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2
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Answer: A: Best DOI provider for a custom genome index ?
7.5 years ago by d-cameron ★ 3.0k
1
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12k
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Comment: C: NGS analysis: how to handle paired-end reads
7.5 years ago by d-cameron ★ 3.0k
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0
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1.2k
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Answer: A: How to identify potential target protein of any novel small compound
7.5 years ago by d-cameron ★ 3.0k
1
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1
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2.1k
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Comment: C: Theory v Reality
7.5 years ago by d-cameron ★ 3.0k
1
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1
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2.1k
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Answer: A: Theory v Reality
7.5 years ago by d-cameron ★ 3.0k
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4.8k
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Comment: C: How can I split the soft clipped reads and map the splitted reads again.
7.6 years ago by d-cameron ★ 3.0k
0
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2
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5.3k
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Comment: C: VCF-simplify: a VCF simplification tool.
7.6 years ago by d-cameron ★ 3.0k
3
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1
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5.1k
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Answer: A: Counting soft clipped bases and reads
updated 7.6 years ago by 35k • written 7.6 years ago by ★ 3.0k
0
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0
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6.1k
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Comment: C: Remove clipped reads
7.6 years ago by d-cameron ★ 3.0k
1
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0
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5.7k
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Comment: C: Is indel realigning necessary for INDEL discovery?
7.6 years ago by d-cameron ★ 3.0k
1
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0
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5.1k
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Comment: C: Counting soft clipped bases and reads
7.6 years ago by d-cameron ★ 3.0k
1
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0
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4.8k
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Comment: C: How can I split the soft clipped reads and map the splitted reads again.
7.6 years ago by d-cameron ★ 3.0k
5
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0
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25k
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Answer: A: What's Supplementary Reads?
7.6 years ago by d-cameron ★ 3.0k
3
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1
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4.8k
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Answer: A: How can I split the soft clipped reads and map the splitted reads again.
7.6 years ago by d-cameron ★ 3.0k
0
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0
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2.9k
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Answer: A: Detecting Overlaps within Grange Object
7.6 years ago by d-cameron ★ 3.0k
0
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0
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2.3k
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Answer: A: bwa mem without -M option how to continue using picard
7.6 years ago by d-cameron ★ 3.0k
1
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0
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2.3k
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Answer: A: Does samtools view -b -h <input.bam> -L <input.bed> keep the original header?
7.6 years ago by d-cameron ★ 3.0k
0
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1
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3.0k
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Comment: C: How to get the information of total number of homozygous and heterozygous non-re
7.6 years ago by d-cameron ★ 3.0k
1
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0
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1.6k
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Comment: C: How is the reference genome top level constructed?
7.6 years ago by d-cameron ★ 3.0k
1
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1
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3.2k
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Answer: A: Are there any human genome variant callers and BAM indexing and sorting tools to
7.6 years ago by d-cameron ★ 3.0k
4
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1
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2.9k
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Answer: A: Gold standard datasets
7.6 years ago by d-cameron ★ 3.0k
1
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0
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1.4k
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Answer: A: SNP annotation from RNA-seq data without referene
7.6 years ago by d-cameron ★ 3.0k
1
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0
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1.9k
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Answer: A: Count intron retention reads from BAM files
7.6 years ago by d-cameron ★ 3.0k
0
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0
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2.1k
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Comment: C: What's the difference between 'clipping' and 'unmapped' and 'skipped'?
7.6 years ago by d-cameron ★ 3.0k
1
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0
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2.1k
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Answer: A: What's the difference between 'clipping' and 'unmapped' and 'skipped'?
7.6 years ago by d-cameron ★ 3.0k
4
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0
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1.6k
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Answer: A: How can overlap with paired end sequence??
7.6 years ago by d-cameron ★ 3.0k
1
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0
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3.4k
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Answer: A: How to create dummy VCF with fusion variants
7.6 years ago by d-cameron ★ 3.0k
1
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1
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4.6k
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Comment: C: Number of threads in BWA
7.6 years ago by d-cameron ★ 3.0k
0
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0
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4.6k
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Comment: C: Number of threads in BWA
7.6 years ago by d-cameron ★ 3.0k
4
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0
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4.6k
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Answer: A: Number of threads in BWA
7.6 years ago by d-cameron ★ 3.0k
0
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0
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4.6k
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Comment: C: Number of threads in BWA
7.6 years ago by d-cameron ★ 3.0k
2
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0
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2.1k
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Comment: C: How does Burrows-Wheeler Transformation work on genetic sequences?
7.6 years ago by d-cameron ★ 3.0k
0
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1
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2.3k
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Answer: A: Identifying inserts (tranposable elements) using PE sequencing
7.6 years ago by d-cameron ★ 3.0k
2
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1
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2.3k
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Comment: C: Generation of Consenses Fasta from SAM/BAM
7.6 years ago by d-cameron ★ 3.0k
1
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0
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5.3k
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Comment: C: How to combine multiple tools to detct SVs in WES data
7.6 years ago by d-cameron ★ 3.0k
1
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0
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5.3k
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Comment: C: How to combine multiple tools to detct SVs in WES data
7.6 years ago by d-cameron ★ 3.0k
0
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0
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5.3k
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Comment: C: How to combine multiple tools to detct SVs in WES data
7.6 years ago by d-cameron ★ 3.0k
1
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0
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1.8k
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Comment: C: Do structural variations on pseudo-gene mean any thing?
7.6 years ago by d-cameron ★ 3.0k
1
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0
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1.8k
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Answer: A: Do structural variations on pseudo-gene mean any thing?
7.6 years ago by d-cameron ★ 3.0k
0
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0
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2.1k
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Comment: C: Why lack of SNPs within a window of 3.06 million bp (58887738 - 61949597) in chr
7.6 years ago by d-cameron ★ 3.0k
0
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1
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2.2k
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Comment: C: need java code implementation for the blastn steps to search for DNAseq, or java
7.6 years ago by d-cameron ★ 3.0k
1
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1
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2.6k
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Answer: A: How to check if a read in a SAM file contains substitutions
7.6 years ago by d-cameron ★ 3.0k
0
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1
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2.6k
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Comment: C: How to check if a read in a SAM file contains substitutions
7.6 years ago by d-cameron ★ 3.0k
1
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0
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2.1k
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Answer: A: What's the difference between half mapped reads and single paired reads?
7.6 years ago by d-cameron ★ 3.0k
0
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2
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5.3k
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Comment: C: How to combine multiple tools to detct SVs in WES data
7.6 years ago by d-cameron ★ 3.0k
1
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1
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2.9k
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Answer: A: Can Breakdancer be applied on Paired end Exome Sequencing data for germline copy
7.7 years ago by d-cameron ★ 3.0k
4
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0
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5.3k
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Answer: A: How to combine multiple tools to detct SVs in WES data
7.7 years ago by d-cameron ★ 3.0k
2
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0
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3.1k
views
Answer: A: Why does read with "read paired" flag not have mate in bam file?
7.7 years ago by d-cameron ★ 3.0k
0
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0
replies
3.2k
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Comment: C: What cigar to use to count reads with last base mismatch in Rsamtools?
7.7 years ago by d-cameron ★ 3.0k
0
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1
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2.3k
views
Answer: A: Basics about sequencing/alignment and variant calling
7.7 years ago by d-cameron ★ 3.0k
327 results • Page 4 of 7
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