Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : answers
0
votes
1
reply
1.6k
views
Answer: Answer: no output from GATK CombineGVCFs
20 months ago by Vitis ★ 2.6k
1
vote
0
replies
3.6k
views
Answer: Answer: Seurat sctransform - does anyone know of a good explanation for biologists?
3.2 years ago by Vitis ★ 2.6k
0
votes
0
replies
5.6k
views
Answer: Answer: Biopython Seqio.Index() And Seqio.Index_Db() Very Slow For Large Sequence
3.3 years ago by Vitis ★ 2.6k
0
votes
0
replies
4.5k
views
Answer: Answer: Y Chromosome Heterozygotes?
3.7 years ago by Vitis ★ 2.6k
1
vote
0
replies
23k
views
Answer: A: how to visualize the bedgraph and bed file
updated 5.1 years ago by 44k • written 10.7 years ago by ★ 2.6k
3
votes
0
replies
3.9k
views
Answer: A: Counting the number of paralogs in various species
updated 5.1 years ago by 44k • written 10.7 years ago by ★ 2.6k
0
votes
0
replies
2.1k
views
Answer: A: Circos Plot for synteny file
5.1 years ago by Vitis ★ 2.6k
1
vote
0
replies
960
views
Answer: A: How are haplotypes/heterozygosity resolved in sequence assembly?
5.1 years ago by Vitis ★ 2.6k
0
votes
0
replies
3.5k
views
Answer: A: Using ensembl biomart retrieving orthologous codin sequence
updated 5.1 years ago by 44k • written 10.8 years ago by ★ 2.6k
1
vote
1
reply
3.0k
views
Answer: A: Automatically Generating Robust Phylogenetic Trees
updated 5.1 years ago by 44k • written 10.8 years ago by ★ 2.6k
1
vote
1
reply
962
views
Answer: A: A good tutorial for eukaryotic phylogeny?
5.1 years ago by Vitis ★ 2.6k
4
votes
0
replies
2.8k
views
Answer: A: BWA Mem -M flag (mark split hits) effect on structural variation calling
5.2 years ago by Vitis ★ 2.6k
0
votes
0
replies
983
views
Answer: A: Variant Annotation and prioritization
5.3 years ago by Vitis ★ 2.6k
1
vote
0
replies
2.4k
views
Answer: A: Visualizations of chimeric connections in different chromosomes
5.3 years ago by Vitis ★ 2.6k
0
votes
0
replies
10k
views
Answer: A: Insert Size For Each Bam Entry
updated 5.3 years ago by 44k • written 10.9 years ago by ★ 2.6k
1
vote
0
replies
1.0k
views
Answer: A: Different alleles or paralogs?
5.4 years ago by Vitis ★ 2.6k
7
votes
0
replies
7.5k
views
Answer: A: Ka/Ks Ratio For Within A Gene - Very Confused !!
updated 5.4 years ago by 44k • written 13.4 years ago by ★ 2.6k
1
vote
0
replies
7.6k
views
Answer: A: Local Graphic View Of Blast Results
updated 5.4 years ago by 44k • written 13.4 years ago by ★ 2.6k
2
votes
0
replies
2.8k
views
Answer: A: How to replicate vcftool's sliding window SNP density?
5.4 years ago by Vitis ★ 2.6k
0
votes
0
replies
1.2k
views
Answer: A: Efficiently run blat for long sequences
5.4 years ago by Vitis ★ 2.6k
1
vote
0
replies
19k
views
Answer: A: Can I Access Bam File Information Without Converting To Sam?
updated 5.4 years ago by 44k • written 13.5 years ago by ★ 2.6k
2
votes
0
replies
4.5k
views
Answer: A: Shotgun metagenomics high duplication read rate - how high is too high?
