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2
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0
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4.5k
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Comment: C: eCLIP peak calling
7.0 years ago by Eric Lim ★ 2.2k
0
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0
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4.6k
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Comment: C: -bash: ./HeatMap.R: cannot execute binary file. Why is this?
7.0 years ago by Eric Lim ★ 2.2k
1
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1
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1.7k
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Comment: C: need code for sorting fasta header
7.0 years ago by Eric Lim ★ 2.2k
0
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1
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4.6k
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Comment: C: -bash: ./HeatMap.R: cannot execute binary file. Why is this?
7.0 years ago by Eric Lim ★ 2.2k
0
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2
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4.6k
views
Comment: C: -bash: ./HeatMap.R: cannot execute binary file. Why is this?
7.0 years ago by Eric Lim ★ 2.2k
0
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0
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2.6k
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Comment: C: 5', 3' SS and Intron retention read count using STAR out.tab
7.0 years ago by Eric Lim ★ 2.2k
0
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0
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2.4k
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Comment: C: Conda on MacOS
7.1 years ago by Eric Lim ★ 2.2k
3
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1
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2.6k
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Comment: C: 5', 3' ASS and Intron retention read count using STAR out.tab
7.1 years ago by Eric Lim ★ 2.2k
1
vote
1
reply
3.8k
views
Comment: C: Can snakemake work with multiple nodes from HPC?
7.1 years ago by Eric Lim ★ 2.2k
1
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1
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3.8k
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Comment: C: Can snakemake work with multiple nodes from HPC?
7.1 years ago by Eric Lim ★ 2.2k
1
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1
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3.8k
views
Comment: C: Can snakemake work with multiple nodes from HPC?
7.1 years ago by Eric Lim ★ 2.2k
0
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0
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1.2k
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Comment: C: How/where to obtain a bigwig or bedgraph of unmappable genome regions?
7.1 years ago by Eric Lim ★ 2.2k
1
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0
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7.6k
views
Answer: A: How to write the output in snakefile (snakemake) for bowtie2-build
7.1 years ago by Eric Lim ★ 2.2k
22
votes
2
replies
6.7k
views
Tutorial: Use a workflow management tool to manage your computational pipelines
workflow-management snakemake pipeline
updated 2.6 years ago by 45k • written 9.0 years ago by ★ 2.2k
1
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0
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5.5k
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Comment: C: CLIP-seq database contains PAR-CLIP, HITS-CLIP, iCLIP, eCLIP, dCLIP, CLASH, CLEA
7.1 years ago by Eric Lim ★ 2.2k
2
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0
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5.5k
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Answer: A: Which database software is better for bioinformatics web development? MySQL or M
updated 7.1 years ago by 154k • written 7.1 years ago by ★ 2.2k
1
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0
replies
6.8k
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Answer: C: Get gene nams from ensembl ID or gene region
7.2 years ago by Eric Lim ★ 2.2k
1
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0
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2.4k
views
Comment: C: Best Bioinformatics Tools & Databases Targeting Genetics Disorders
7.2 years ago by Eric Lim ★ 2.2k
1
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1
reply
2.4k
views
Comment: C: Best Bioinformatics Tools & Databases Targeting Genetics Disorders
7.2 years ago by Eric Lim ★ 2.2k
2
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0
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2.4k
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Comment: C: Best Bioinformatics Tools & Databases Targeting Genetics Disorders
7.2 years ago by Eric Lim ★ 2.2k
1
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0
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10k
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Comment: C: Splicing factor database
7.2 years ago by Eric Lim ★ 2.2k
0
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0
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11k
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Comment: C: How many reads should I expect for paired end reads when coverage = 30 million?
