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934
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Comment: Comment: PROVEAN input for stop codon
16 months ago by Vitis ★ 2.6k
0
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2
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934
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PROVEAN input for stop codon
variant PROVEAN
16 months ago by Vitis ★ 2.6k
0
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0
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517
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Polyphen-2 for non-human organisms
polyphen-2
17 months ago by Vitis ★ 2.6k
0
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1
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2.3k
views
Answer: Answer: no output from GATK CombineGVCFs
2.4 years ago by Vitis ★ 2.6k
1
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0
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5.1k
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Answer: Answer: Seurat sctransform - does anyone know of a good explanation for biologists?
4.0 years ago by Vitis ★ 2.6k
0
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0
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6.1k
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Answer: Answer: Biopython Seqio.Index() And Seqio.Index_Db() Very Slow For Large Sequence
4.0 years ago by Vitis ★ 2.6k
0
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0
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4.9k
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Answer: Answer: Y Chromosome Heterozygotes?
4.5 years ago by Vitis ★ 2.6k
0
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1
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7.3k
views
Comment: C: Gene expression heatmap following pseudotime analysis
4.7 years ago by Vitis ★ 2.6k
3
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7
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7.3k
views
Gene expression heatmap following pseudotime analysis
RNA-Seq
updated 4.7 years ago by 13k • written 4.7 years ago by ★ 2.6k
1
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0
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7.3k
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Comment: C: Gene expression heatmap following pseudotime analysis
4.7 years ago by Vitis ★ 2.6k
0
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0
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7.3k
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Comment: C: Gene expression heatmap following pseudotime analysis
4.7 years ago by Vitis ★ 2.6k
1
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1
reply
4.2k
views
Comment: C: GATK GenomicsDBImport intervals
5.4 years ago by Vitis ★ 2.6k
3
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3
replies
1.4k
views
Analysis of host-parasite mixed transcriptome
RNA-Seq alignment
updated 5.4 years ago by 154k • written 5.4 years ago by ★ 2.6k
0
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0
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1.4k
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Comment: C: Analysis of host-parasite mixed transcriptome
5.4 years ago by Vitis ★ 2.6k
1
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0
replies
1.1k
views
Variant calling from short/long read hybrid BAM
SNP sequencing
5.6 years ago by Vitis ★ 2.6k
1
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0
replies
24k
views
Answer: A: how to visualize the bedgraph and bed file
updated 5.8 years ago by 45k • written 11.4 years ago by ★ 2.6k
3
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0
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4.5k
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Answer: A: Counting the number of paralogs in various species
updated 5.8 years ago by 45k • written 11.4 years ago by ★ 2.6k
0
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0
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2.4k
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Answer: A: Circos Plot for synteny file
5.8 years ago by Vitis ★ 2.6k
1
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0
replies
1.2k
views
Answer: A: How are haplotypes/heterozygosity resolved in sequence assembly?
5.8 years ago by Vitis ★ 2.6k
0
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0
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3.9k
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Answer: A: Using ensembl biomart retrieving orthologous codin sequence
updated 5.8 years ago by 45k • written 11.5 years ago by ★ 2.6k
0
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0
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3.6k
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Comment: C: Automatically Generating Robust Phylogenetic Trees
updated 5.9 years ago by 45k • written 11.5 years ago by ★ 2.6k
0
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1
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3.6k
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Comment: C: Automatically Generating Robust Phylogenetic Trees
updated 5.9 years ago by 45k • written 11.5 years ago by ★ 2.6k
1
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1
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3.6k
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Answer: A: Automatically Generating Robust Phylogenetic Trees
updated 5.9 years ago by 45k • written 11.5 years ago by ★ 2.6k
1
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1
reply
1.2k
views
Answer: A: A good tutorial for eukaryotic phylogeny?