5.4 years ago by Vitis ★ 2.6k
1
vote
0
replies
7.4k
views
Answer: A: Dump Upstream Sequence
updated 5.5 years ago by 44k • written 13.4 years ago by ★ 2.6k
0
votes
0
replies
2.8k
views
Answer: A: ref and alt allele count from BAM file
5.6 years ago by Vitis ★ 2.6k
4
votes
1
reply
2.7k
views
Answer: A: trouble with bedtools intersect and coverage
5.7 years ago by Vitis ★ 2.6k
0
votes
0
replies
1.7k
views
Answer: A: SNP calling with de novo assembly
5.7 years ago by Vitis ★ 2.6k
0
votes
0
replies
2.2k
views
Answer: A: Improve illumina short read assembly using PacBio long reads
5.7 years ago by Vitis ★ 2.6k
3
votes
1
reply
2.3k
views
Answer: A: Haplotype frequency calculation from .vcf files
5.8 years ago by Vitis ★ 2.6k
1
vote
1
reply
2.5k
views
Answer: A: hom/het definition from Allelic Depth counts
5.8 years ago by Vitis ★ 2.6k
2
votes
0
replies
3.3k
views
Answer: A: Assembly and consensus tools for Nanopore reads from amplicons
5.9 years ago by Vitis ★ 2.6k
0
votes
0
replies
1.4k
views
Answer: A: Program for Amplicon (MHC) Analysis?
5.9 years ago by Vitis ★ 2.6k
0
votes
0
replies
16k
views
Answer: A: How To Generate A "Lollipop" Image To Display Mutations Along A Sequence
5.9 years ago by Vitis ★ 2.6k
1
vote
1
reply
1.3k
views
Answer: A: Compara API of Ensembl
5.9 years ago by Vitis ★ 2.6k
1
vote
1
reply
1.6k
views
Answer: A: Obtain sequence of a gene with vector DNA integrated
5.9 years ago by Vitis ★ 2.6k
1
vote
1
reply
1.6k
views
Answer: A: How to evaluate one specie lost or gain the chloroplast in the evolutionary proc
5.9 years ago by Vitis ★ 2.6k
1
vote
0
replies
9.6k
views
Answer: A: Calculate population allele frequencies from a vcf file including multiple popul
6.0 years ago by Vitis ★ 2.6k
1
vote
0
replies
1.7k
views
Answer: A: data assembling and analysis for polyploid plant
6.0 years ago by Vitis ★ 2.6k
0
votes
0
replies
1.8k
views
Answer: A: Algorithms for identification of insertion sites using split reads
6.0 years ago by Vitis ★ 2.6k
1
vote
0
replies
2.1k
views
Answer: A: Annovar annotation for plants
6.0 years ago by Vitis ★ 2.6k
0
votes
1
reply
1.2k
views
Answer: A: can delly identify multiple copies of a unique deletion?
6.0 years ago by Vitis ★ 2.6k
1
vote
1
reply
1.5k
views
Answer: A: Get the divergence between two species with a ref genome and reads
6.0 years ago by Vitis ★ 2.6k
1
vote
1
reply
1.1k
views
Answer: A: identify genomic positions susceptible to alignment artifacts with bwa-mem align
6.0 years ago by Vitis ★ 2.6k
4
votes
1
reply
1.2k
views
Answer: A: Selecting pedigree informative SNPs
6.0 years ago by Vitis ★ 2.6k
3
votes
1
reply
15k
views
Answer: A: snpEff building new database ERROR
6.1 years ago by Vitis ★ 2.6k
0
votes
1
reply
3.2k
views
Answer: A: samtools sort truncated
6.1 years ago by Vitis ★ 2.6k
2
votes
0
replies
15k
views
Answer: A: snpEff building new database ERROR
6.1 years ago by Vitis ★ 2.6k
0
votes
1
reply
5.0k
views
Answer: A: Filtering sam/bam by using CIGAR deletion sites
6.1 years ago by Vitis ★ 2.6k
1
vote
1
reply
1.6k
views
Answer: A: How to identify translocation events within cell lines
6.1 years ago by Vitis ★ 2.6k
0
votes
0
replies
1.6k
views
Answer: A: Alternative to mummerplot
6.1 years ago by Vitis ★ 2.6k
0
votes
1
reply
6.4k
views
Answer: A: Identification of the sequence insertion site in the genome
6.1 years ago by Vitis ★ 2.6k
140 results • Page 1 of 3
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6