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201
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Comment: Comment: heterozygous variant on the X chromosome
1 day ago by benformatics 4.1k
1
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1
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720
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Comment: Comment: HTSeq-count vs. FeatureCounts: Significant Difference in Results
5 weeks ago by benformatics 4.1k
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0
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1.1k
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Comment: Comment: RNA-Seq mutation calling without germline data
6 weeks ago by benformatics 4.1k
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0
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715
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Comment: Comment: How the field has changed in the last 5 years, and 25 years (up to 2024)
6 weeks ago by benformatics 4.1k
1
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1
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679
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Comment: Comment: Problem obtaining RNA-seq counts for whole gene (intron and exon), exon only, an
10 weeks ago by benformatics 4.1k
1
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1
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1.7k
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Comment: Comment: New Illumina error mode, new BBTools release (39.09) to deal with it
12 weeks ago by benformatics 4.1k
0
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1
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3.4k
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Comment: Comment: NGS forensics: how to know if data is fabricated
7 months ago by benformatics 4.1k
2
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0
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3.4k
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Comment: Comment: NGS forensics: how to know if data is fabricated
7 months ago by benformatics 4.1k
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0
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698
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Comment: Comment: STAR GeneCounts for most genes are 0
13 months ago by benformatics 4.1k
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0
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693
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Comment: Comment: unbiased clustering of these top 50 genes in seurat
13 months ago by benformatics 4.1k
1
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0
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709
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Comment: Comment: How to plot two categoric variables in ggridges?
13 months ago by benformatics 4.1k
1
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1
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4.3k
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Comment: Comment: Why should ATAC-seq mapped reads be shifted +4 and -5 for +strand and -strand, r
14 months ago by benformatics 4.1k
1
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1
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622
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Comment: Comment: Assigning cell types to cells based on expression of cell surface markers
17 months ago by benformatics 4.1k
1
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0
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1.0k
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Comment: Comment: Identify Alternative Splicing Event using exon and junction count table
17 months ago by benformatics 4.1k
0
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1
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1.4k
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Comment: Comment: Contig labels in BAM off by 1, how do I fix it?
17 months ago by benformatics 4.1k
1
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1
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1.4k
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Comment: Comment: Contig labels in BAM off by 1, how do I fix it?
17 months ago by benformatics 4.1k
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0
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2.4k
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Comment: Comment: monocle single cell differential expression: error message for HSMM <- estimateD
17 months ago by benformatics 4.1k
0
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1
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1.3k
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Comment: Comment: gene id
17 months ago by benformatics 4.1k
0
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1
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1.3k
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Comment: Comment: gene id
17 months ago by benformatics 4.1k
0
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0
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1.2k
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Comment: Comment: Analize RNA-seq data using Hisat2
17 months ago by benformatics 4.1k
1
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0
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1.0k
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Comment: Comment: Filtering mitochondrial reads from ATAC-Seq aligned reads- what to do with reads
18 months ago by benformatics 4.1k
1
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0
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870
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Comment: Comment: Is the gene-specific PCR efficiency a serious concern for intrasample comparison
19 months ago by benformatics 4.1k
0
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1
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1.3k
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Comment: Comment: error in Genome Mepping by BWA tools in Linux
19 months ago by benformatics 4.1k
0
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0
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873
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Comment: Comment: Chance that DNA with 3N nucleotide encodes 2 protein with size of N amino-acids
19 months ago by benformatics 4.1k
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0
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1.5k
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Comment: Comment: How do I project known tSNE coordinates onto SeuratObject
19 months ago by benformatics 4.1k
0
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1
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873
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Comment: Comment: Chance that DNA with 3N nucleotide encodes 2 protein with size of N amino-acids
19 months ago by benformatics 4.1k
0
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1
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5.5k
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Comment: Comment: I want to correct the erroneous barcode file, and the Python code that I've writ
20 months ago by benformatics 4.1k
1
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1
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5.5k
views
Comment: Comment: I want to correct the erroneous barcode file, and the Python code that I've writ
20 months ago by benformatics 4.1k
0
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0
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1.2k
views
Comment: Comment: Remove string from Seurat object metadata
20 months ago by benformatics 4.1k
1
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1
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5.5k
views
Comment: Comment: I want to correct the erroneous barcode file, and the Python code that I've writ
20 months ago by benformatics 4.1k
0
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1
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5.6k
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Comment: Comment: What are the advantages of using the T2T as a reference vs GRCh38 today?
20 months ago by benformatics 4.1k
0
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0
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741
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Comment: Comment: Merged BAM has more reads than sum of parts
20 months ago by benformatics 4.1k
0
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1
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2.0k
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Comment: Comment: Can you swap reference genome releases ?
20 months ago by benformatics 4.1k
0
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0
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811
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Comment: Comment: Non-zero expression counts from deleted genes
20 months ago by benformatics 4.1k
0
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0
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895
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Comment: Comment: R script error R aborted or encountered a fatal error
20 months ago by benformatics 4.1k
0
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1
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811
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Comment: Comment: Non-zero expression counts from deleted genes
20 months ago by benformatics 4.1k
3
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0
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862
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Comment: Comment: advice on course selection for a bioinformatics career.
21 months ago by benformatics 4.1k
0
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0
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780
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Comment: Comment: Processing fastqs generated by inDrop protocol
21 months ago by benformatics 4.1k
1
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0
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1.4k
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Comment: Comment: samtools idxstats not removing ChrM
21 months ago by benformatics 4.1k
0
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1
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787
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Comment: Comment: Problem in converting SAM to BAM file by DROP SEQ
21 months ago by benformatics 4.1k
1
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0
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1.4k
views
Comment: Comment: samtools idxstats not removing ChrM
21 months ago by benformatics 4.1k
0
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0
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2.4k
views
Comment: Comment: How does 10x Genomics 3' single cell data have reads aligning to exons that aren
21 months ago by benformatics 4.1k
0
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1
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912
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Comment: Comment: CABSDock:fortran 2018 deleted feature
21 months ago by benformatics 4.1k
1
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1
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631
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Comment: Comment: Bar plots at genera level with absolute percentage difference between two groups
21 months ago by benformatics 4.1k
0
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1
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5.7k
views
Comment: Comment: GRanges objects don't support [[, as.list(), lapply(), or unlist() at the moment
updated 6 months ago by 44k • written 21 months ago by 4.1k
0
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1
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5.7k
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Comment: Comment: GRanges objects don't support [[, as.list(), lapply(), or unlist() at the moment
updated 6 months ago by 44k • written 21 months ago by 4.1k
0
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1
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5.7k
views
Comment: Comment: GRanges objects don't support [[, as.list(), lapply(), or unlist() at the moment
21 months ago by benformatics 4.1k
0
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0
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848
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Comment: Comment: RNAseq matrix containing zero values
21 months ago by benformatics 4.1k
0
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0
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2.2k
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Comment: Comment: change color and scale in SpatialFeaturePlot
23 months ago by benformatics 4.1k
0
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1
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1.3k
views
Comment: Comment: Some questions on RAD paired-end sequencing
23 months ago by benformatics 4.1k
271 results • Page 1 of 6
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