5.9 years ago by Vitis ★ 2.6k
0
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0
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3.4k
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Comment: C: Detecting Derived Sites
updated 5.9 years ago by 45k • written 14.2 years ago by ★ 2.6k
4
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0
replies
3.2k
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Answer: A: BWA Mem -M flag (mark split hits) effect on structural variation calling
6.0 years ago by Vitis ★ 2.6k
0
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0
replies
1.2k
views
Answer: A: Variant Annotation and prioritization
6.0 years ago by Vitis ★ 2.6k
0
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0
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1.9k
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Comment: C: Mutant Transcript is higher than the WT. What may be the reason?
6.0 years ago by Vitis ★ 2.6k
0
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1
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2.9k
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Comment: C: snpEff build not working with gff3
6.0 years ago by Vitis ★ 2.6k
1
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0
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3.0k
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Answer: A: Visualizations of chimeric connections in different chromosomes
6.0 years ago by Vitis ★ 2.6k
1
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1
reply
1.9k
views
Comment: C: Mutant Transcript is higher than the WT. What may be the reason?
6.0 years ago by Vitis ★ 2.6k
1
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0
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3.5k
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Comment: C: What is in your opinion the current state-of-the-art sequencing platform for gen
6.0 years ago by Vitis ★ 2.6k
0
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0
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11k
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Answer: A: Insert Size For Each Bam Entry
updated 6.1 years ago by 45k • written 11.6 years ago by ★ 2.6k
1
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0
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1.3k
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Answer: A: Different alleles or paralogs?
6.1 years ago by Vitis ★ 2.6k
0
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0
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2.6k
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Comment: C: GATK JointDiscovery Error - Java Heap Space?
6.1 years ago by Vitis ★ 2.6k
0
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1
reply
2.6k
views
Comment: C: GATK JointDiscovery Error - Java Heap Space?
6.1 years ago by Vitis ★ 2.6k
0
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1
reply
2.6k
views
Comment: C: GATK JointDiscovery Error - Java Heap Space?
6.1 years ago by Vitis ★ 2.6k
7
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0
replies
8.2k
views
Answer: A: Ka/Ks Ratio For Within A Gene - Very Confused !!
updated 6.1 years ago by 45k • written 14.1 years ago by ★ 2.6k
0
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1
reply
2.3k
views
Comment: C: Question about generate a mappability mask file for non-human species
6.1 years ago by Vitis ★ 2.6k
1
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0
replies
8.1k
views
Answer: A: Local Graphic View Of Blast Results
updated 6.1 years ago by 45k • written 14.2 years ago by ★ 2.6k
2
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0
replies
3.2k
views
Answer: A: How to replicate vcftool's sliding window SNP density?
6.1 years ago by Vitis ★ 2.6k
0
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0
replies
1.5k
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Answer: A: Efficiently run blat for long sequences
6.1 years ago by Vitis ★ 2.6k
0
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1
reply
2.3k
views
Comment: C: Question about generate a mappability mask file for non-human species
6.1 years ago by Vitis ★ 2.6k
1
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0
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21k
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Answer: A: Can I Access Bam File Information Without Converting To Sam?
updated 6.1 years ago by 45k • written 14.2 years ago by ★ 2.6k
2
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0
replies
5.5k
views
Answer: A: Shotgun metagenomics high duplication read rate - how high is too high?
6.1 years ago by Vitis ★ 2.6k
1
vote
0
replies
8.3k
views
Answer: A: Dump Upstream Sequence
updated 6.2 years ago by 45k • written 14.1 years ago by ★ 2.6k
10
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7
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4.9k
views
Housekeeping Gene Identifications
gene microarray meta
updated 6.3 years ago by ▴ 40 • written 14.1 years ago by ★ 2.6k
0
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0
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1.5k
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Comment: C: Read Count Differences in Amplicon Sequencing
6.3 years ago by Vitis ★ 2.6k
0
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0
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3.2k
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Answer: A: ref and alt allele count from BAM file
6.4 years ago by Vitis ★ 2.6k
0
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1
reply
6.2k
views
Comment: C: Read-based phasing with WhatsHap
6.4 years ago by Vitis ★ 2.6k
339 results • Page 1 of 7
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