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1.5k
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Answer: Answer: Seurat sctransform - does anyone know of a good explanation for biologists?
19 months ago by Vitis ★ 2.5k
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0
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4.7k
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Answer: Answer: Biopython Seqio.Index() And Seqio.Index_Db() Very Slow For Large Sequence
19 months ago by Vitis ★ 2.5k
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0
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4.0k
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Answer: Answer: Y Chromosome Heterozygotes?
2.0 years ago by Vitis ★ 2.5k
0
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1
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3.5k
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Comment: C: Gene expression heatmap following pseudotime analysis
2.3 years ago by Vitis ★ 2.5k
3
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7
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3.5k
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Gene expression heatmap following pseudotime analysis
RNA-Seq
updated 2.3 years ago by 12k • written 2.3 years ago by ★ 2.5k
1
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0
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3.5k
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Comment: C: Gene expression heatmap following pseudotime analysis
2.3 years ago by Vitis ★ 2.5k
0
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0
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3.5k
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Comment: C: Gene expression heatmap following pseudotime analysis
2.3 years ago by Vitis ★ 2.5k
1
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1
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3.0k
views
Comment: C: GATK GenomicsDBImport intervals
3.0 years ago by Vitis ★ 2.5k
3
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3
replies
636
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Analysis of host-parasite mixed transcriptome
RNA-Seq alignment
updated 3.0 years ago by 130k • written 3.0 years ago by ★ 2.5k
0
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0
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636
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Comment: C: Analysis of host-parasite mixed transcriptome
3.0 years ago by Vitis ★ 2.5k
1
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0
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687
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Variant calling from short/long read hybrid BAM
SNP sequencing
3.2 years ago by Vitis ★ 2.5k
1
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0
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19k
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Answer: A: how to visualize the bedgraph and bed file
updated 3.4 years ago by 39k • written 9.0 years ago by ★ 2.5k
3
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0
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3.3k
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Answer: A: Counting the number of paralogs in various species
updated 3.4 years ago by 39k • written 9.0 years ago by ★ 2.5k
0
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0
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1.6k
views
Answer: A: Circos Plot for synteny file
3.4 years ago by Vitis ★ 2.5k
1
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0
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672
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Answer: A: How are haplotypes/heterozygosity resolved in sequence assembly?
3.4 years ago by Vitis ★ 2.5k
0
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0
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3.1k
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Answer: A: Using ensembl biomart retrieving orthologous codin sequence
updated 3.4 years ago by 39k • written 9.1 years ago by ★ 2.5k
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0
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2.5k
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Comment: C: Automatically Generating Robust Phylogenetic Trees
updated 3.5 years ago by 39k • written 9.1 years ago by ★ 2.5k
0
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1
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2.5k
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Comment: C: Automatically Generating Robust Phylogenetic Trees
updated 3.5 years ago by 39k • written 9.1 years ago by ★ 2.5k
1
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1
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2.5k
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Answer: A: Automatically Generating Robust Phylogenetic Trees
updated 3.5 years ago by 39k • written 9.1 years ago by ★ 2.5k
1
vote
1
reply
685
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Answer: A: A good tutorial for eukaryotic phylogeny?
3.5 years ago by Vitis ★ 2.5k
0
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0
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2.4k
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Comment: C: Detecting Derived Sites
updated 3.5 years ago by 39k • written 11.8 years ago by ★ 2.5k
4
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0
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2.0k
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Answer: A: BWA Mem -M flag (mark split hits) effect on structural variation calling
3.6 years ago by Vitis ★ 2.5k
0
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0
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713
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Answer: A: Variant Annotation and prioritization
3.6 years ago by Vitis ★ 2.5k
0
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0
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959
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Comment: C: Mutant Transcript is higher than the WT. What may be the reason?
