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1.0k
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Answer: A: ucsc genome browser variants read
6.0 years ago by H.Hasani ★ 1.0k
1
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0
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2.7k
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Comment: C: Clustering DNA sequences
6.0 years ago by H.Hasani ★ 1.0k
0
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1
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22k
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Comment: C: Add annotation color bar to ggplot objects
6.0 years ago by H.Hasani ★ 1.0k
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1.7k
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Answer: A: How to calculate allele counts(Ref and alt) using a target bed file and aligned
6.2 years ago by H.Hasani ★ 1.0k
0
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1
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5.6k
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Comment: C: plotting problem with loop in R
6.2 years ago by H.Hasani ★ 1.0k
1
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1
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5.6k
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Comment: C: plotting problem with loop in R
6.2 years ago by H.Hasani ★ 1.0k
1
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1
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5.6k
views
Comment: C: plotting problem with loop in R
6.2 years ago by H.Hasani ★ 1.0k
1
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1
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5.6k
views
Comment: C: plotting problem with loop in R
6.2 years ago by H.Hasani ★ 1.0k
0
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1
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2.0k
views
Answer: A: Barplot with base point as 0.5
6.2 years ago by H.Hasani ★ 1.0k
0
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1
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5.6k
views
Comment: C: plotting problem with loop in R
6.2 years ago by H.Hasani ★ 1.0k
1
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1
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3.8k
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Comment: C: Recovering bam files after unknow deletion in the storage
6.3 years ago by H.Hasani ★ 1.0k
0
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0
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1.3k
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Answer: A: Mutated gene based pathway enrichment
6.3 years ago by H.Hasani ★ 1.0k
1
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0
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17k
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Comment: C: How to run several one-way ANOVAs in R using on different categories?
6.3 years ago by H.Hasani ★ 1.0k
3
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0
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2.5k
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Answer: A: Getting this specific information from gene- annotation enrichment analysis
6.3 years ago by H.Hasani ★ 1.0k
3
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0
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2.9k
views
Answer: A: venndiagram `Error in draw.quintuple.venn`?
6.5 years ago by H.Hasani ★ 1.0k
1
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0
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5.5k
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Comment: C: Create snakefile based on R script
6.7 years ago by H.Hasani ★ 1.0k
2
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0
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3.4k
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Answer: A: Lolliplot graph for mutations
6.8 years ago by H.Hasani ★ 1.0k
0
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0
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9.0k
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Answer: A: download tumor and normal data from TCGA
6.8 years ago by H.Hasani ★ 1.0k
0
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0
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828
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How to get AF in TCGA MutSigNozzleReport2CV Level_4
SNP tcga alele fraction
6.8 years ago by H.Hasani ★ 1.0k
2
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1
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4.0k
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Answer: A: Bioinformatics terms that might be confusing for beginners
7.0 years ago by H.Hasani ★ 1.0k
0
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0
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5.6k
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Comment: C: Interpretation of TCGA CNV data
7.1 years ago by H.Hasani ★ 1.0k
1
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5.3k
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Comment: C: The outputs of GISTIC
7.1 years ago by H.Hasani ★ 1.0k
0
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0
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5.3k
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Comment: C: error for barplot in enrichGO(clusterProfiler)
7.2 years ago by H.Hasani ★ 1.0k
0
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1
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10k
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Comment: C: Genotyping, genotype calling or SNP calling?
7.2 years ago by H.Hasani ★ 1.0k
2
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2
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4.2k
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TCGA raw data (Level 1)
RNA-Seq SNP copy number
7.2 years ago by H.Hasani ★ 1.0k
4
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5
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12k
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Bowtie2 error with single end mapping
ChIP-Seq single-end read mapping
updated 7.3 years ago by ▴ 80 • written 8.5 years ago by ★ 1.0k
0
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0
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3.0k
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Comment: C: Detection of SNPs
7.3 years ago by H.Hasani ★ 1.0k
0
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1
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3.0k
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Answer: A: Detection of SNPs
7.3 years ago by H.Hasani ★ 1.0k
0
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0
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8.0k
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Comment: C: use firehose_get to download TCGA data
7.3 years ago by H.Hasani ★ 1.0k
0
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1
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8.0k
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Comment: C: use firehose_get to download TCGA data
7.3 years ago by H.Hasani ★ 1.0k
0
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0
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2.0k
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Comment: C: COSMIC paired normal cell lines for somatic mutation calling
7.8 years ago by H.Hasani ★ 1.0k
0
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0
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49k
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Answer: A: In simple words - what is k-mer??
7.8 years ago by H.Hasani ★ 1.0k
2
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3
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3.4k
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How to Specify Genome Build in MutSigCV Input ?
gene Assembly SNP genome
updated 3.1 years ago by 45k • written 9.8 years ago by ★ 1.0k
0
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1
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2.5k
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Comment: C: Recognizing an organism which is combination of other organisms
8.2 years ago by H.Hasani ★ 1.0k
0
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0
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7.1k
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Comment: C: samtools view region
8.2 years ago by H.Hasani ★ 1.0k
1
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0
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1.9k
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Answer: A: functional variant discovery after GATK variant calling
8.2 years ago by H.Hasani ★ 1.0k
0
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1
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7.1k
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Comment: C: samtools view region
8.2 years ago by H.Hasani ★ 1.0k
0
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1
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3.3k
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Comment: C: TCGA raw counts DexSeq
8.2 years ago by H.Hasani ★ 1.0k
0
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1
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7.1k
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Comment: C: samtools view region
8.2 years ago by H.Hasani ★ 1.0k
0
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0
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2.2k
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Answer: A: Broad rules of thumb on # of variations
8.2 years ago by H.Hasani ★ 1.0k
1
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1
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7.1k
views
Answer: A: samtools view region
8.2 years ago by H.Hasani ★ 1.0k
1
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1
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3.3k
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Answer: A: TCGA raw counts DexSeq
8.2 years ago by H.Hasani ★ 1.0k
0
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0
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12k
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Comment: C: GEO datasets: Raw data is available on Series record
8.3 years ago by H.Hasani ★ 1.0k
0
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1
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12k
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Comment: C: GEO datasets: Raw data is available on Series record
8.3 years ago by H.Hasani ★ 1.0k
0
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2
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4.2k
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Comment: C: Interpreting unusual-looking mean-variance plot from EdgeR
8.3 years ago by H.Hasani ★ 1.0k
0
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0
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4.6k
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Comment: C: clusterProfiler (KEGG Enrichment Analysis) error
8.4 years ago by H.Hasani ★ 1.0k
1
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0
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12k
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Comment: C: Bowtie2 error with single end mapping
8.5 years ago by H.Hasani ★ 1.0k
3
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1
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2.0k
views
Comment: C: How to predict mutation without using variant callers like GATK, Mutect?
8.5 years ago by H.Hasani ★ 1.0k
0
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0
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1.4k
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Comment: C: variant filtration criteria
8.5 years ago by H.Hasani ★ 1.0k
1
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1
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29k
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Comment: C: Duplicated Reads In Rna-Seq Experiment
8.5 years ago by H.Hasani ★ 1.0k
198 results • Page 2 of 4
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