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How to run a set or batch of genome assemblies at once in one go?
genome Assembly genomics software
updated 13 months ago by 43k • written 8.2 years ago by ▴ 10
4
votes
14
replies
4.7k
views
How to check for contamination by one contaminant across multiple whole genome sequenced samples?
alignment sequencing genomics
updated 13 months ago by 43k • written 7.9 years ago by ▴ 10
1
vote
3
replies
3.2k
views
how to locate a gene sequence among fastq files containing short reads
ncbi blast genome
updated 13 months ago by 43k • written 7.9 years ago by ▴ 10
4
votes
4
replies
3.5k
views
how to BLAST search for known genes in local set of genomes?
ncbi blast genome
updated 13 months ago by 43k • written 8.1 years ago by ▴ 10
2
votes
4
replies
7.2k
views
what should I use for reference guided assembly of bacterial genomes intended for comparative genomic analyses?
genomics software assembly
updated 13 months ago by 43k • written 8.2 years ago by ▴ 10
0
votes
6
replies
4.7k
views
Should I use Illumina or Ion Torrent for producing data intended for genome resequencing/assembly?
Assembly next-gen illumina genome assembly
updated 8.6 years ago by 7.3k • written 8.6 years ago by ▴ 10
0
votes
5
replies
4.1k
views
Is using MinION to sequence DNA for the purpose of genome assembly a good idea?
minion assembly genome next-gen sequencing
updated 8.6 years ago by ★ 5.1k • written 8.6 years ago by ▴ 10
4
votes
1
reply
4.8k
views
NGS, coverage and read length appropriate for sequencing bacterial DNA with the intention to assemble their genomes?
Assembly genome genomics next-gen-sequencing
updated 20 months ago by 43k • written 8.6 years ago by ▴ 10
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