3.6 years ago by Vitis ★ 2.5k
0
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1
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1.9k
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Comment: C: snpEff build not working with gff3
3.6 years ago by Vitis ★ 2.5k
1
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0
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1.5k
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Answer: A: Visualizations of chimeric connections in different chromosomes
3.6 years ago by Vitis ★ 2.5k
1
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1
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959
views
Comment: C: Mutant Transcript is higher than the WT. What may be the reason?
3.6 years ago by Vitis ★ 2.5k
1
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0
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1.6k
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Comment: C: What is in your opinion the current state-of-the-art sequencing platform for gen
3.6 years ago by Vitis ★ 2.5k
0
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0
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8.7k
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Answer: A: Insert Size For Each Bam Entry
updated 3.7 years ago by 39k • written 9.2 years ago by ★ 2.5k
1
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0
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747
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Answer: A: Different alleles or paralogs?
3.7 years ago by Vitis ★ 2.5k
0
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0
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1.6k
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Comment: C: GATK JointDiscovery Error - Java Heap Space?
3.7 years ago by Vitis ★ 2.5k
0
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1
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1.6k
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Comment: C: GATK JointDiscovery Error - Java Heap Space?
3.7 years ago by Vitis ★ 2.5k
0
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1
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1.6k
views
Comment: C: GATK JointDiscovery Error - Java Heap Space?
3.7 years ago by Vitis ★ 2.5k
7
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0
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6.7k
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Answer: A: Ka/Ks Ratio For Within A Gene - Very Confused !!
updated 3.7 years ago by 39k • written 11.7 years ago by ★ 2.5k
0
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1
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1.3k
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Comment: C: Question about generate a mappability mask file for non-human species
3.7 years ago by Vitis ★ 2.5k
1
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0
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6.7k
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Answer: A: Local Graphic View Of Blast Results
updated 3.7 years ago by 39k • written 11.8 years ago by ★ 2.5k
2
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0
replies
2.1k
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Answer: A: How to replicate vcftool's sliding window SNP density?
3.7 years ago by Vitis ★ 2.5k
0
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0
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774
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Answer: A: Efficiently run blat for long sequences
3.7 years ago by Vitis ★ 2.5k
0
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1
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1.3k
views
Comment: C: Question about generate a mappability mask file for non-human species
3.7 years ago by Vitis ★ 2.5k
1
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0
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14k
views
Answer: A: Can I Access Bam File Information Without Converting To Sam?
updated 3.7 years ago by 39k • written 11.8 years ago by ★ 2.5k
2
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0
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2.8k
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Answer: A: Shotgun metagenomics high duplication read rate - how high is too high?
3.7 years ago by Vitis ★ 2.5k
1
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0
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6.6k
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Answer: A: Dump Upstream Sequence
updated 3.8 years ago by 39k • written 11.7 years ago by ★ 2.5k
10
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7
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4.0k
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Housekeeping Gene Identifications
gene microarray meta
updated 3.9 years ago by ▴ 40 • written 11.7 years ago by ★ 2.5k
0
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0
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972
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Comment: C: Read Count Differences in Amplicon Sequencing
3.9 years ago by Vitis ★ 2.5k
0
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0
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2.3k
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Answer: A: ref and alt allele count from BAM file
3.9 years ago by Vitis ★ 2.5k
0
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1
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4.1k
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Comment: C: Read-based phasing with WhatsHap
4.0 years ago by Vitis ★ 2.5k
2
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0
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5.4k
views
Comment: C: How to do data cleaning for VCF genetic file
4.0 years ago by Vitis ★ 2.5k
4
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1
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1.7k
views
Answer: A: trouble with bedtools intersect and coverage
4.0 years ago by Vitis ★ 2.5k
1
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0
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1.4k
views
Comment: C: JBrowse help with opening a Gff gene model file
4.0 years ago by Vitis ★ 2.5k
1
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1
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1.4k
views
Comment: C: JBrowse help with opening a Gff gene model file
4.0 years ago by Vitis ★ 2.5k
335 results • Page 1 of 7
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