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Answer: Answer: no output from GATK CombineGVCFs
10 months ago by Vitis ★ 2.5k
1
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0
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2.4k
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Answer: Answer: Seurat sctransform - does anyone know of a good explanation for biologists?
2.5 years ago by Vitis ★ 2.5k
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0
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5.3k
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Answer: Answer: Biopython Seqio.Index() And Seqio.Index_Db() Very Slow For Large Sequence
2.5 years ago by Vitis ★ 2.5k
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0
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4.2k
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Answer: Answer: Y Chromosome Heterozygotes?
2.9 years ago by Vitis ★ 2.5k
1
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0
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21k
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Answer: A: how to visualize the bedgraph and bed file
updated 4.3 years ago by 43k • written 9.9 years ago by ★ 2.5k
3
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0
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3.6k
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Answer: A: Counting the number of paralogs in various species
updated 4.3 years ago by 43k • written 9.9 years ago by ★ 2.5k
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0
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1.9k
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Answer: A: Circos Plot for synteny file
4.3 years ago by Vitis ★ 2.5k
1
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0
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838
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Answer: A: How are haplotypes/heterozygosity resolved in sequence assembly?
4.3 years ago by Vitis ★ 2.5k
0
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0
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3.3k
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Answer: A: Using ensembl biomart retrieving orthologous codin sequence
updated 4.3 years ago by 43k • written 10.0 years ago by ★ 2.5k
1
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1
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2.7k
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Answer: A: Automatically Generating Robust Phylogenetic Trees
updated 4.3 years ago by 43k • written 10.0 years ago by ★ 2.5k
1
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1
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845
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Answer: A: A good tutorial for eukaryotic phylogeny?
4.4 years ago by Vitis ★ 2.5k
4
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0
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2.3k
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Answer: A: BWA Mem -M flag (mark split hits) effect on structural variation calling
4.5 years ago by Vitis ★ 2.5k
0
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0
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869
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Answer: A: Variant Annotation and prioritization
4.5 years ago by Vitis ★ 2.5k
1
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0
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2.0k
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Answer: A: Visualizations of chimeric connections in different chromosomes
4.5 years ago by Vitis ★ 2.5k
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0
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9.6k
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Answer: A: Insert Size For Each Bam Entry
updated 4.5 years ago by 43k • written 10.1 years ago by ★ 2.5k
1
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0
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926
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Answer: A: Different alleles or paralogs?
4.6 years ago by Vitis ★ 2.5k
7
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0
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7.1k
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Answer: A: Ka/Ks Ratio For Within A Gene - Very Confused !!
updated 4.6 years ago by 43k • written 12.6 years ago by ★ 2.5k
1
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0
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7.1k
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Answer: A: Local Graphic View Of Blast Results
updated 4.6 years ago by 43k • written 12.6 years ago by ★ 2.5k
2
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0
replies
2.5k
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Answer: A: How to replicate vcftool's sliding window SNP density?
4.6 years ago by Vitis ★ 2.5k
0
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0
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978
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Answer: A: Efficiently run blat for long sequences
4.6 years ago by Vitis ★ 2.5k
1
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0
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17k
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Answer: A: Can I Access Bam File Information Without Converting To Sam?
updated 4.6 years ago by 43k • written 12.7 years ago by ★ 2.5k
2
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0
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3.6k
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Answer: A: Shotgun metagenomics high duplication read rate - how high is too high?
4.6 years ago by Vitis ★ 2.5k
1
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0
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7.0k
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Answer: A: Dump Upstream Sequence
updated 4.7 years ago by 43k • written 12.6 years ago by ★ 2.5k
0
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0
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2.6k
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Answer: A: ref and alt allele count from BAM file
4.8 years ago by Vitis ★ 2.5k
4
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1
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2.0k
views
Answer: A: trouble with bedtools intersect and coverage
4.9 years ago by Vitis ★ 2.5k
0
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0
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1.5k
views
Answer: A: SNP calling with de novo assembly
4.9 years ago by Vitis ★ 2.5k
0
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0
replies
1.8k
views
Answer: A: Improve illumina short read assembly using PacBio long reads
4.9 years ago by Vitis ★ 2.5k
3
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1
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2.0k
views
Answer: A: Haplotype frequency calculation from .vcf files
5.0 years ago by Vitis ★ 2.5k
1
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1
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2.1k
views
Answer: A: hom/het definition from Allelic Depth counts
5.0 years ago by Vitis ★ 2.5k
2
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0
replies
2.9k
views
Answer: A: Assembly and consensus tools for Nanopore reads from amplicons
5.1 years ago by Vitis ★ 2.5k
0
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0
replies
1.2k
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Answer: A: Program for Amplicon (MHC) Analysis?
5.1 years ago by Vitis ★ 2.5k
0
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0
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15k
views
Answer: A: How To Generate A "Lollipop" Image To Display Mutations Along A Sequence
5.1 years ago by Vitis ★ 2.5k
1
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1
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1.1k
views
Answer: A: Compara API of Ensembl
5.1 years ago by Vitis ★ 2.5k
1
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1
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1.3k
views
Answer: A: Obtain sequence of a gene with vector DNA integrated
5.1 years ago by Vitis ★ 2.5k
1
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1
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1.3k
views
Answer: A: How to evaluate one specie lost or gain the chloroplast in the evolutionary proc
5.1 years ago by Vitis ★ 2.5k
1
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0
replies
8.7k
views
Answer: A: Calculate population allele frequencies from a vcf file including multiple popul
5.2 years ago by Vitis ★ 2.5k
1
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0
replies
1.4k
views
Answer: A: data assembling and analysis for polyploid plant
5.2 years ago by Vitis ★ 2.5k
0
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0
replies
1.6k
views
Answer: A: Algorithms for identification of insertion sites using split reads
5.2 years ago by Vitis ★ 2.5k
1
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0
replies
1.8k
views
Answer: A: Annovar annotation for plants
5.2 years ago by Vitis ★ 2.5k
0
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1
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1.0k
views
Answer: A: can delly identify multiple copies of a unique deletion?
5.2 years ago by Vitis ★ 2.5k
1
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1
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1.2k
views
Answer: A: Get the divergence between two species with a ref genome and reads
5.2 years ago by Vitis ★ 2.5k
1
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1
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936
views
Answer: A: identify genomic positions susceptible to alignment artifacts with bwa-mem align
5.2 years ago by Vitis ★ 2.5k
4
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1
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1.1k
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Answer: A: Selecting pedigree informative SNPs
5.3 years ago by Vitis ★ 2.5k
2
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1
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14k
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Answer: A: snpEff building new database ERROR
5.3 years ago by Vitis ★ 2.5k
0
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1
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2.9k
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Answer: A: samtools sort truncated
5.3 years ago by Vitis ★ 2.5k
2
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0
replies
14k
views
Answer: A: snpEff building new database ERROR
5.3 years ago by Vitis ★ 2.5k
0
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1
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4.4k
views
Answer: A: Filtering sam/bam by using CIGAR deletion sites
5.3 years ago by Vitis ★ 2.5k
1
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1
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1.4k
views
Answer: A: How to identify translocation events within cell lines
5.3 years ago by Vitis ★ 2.5k
0
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0
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1.4k
views
Answer: A: Alternative to mummerplot
5.3 years ago by Vitis ★ 2.5k
0
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1
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5.1k
views
Answer: A: Identification of the sequence insertion site in the genome
5.3 years ago by Vitis ★ 2.5k
140 results • Page 1 of 3
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