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2
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4.4k
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Comment: C: eCLIP peak calling
6.9 years ago by Eric Lim ★ 2.2k
0
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0
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4.4k
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Comment: C: -bash: ./HeatMap.R: cannot execute binary file. Why is this?
6.9 years ago by Eric Lim ★ 2.2k
1
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1
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1.6k
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Comment: C: need code for sorting fasta header
6.9 years ago by Eric Lim ★ 2.2k
0
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1
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4.4k
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Comment: C: -bash: ./HeatMap.R: cannot execute binary file. Why is this?
6.9 years ago by Eric Lim ★ 2.2k
0
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2
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4.4k
views
Comment: C: -bash: ./HeatMap.R: cannot execute binary file. Why is this?
6.9 years ago by Eric Lim ★ 2.2k
0
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0
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2.4k
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Comment: C: 5', 3' SS and Intron retention read count using STAR out.tab
6.9 years ago by Eric Lim ★ 2.2k
0
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0
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2.3k
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Comment: C: Conda on MacOS
6.9 years ago by Eric Lim ★ 2.2k
3
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1
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2.4k
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Comment: C: 5', 3' ASS and Intron retention read count using STAR out.tab
6.9 years ago by Eric Lim ★ 2.2k
1
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1
reply
3.7k
views
Comment: C: Can snakemake work with multiple nodes from HPC?
6.9 years ago by Eric Lim ★ 2.2k
1
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1
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3.7k
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Comment: C: Can snakemake work with multiple nodes from HPC?
6.9 years ago by Eric Lim ★ 2.2k
1
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1
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3.7k
views
Comment: C: Can snakemake work with multiple nodes from HPC?
6.9 years ago by Eric Lim ★ 2.2k
0
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0
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1.1k
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Comment: C: How/where to obtain a bigwig or bedgraph of unmappable genome regions?
6.9 years ago by Eric Lim ★ 2.2k
1
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0
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7.4k
views
Answer: A: How to write the output in snakefile (snakemake) for bowtie2-build
6.9 years ago by Eric Lim ★ 2.2k
22
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2
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6.6k
views
Tutorial: Use a workflow management tool to manage your computational pipelines
workflow-management snakemake pipeline
updated 2.4 years ago by 45k • written 8.9 years ago by ★ 2.2k
1
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0
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5.2k
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Comment: C: CLIP-seq database contains PAR-CLIP, HITS-CLIP, iCLIP, eCLIP, dCLIP, CLASH, CLEA
7.0 years ago by Eric Lim ★ 2.2k
2
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0
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5.4k
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Answer: A: Which database software is better for bioinformatics web development? MySQL or M
updated 7.0 years ago by 153k • written 7.0 years ago by ★ 2.2k
1
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0
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6.7k
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Answer: C: Get gene nams from ensembl ID or gene region
7.0 years ago by Eric Lim ★ 2.2k
1
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0
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2.2k
views
Comment: C: Best Bioinformatics Tools & Databases Targeting Genetics Disorders
7.0 years ago by Eric Lim ★ 2.2k
1
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1
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2.2k
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Comment: C: Best Bioinformatics Tools & Databases Targeting Genetics Disorders
7.0 years ago by Eric Lim ★ 2.2k
2
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0
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2.2k
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Comment: C: Best Bioinformatics Tools & Databases Targeting Genetics Disorders
7.0 years ago by Eric Lim ★ 2.2k
1
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0
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9.9k
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Comment: C: Splicing factor database
7.0 years ago by Eric Lim ★ 2.2k
0
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0
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11k
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Comment: C: How many reads should I expect for paired end reads when coverage = 30 million?
