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Comment: C: What cigar to use to count reads with last base mismatch in Rsamtools?
7.7 years ago by d-cameron ★ 3.0k
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1
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3.2k
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Answer: A: What cigar to use to count reads with last base mismatch in Rsamtools?
7.7 years ago by d-cameron ★ 3.0k
0
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1
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3.2k
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Comment: C: What cigar to use to count reads with last base mismatch in Rsamtools?
7.7 years ago by d-cameron ★ 3.0k
0
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1
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16k
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Comment: C: annotation of SV (structural variants)
7.7 years ago by d-cameron ★ 3.0k
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2
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16k
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Comment: C: annotation of SV (structural variants)
7.7 years ago by d-cameron ★ 3.0k
0
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1
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16k
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Comment: C: annotation of SV (structural variants)
7.7 years ago by d-cameron ★ 3.0k
0
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1
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16k
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Comment: C: annotation of SV (structural variants)
7.7 years ago by d-cameron ★ 3.0k
0
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2
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16k
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Comment: C: annotation of SV (structural variants)
7.7 years ago by d-cameron ★ 3.0k
1
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2
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16k
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Comment: C: annotation of SV (structural variants)
7.8 years ago by d-cameron ★ 3.0k
0
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1
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2.5k
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Comment: C: Research Consultation for a phD Dissertation
7.8 years ago by d-cameron ★ 3.0k
2
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2
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5.3k
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Comment: C: What kind of sequences I have, haploid or diploid?
7.8 years ago by d-cameron ★ 3.0k
1
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2
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16k
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Answer: A: annotation of SV (structural variants)
7.8 years ago by d-cameron ★ 3.0k
0
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0
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6.7k
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Comment: C: Fragment size and insert size
7.9 years ago by d-cameron ★ 3.0k
0
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1
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6.7k
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Comment: C: Fragment size and insert size
7.9 years ago by d-cameron ★ 3.0k
4
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2
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6.7k
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Answer: A: Fragment size and insert size
7.9 years ago by d-cameron ★ 3.0k
4
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0
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2.6k
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Answer: A: CNV detection using beakdancer and SVDetect
7.9 years ago by d-cameron ★ 3.0k
0
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0
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4.3k
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Comment: C: Can phasing or pre-phase during basecall cause indel?
7.9 years ago by d-cameron ★ 3.0k
1
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1
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4.3k
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Comment: C: Can phasing or pre-phase during basecall cause indel?
7.9 years ago by d-cameron ★ 3.0k
0
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0
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7.3k
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Comment: C: Best mapping software to generate BAM file
7.9 years ago by d-cameron ★ 3.0k
0
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1
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2.8k
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Comment: C: Simulation of single-end reads from reference genome
7.9 years ago by d-cameron ★ 3.0k
1
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0
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2.8k
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Comment: C: Simulation of single-end reads from reference genome
7.9 years ago by d-cameron ★ 3.0k
0
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0
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3.4k
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Answer: A: Fetch pairs of discordantly aligned reads
7.9 years ago by d-cameron ★ 3.0k
1
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1
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3.1k
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Answer: A: Strategies to call variants from a cancer sample
7.9 years ago by d-cameron ★ 3.0k
0
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0
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5.3k
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Comment: C: filter BAM file for reads that map 100% identity
7.9 years ago by d-cameron ★ 3.0k
2
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1
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7.9k
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Comment: C: Split BAM file.
7.9 years ago by d-cameron ★ 3.0k
1
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1
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10k
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Comment: C: Editing headers from a vcf.gz file
7.9 years ago by d-cameron ★ 3.0k
3
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1
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10k
views
Answer: Answer: Editing headers from a vcf.gz file
updated 2.6 years ago by 45k • written 7.9 years ago by ★ 3.0k
0
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0
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10k
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Comment: C: Editing headers from a vcf.gz file
7.9 years ago by d-cameron ★ 3.0k
0
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0
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4.0k
views
Comment: C: Help in writing NGS pipeline (or: the road from fasta to vcf)
8.0 years ago by d-cameron ★ 3.0k
0
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0
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1.8k
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Comment: C: finding variants in the low to no coverage areas of bacterial genomes
8.0 years ago by d-cameron ★ 3.0k
0
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1
reply
7.6k
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Comment: C: IGV does not show BAM file information
8.0 years ago by d-cameron ★ 3.0k
4
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2
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20k
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Answer: A: What does <*> mean in a vcf file?
8.0 years ago by d-cameron ★ 3.0k
0
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3
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1.8k
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Comment: C: finding variants in the low to no coverage areas of bacterial genomes
8.0 years ago by d-cameron ★ 3.0k
0
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1
reply
7.6k
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Answer: A: IGV does not show BAM file information
8.0 years ago by d-cameron ★ 3.0k
0
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1
reply
2.3k
views
Answer: A: Is there any read-mapping package that could map only the first half or the seco
8.1 years ago by d-cameron ★ 3.0k
3
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1
reply
5.5k
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Answer: A: MAPQ filtering for clinical applications
8.1 years ago by d-cameron ★ 3.0k
0
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1
reply
6.2k
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Answer: A: VIew reads sorted by name in IGV
8.1 years ago by d-cameron ★ 3.0k
0
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0
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8.4k
views
Comment: C: NGS data simulation: VarSim or BAMSurgeon?
8.1 years ago by d-cameron ★ 3.0k
0
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0
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2.4k
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Answer: A: How to retrieve hard clipped reads
8.2 years ago by d-cameron ★ 3.0k
1
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0
replies
5.3k
views
Answer: A: Structural Variant annotation
8.2 years ago by d-cameron ★ 3.0k
1
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0
replies
5.3k
views
Comment: C: Structural Variant annotation
8.2 years ago by d-cameron ★ 3.0k
1
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0
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5.3k
views
Comment: C: Structural Variant annotation
8.2 years ago by d-cameron ★ 3.0k
0
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2
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3.0k
views
What are the sematics of containing bwa split read alignments?
bwa SA split read
updated 8.2 years ago by 20 • written 8.6 years ago by ★ 3.0k
0
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1
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6.9k
views
Comment: C: How to extract only 5-prime hard/soft clipped reads?
8.2 years ago by d-cameron ★ 3.0k
1
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1
reply
6.9k
views
Comment: C: How to extract only 5-prime hard/soft clipped reads?
8.2 years ago by d-cameron ★ 3.0k
0
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1
reply
2.7k
views
Comment: C: Any good SV calling software for CtDNA?
8.2 years ago by d-cameron ★ 3.0k
0
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0
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6.3k
views
Answer: A: Access data from very big vcf files in R
8.2 years ago by d-cameron ★ 3.0k
3
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1
reply
2.7k
views
Answer: A: Any good SV calling software for CtDNA?
8.2 years ago by d-cameron ★ 3.0k
1
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0
replies
2.8k
views
Answer: A: Large reads data set which crosses 1TB size?
8.3 years ago by d-cameron ★ 3.0k
0
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1
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2.4k
views
Comment: C: Extract reads where both pairs maps properly and none of the pairs are split fro
8.3 years ago by d-cameron ★ 3.0k
327 results • Page 5 of 7
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