7.2 years ago by Eric Lim ★ 2.2k
2
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1
reply
5.2k
views
Comment: C: Error with biopython pairwise aligner
7.3 years ago by Eric Lim ★ 2.2k
3
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2
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2.7k
views
Answer: A: Command to count reads in fastq file with last bases
7.3 years ago by Eric Lim ★ 2.2k
1
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0
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1.3k
views
Comment: C: Disease specific mutation database (non cancer)
7.3 years ago by Eric Lim ★ 2.2k
0
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0
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2.3k
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Comment: C: Finding polyA site from Ensembl GFF file
7.3 years ago by Eric Lim ★ 2.2k
0
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0
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1.1k
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Comment: C: RNA-seq- Alternative spliceforms
7.3 years ago by Eric Lim ★ 2.2k
1
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1
reply
2.3k
views
Answer: A: Finding polyA site from Ensembl GFF file
7.3 years ago by Eric Lim ★ 2.2k
5
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0
replies
2.8k
views
Answer: A: <3000$ in funding for computer equipment. Should I save this for cloud computing
7.3 years ago by Eric Lim ★ 2.2k
0
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0
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9.4k
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Comment: C: Quick Way to Annotate a Bed File
7.3 years ago by Eric Lim ★ 2.2k
2
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1
reply
4.3k
views
Comment: C: What server do you use?
7.3 years ago by Eric Lim ★ 2.2k
0
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1
reply
12k
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Comment: C: Realign BAM files to other reference file
7.3 years ago by Eric Lim ★ 2.2k
1
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0
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33k
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Comment: C: How to extract vcf.gz and vcf.gz.tbi
7.3 years ago by Eric Lim ★ 2.2k
1
vote
0
replies
12k
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Comment: C: Realign BAM files to other reference file
7.3 years ago by Eric Lim ★ 2.2k
2
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1
reply
2.7k
views
Best way to systematically select ENCODE data to download?
encode
7.3 years ago by Eric Lim ★ 2.2k
0
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1
reply
7.1k
views
Comment: C: Open Targets and programmatic access
7.3 years ago by Eric Lim ★ 2.2k
0
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1
reply
7.1k
views
Comment: C: Open Targets and programmatic access
7.3 years ago by Eric Lim ★ 2.2k
2
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0
replies
8.5k
views
Comment: C: How to make bash script operate fast for a 13gb VCF.gz file with 900000 rows and
7.3 years ago by Eric Lim ★ 2.2k
1
vote
1
reply
2.9k
views
Comment: C: How to work with 2.6 TB genome data which is deposited in the server?
7.3 years ago by Eric Lim ★ 2.2k
2
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0
replies
54k
views
Comment: C: Fast download of FASTQ files and metadata from the European Nucleotide Archive (
7.3 years ago by Eric Lim ★ 2.2k
0
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0
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4.3k
views
Comment: C: HTSeq-count in RNA-Seq
7.3 years ago by Eric Lim ★ 2.2k
0
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0
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4.3k
views
Comment: C: HTSeq-count in RNA-Seq
7.3 years ago by Eric Lim ★ 2.2k
0
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0
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1.5k
views
Comment: C: coverage of the reads over coding sequence only for one gene
7.3 years ago by Eric Lim ★ 2.2k
0
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0
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7.4k
views
Comment: C: STAR genome index problem
7.3 years ago by Eric Lim ★ 2.2k
2
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0
replies
7.4k
views
Comment: C: STAR genome index problem
7.4 years ago by Eric Lim ★ 2.2k
0
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0
replies
12k
views
Comment: C: tab to fasta file conversion
7.4 years ago by Eric Lim ★ 2.2k
1
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0
replies
7.2k
views
Comment: C: STAR ERROR: could not open genomeParameters.txt / How to increase RAM?
7.4 years ago by Eric Lim ★ 2.2k
1
vote
0
replies
16k
views
Answer: A: RNASeq user experience with Novogene?
7.4 years ago by Eric Lim ★ 2.2k
0
votes
1
reply
1.9k
views
Comment: C: Make artificial read count table
7.4 years ago by Eric Lim ★ 2.2k
1
vote
0
replies
2.7k
views
Comment: C: Effect of splice site mutations in mouse
7.4 years ago by Eric Lim ★ 2.2k
234 results • Page 3 of 5
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