7.1 years ago by Eric Lim ★ 2.2k
2
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1
reply
5.1k
views
Comment: C: Error with biopython pairwise aligner
7.1 years ago by Eric Lim ★ 2.2k
3
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2
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2.6k
views
Answer: A: Command to count reads in fastq file with last bases
7.1 years ago by Eric Lim ★ 2.2k
1
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0
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1.3k
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Comment: C: Disease specific mutation database (non cancer)
7.1 years ago by Eric Lim ★ 2.2k
0
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0
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2.1k
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Comment: C: Finding polyA site from Ensembl GFF file
7.2 years ago by Eric Lim ★ 2.2k
0
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0
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1.1k
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Comment: C: RNA-seq- Alternative spliceforms
7.2 years ago by Eric Lim ★ 2.2k
1
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1
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2.1k
views
Answer: A: Finding polyA site from Ensembl GFF file
7.2 years ago by Eric Lim ★ 2.2k
5
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0
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2.7k
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Answer: A: <3000$ in funding for computer equipment. Should I save this for cloud computing
7.2 years ago by Eric Lim ★ 2.2k
0
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0
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9.2k
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Comment: C: Quick Way to Annotate a Bed File
7.2 years ago by Eric Lim ★ 2.2k
2
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1
reply
4.1k
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Comment: C: What server do you use?
7.2 years ago by Eric Lim ★ 2.2k
0
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1
reply
12k
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Comment: C: Realign BAM files to other reference file
7.2 years ago by Eric Lim ★ 2.2k
1
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0
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32k
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Comment: C: How to extract vcf.gz and vcf.gz.tbi
7.2 years ago by Eric Lim ★ 2.2k
1
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0
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12k
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Comment: C: Realign BAM files to other reference file
7.2 years ago by Eric Lim ★ 2.2k
2
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1
reply
2.6k
views
Best way to systematically select ENCODE data to download?
encode
7.2 years ago by Eric Lim ★ 2.2k
0
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1
reply
6.9k
views
Comment: C: Open Targets and programmatic access
7.2 years ago by Eric Lim ★ 2.2k
0
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1
reply
6.9k
views
Comment: C: Open Targets and programmatic access
7.2 years ago by Eric Lim ★ 2.2k
2
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0
replies
8.2k
views
Comment: C: How to make bash script operate fast for a 13gb VCF.gz file with 900000 rows and
7.2 years ago by Eric Lim ★ 2.2k
1
vote
1
reply
2.7k
views
Comment: C: How to work with 2.6 TB genome data which is deposited in the server?
7.2 years ago by Eric Lim ★ 2.2k
2
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0
replies
52k
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Comment: C: Fast download of FASTQ files and metadata from the European Nucleotide Archive (
7.2 years ago by Eric Lim ★ 2.2k
0
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0
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4.2k
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Comment: C: HTSeq-count in RNA-Seq
7.2 years ago by Eric Lim ★ 2.2k
0
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0
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4.2k
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Comment: C: HTSeq-count in RNA-Seq
7.2 years ago by Eric Lim ★ 2.2k
0
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0
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1.4k
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Comment: C: coverage of the reads over coding sequence only for one gene
7.2 years ago by Eric Lim ★ 2.2k
0
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0
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7.3k
views
Comment: C: STAR genome index problem
7.2 years ago by Eric Lim ★ 2.2k
2
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0
replies
7.3k
views
Comment: C: STAR genome index problem
7.2 years ago by Eric Lim ★ 2.2k
0
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0
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12k
views
Comment: C: tab to fasta file conversion
7.2 years ago by Eric Lim ★ 2.2k
1
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0
replies
7.0k
views
Comment: C: STAR ERROR: could not open genomeParameters.txt / How to increase RAM?
7.2 years ago by Eric Lim ★ 2.2k
1
vote
0
replies
15k
views
Answer: A: RNASeq user experience with Novogene?
7.2 years ago by Eric Lim ★ 2.2k
0
votes
1
reply
1.8k
views
Comment: C: Make artificial read count table
7.2 years ago by Eric Lim ★ 2.2k
1
vote
0
replies
2.6k
views
Comment: C: Effect of splice site mutations in mouse
7.2 years ago by Eric Lim ★ 2.2k
234 results • Page 3 of 5
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