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879
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Answer: Answer: RnBeads SLURM submission problem.
2.0 years ago by Ido Tamir 5.2k
0
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0
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788
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Comment: C: How to fill with dots empty fields in a dataframe in R when splitting a column b
2.6 years ago by Ido Tamir 5.2k
1
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1
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787
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Comment: C: Data management in R, perl or python
2.6 years ago by Ido Tamir 5.2k
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0
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1.3k
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Answer: A: New data transformation tool for Windows and Mac
2.7 years ago by Ido Tamir 5.2k
1
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0
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1.1k
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Comment: C: how to get total read count, mapped read count and unmapped read count from mult
2.7 years ago by Ido Tamir 5.2k
0
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0
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675
views
Comment: C: Running a code in batch mode on a list of files
2.8 years ago by Ido Tamir 5.2k
0
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0
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751
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Comment: C: Extracting rows on basis of specific column values in R
2.8 years ago by Ido Tamir 5.2k
1
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0
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1.4k
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Comment: C: Trouble with choosing the right reference transcriptome file for mm10
2.8 years ago by Ido Tamir 5.2k
1
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0
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1.5k
views
Answer: A: RNA-Seq differential gene expression without biological and technical replicates
2.9 years ago by Ido Tamir 5.2k
1
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1
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1.9k
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Answer: C: How to get DE genes without replicates using EdgeR
2.9 years ago by Ido Tamir 5.2k
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0
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787
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Comment: C: How many of the reads end up being counted by HTSeq count
2.9 years ago by Ido Tamir 5.2k
1
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1
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787
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Answer: A: How many of the reads end up being counted by HTSeq count
2.9 years ago by Ido Tamir 5.2k
0
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0
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974
views
Comment: C: How can I extract the sequencing reads containing a specific linker/tag?
3.0 years ago by Ido Tamir 5.2k
1
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0
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974
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Answer: A: How can I extract the sequencing reads containing a specific linker/tag?
3.0 years ago by Ido Tamir 5.2k
0
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0
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618
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Answer: A: Adding annotations to the bam file from the txt file
3.0 years ago by Ido Tamir 5.2k
0
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0
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1.5k
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Comment: C: problem installing cutadapt
3.3 years ago by Ido Tamir 5.2k
0
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1
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1.5k
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Comment: A: problem installing cutadapt
3.3 years ago by Ido Tamir 5.2k
0
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0
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879
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Comment: C: HTseq does not generate any counts file
3.4 years ago by Ido Tamir 5.2k
0
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1
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879
views
Comment: C: HTseq does not generate any counts file
3.4 years ago by Ido Tamir 5.2k
0
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1
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879
views
Answer: A: HTseq does not generate any counts file
3.4 years ago by Ido Tamir 5.2k
2
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1
reply
2.7k
views
Comment: C: RNA seq library size
3.4 years ago by Ido Tamir 5.2k
1
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0
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1.8k
views
Answer: A: How to average different rows of different groups?
updated 3.4 years ago by 39k • written 9.0 years ago by 5.2k
2
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0
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2.4k
views
Answer: A: Overlaid XY plot with two different colors for control and target genes
updated 3.4 years ago by 39k • written 9.1 years ago by 5.2k
2
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1
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15k
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Answer: A: Binning Of Chromosome Data
updated 3.4 years ago by 39k • written 10.1 years ago by 5.2k
0
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0
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1.5k
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Comment: C: NGS pipelines @ free of cost
updated 3.4 years ago by 39k • written 7.4 years ago by 5.2k
1
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0
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22k
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Comment: C: ggplot second y-axis: how to specify a secondary axis if I don't want to scale m
3.4 years ago by Ido Tamir 5.2k
1
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1
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22k
views
Answer: A: ggplot second y-axis: how to specify a secondary axis if I don't want to scale m
3.4 years ago by Ido Tamir 5.2k
1
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0
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2.4k
views
Answer: A: NGS Data Storage Best Practices (Clinical)
3.5 years ago by Ido Tamir 5.2k
1
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0
replies
8.8k
views
Answer: A: Does Illumina Undetermined Fastq files contain barcodes
updated 3.5 years ago by 39k • written 7.5 years ago by 5.2k
0
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1
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898
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Comment: C: Help with awk command
3.6 years ago by Ido Tamir 5.2k
0
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0
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1.3k
views
Comment: C: concat fasta sequences based on some common header string
3.6 years ago by Ido Tamir 5.2k
1
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0
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8.0k
views
Answer: A: Number of aligned reads in exon, intron ...
updated 3.6 years ago by 39k • written 9.1 years ago by 5.2k
0
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4
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6.5k
views
Answer: A: Non-Annotated Long Noncoding Rna Candidates
updated 3.7 years ago by 39k • written 11.7 years ago by 5.2k
4
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0
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7.2k
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Comment: C: Picking A Programming Language And Where To Begin
updated 3.7 years ago by 39k • written 11.8 years ago by 5.2k
4
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1
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3.7k
views
Answer: A: Quick Visual Inspection Of Mapping Images For A List Of Regions
updated 3.7 years ago by 39k • written 11.9 years ago by 5.2k
3
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0
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1.7k
views
Answer: A: More informative GSEA enrichment ggplot
3.7 years ago by Ido Tamir 5.2k
0
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0
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4.6k
views
Comment: C: Rsamtools-Countoverlaps
updated 4.0 years ago by 39k • written 11.8 years ago by 5.2k
1
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0
replies
4.6k
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Answer: A: Rsamtools-Countoverlaps
updated 4.0 years ago by 39k • written 11.8 years ago by 5.2k
2
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4
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5.1k
views
Answer: A: How To Create A Matrix In R?
updated 4.0 years ago by 39k • written 11.8 years ago by 5.2k
0
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1
reply
2.0k
views
Comment: C: BCL files as deliverables from a sequencing center
4.0 years ago by Ido Tamir 5.2k
0
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0
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2.0k
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Comment: C: BCL files as deliverables from a sequencing center
4.0 years ago by Ido Tamir 5.2k
5
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5
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2.0k
views
Forum: BCL files as deliverables from a sequencing center
serviceprovider corefacility Forum
4.0 years ago by Ido Tamir 5.2k
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0
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1.1k
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Answer: A: Statistics on differentially expressed genes
4.2 years ago by Ido Tamir 5.2k
2
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0
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1.0k
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Comment: C: DESeq2-issues with input data
4.2 years ago by Ido Tamir 5.2k
2
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1
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7.4k
views
Answer: A: How should I handle the raw reads with failed per base sequence content in fastQ
4.2 years ago by Ido Tamir 5.2k
1
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0
replies
4.5k
views
Answer: A: Extract overrepresented sequences from fastq or fastqc
4.2 years ago by Ido Tamir 5.2k
0
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1
reply
1.8k
views
Answer: A: How to take out sequences with barcode?
4.2 years ago by Ido Tamir 5.2k
0
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0
replies
9.1k
views
Comment: C: How To Get Gene Regions +3Kb Upstream
updated 4.4 years ago by 39k • written 10.7 years ago by 5.2k
2
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0
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9.1k
views
Answer: A: How To Get Gene Regions +3Kb Upstream
updated 4.4 years ago by 39k • written 10.7 years ago by 5.2k
0
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0
replies
1.4k
views
Comment: C: RNA-Seq Differential Expression Bash Scripting Error
4.4 years ago by Ido Tamir 5.2k
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