▴ 940
2
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0
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1.7k
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Answer: Answer: Why do I get a big log fold change but small mean change in b value when plottin
2.8 years ago by Lemire ▴ 940
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0
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2.3k
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Answer: Answer: How do I log into this ftp server and look around?
2.8 years ago by Lemire ▴ 940
0
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1
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856
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Answer: Answer: alternatives to replication for GWAS
2.9 years ago by Lemire ▴ 940
0
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0
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1.1k
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Answer: Answer: How can I do hypothesis test for continuous dependent variable and two categoric
2.9 years ago by Lemire ▴ 940
3
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1
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1.3k
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Answer: Answer: Very high Beta coefficients in --glm output in plink2
2.9 years ago by Lemire ▴ 940
2
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0
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2.6k
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Answer: Answer: GCTA make GRM error contains illegal chr number
2.9 years ago by Lemire ▴ 940
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2.1k
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Answer: Answer: Correcting for multiple testing: 12 multiple regressions, with several covariate
3.0 years ago by Lemire ▴ 940
1
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0
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1.2k
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Answer: Answer: PLINK Clumping d-prime or r2?
3.0 years ago by Lemire ▴ 940
2
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1
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3.2k
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Answer: Answer: How to produce a heatmap by keeping the original data and a log color scale?
3.0 years ago by Lemire ▴ 940
0
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0
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1.5k
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Answer: Answer: How to find the standard error when the GWAS summary data does not provide?
3.1 years ago by Lemire ▴ 940
0
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0
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2.3k
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Answer: Answer: How to connect HLA alleles with rsID?
3.1 years ago by Lemire ▴ 940
0
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1
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1.3k
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Answer: Answer: How to produce overlapping QQ-plot from GWAS results?
3.1 years ago by Lemire ▴ 940
0
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1
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3.6k
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Answer: A: GT 2/3, or 3/3 or 2/2 in vcf
4.1 years ago by Lemire ▴ 940
1
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0
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870
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Answer: A: Adding dosage for a SNP as a covariate to a phenotype file
4.1 years ago by Lemire ▴ 940
0
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1
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3.7k
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Answer: A: IDAT to VCF conversion
4.1 years ago by Lemire ▴ 940
2
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1
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2.7k
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Answer: A: Meta-Analysis effect size is not in the same direction as GWAS effect sizes.
4.2 years ago by Lemire ▴ 940
0
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0
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1.3k
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Answer: A: GCTA tool for case-control association analysis
4.3 years ago by Lemire ▴ 940
1
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1
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759
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Answer: A: Variant association analysis with both related and unrelated individuals
4.3 years ago by Lemire ▴ 940
3
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0
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6.4k
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Answer: A: IGV not showing the variants detected by GATK and Varscan
updated 4.5 years ago by 44k • written 8.5 years ago by ▴ 940
1
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2
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3.2k
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Answer: A: LOD score of a single genotype
updated 4.5 years ago by 44k • written 8.5 years ago by ▴ 940
0
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0
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3.0k
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Answer: A: Armitage's trend test for the 2x3 genotype table
updated 4.5 years ago by 44k • written 8.5 years ago by ▴ 940
0
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1
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15k
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Answer: A: BWA mem how to know if a read is mapped uniquely?
updated 4.5 years ago by 44k • written 8.5 years ago by ▴ 940
3
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0
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1.8k
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Answer: A: Non A T G C base in RefSeq zebrafish mRNA sequence
updated 4.5 years ago by 44k • written 8.5 years ago by ▴ 940
0
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0
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3.1k
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Answer: A: p value with age and sex covariates in linear model in plink
updated 4.5 years ago by 44k • written 8.5 years ago by ▴ 940
2
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0
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3.4k
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Answer: A: Looking for clean list of gene names for UCSC's HG19
updated 4.5 years ago by 44k • written 8.5 years ago by ▴ 940
1
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0
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8.1k
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Answer: A: trim_galore and cutadapt to paired-end DNA sequencing
updated 4.5 years ago by 44k • written 8.5 years ago by ▴ 940
4
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2
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1.6k
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Answer: A: logistic regression using HLA alllelic data
4.5 years ago by Lemire ▴ 940
1
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1
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7.6k
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Answer: A: Impute presence of HLA-B27 antigen in individual genome
updated 4.5 years ago by 44k • written 8.5 years ago by ▴ 940
1
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1
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2.4k
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Answer: A: BWA parameters control output
updated 4.5 years ago by 44k • written 8.5 years ago by ▴ 940
2
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0
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5.4k
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Answer: A: How to download dbGaP CF Genotype-Tissue Expression Project (GTEx) data set
updated 4.5 years ago by 44k • written 8.6 years ago by ▴ 940
6
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2
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7.0k
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Answer: A: How to make Q-Q plots for different models at a single chart using R?
4.5 years ago by Lemire ▴ 940
2
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0
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6.1k
views
Answer: A: DESeq PCA plot and edgeR MDS plot
updated 4.5 years ago by 44k • written 8.6 years ago by ▴ 940
0
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1
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2.1k
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Answer: A: Normalization of Affymetrix data
updated 4.5 years ago by 44k • written 8.6 years ago by ▴ 940
1
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1
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3.5k
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Answer: A: association test using plink
updated 4.5 years ago by 44k • written 8.6 years ago by ▴ 940
0
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0
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880
views
Answer: A: GWAS in mixed populations
4.5 years ago by Lemire ▴ 940
4
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1
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32k
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Answer: A: Bioconductor : Setting local install directory for packages
updated 4.5 years ago by 44k • written 8.7 years ago by ▴ 940
0
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0
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724
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Answer: A: Estimating heritability of a trait from data containing siblings
4.6 years ago by Lemire ▴ 940
2
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0
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801
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Answer: A: Regression models on genetic data
4.8 years ago by Lemire ▴ 940
0
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1
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1.5k
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Answer: A: Infinium MethylationEPIC BeadChip probes with cross-hybridisation potential
5.1 years ago by Lemire ▴ 940
3
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1
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4.1k
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Answer: A: Whole exome sequencing data, rare variants and QQ-plots
updated 5.7 years ago by 11k • written 8.0 years ago by ▴ 940
1
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0
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3.2k
views
Answer: A: Is okay to apply ANOVA to Log2 transformed data ?
7.6 years ago by Lemire ▴ 940
4
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1
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4.1k
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Answer: A: Bioinformatics analyses hall of shame
8.0 years ago by Lemire ▴ 940
2
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2
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1.9k
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Answer: A: How to Assess Paired Sample Data from WES
8.0 years ago by Lemire ▴ 940
1
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0
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1.7k
views
Answer: A: Why are there too many mutations in controls, but not in tumour?
8.1 years ago by Lemire ▴ 940
1
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1
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2.2k
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Answer: A: Enrichment analysis using a random distribution for mean and standard deviation
8.6 years ago by Lemire ▴ 940
52 results • Page 1 of 2
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