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Comment: Comment: GSEA from broad institute normalization method
13 days ago by benformatics 3.4k
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247
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Comment: Comment: change color and scale in SpatialFeaturePlot
16 days ago by benformatics 3.4k
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1
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265
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Comment: Comment: Some questions on RAD paired-end sequencing
17 days ago by benformatics 3.4k
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461
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Comment: Comment: How to remove un-paired reads from BAM after filtering?
24 days ago by benformatics 3.4k
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461
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Comment: Comment: How to remove un-paired reads from BAM after filtering?
24 days ago by benformatics 3.4k
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368
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Comment: Comment: What exactly are unmappable regions?
25 days ago by benformatics 3.4k
3
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1
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447
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Comment: Comment: Why did my data get worse after trimming with trimmomatic?
25 days ago by benformatics 3.4k
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1
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412
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Comment: Comment: Human transcriptome STAR multi-mapped problem
7 weeks ago by benformatics 3.4k
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2
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990
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Comment: Comment: How to find rna strand direction before alignment?
8 weeks ago by benformatics 3.4k
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2
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990
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Comment: Comment: How to find rna strand direction before alignment?
8 weeks ago by benformatics 3.4k
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1
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4.5k
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Comment: Comment: CPM or TPM in GSEA analysis
9 weeks ago by benformatics 3.4k
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1
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4.5k
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Comment: Comment: CPM or TPM in GSEA analysis
9 weeks ago by benformatics 3.4k
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1
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376
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Comment: Comment: Proportion of mitochondrial reads atac seq
10 weeks ago by benformatics 3.4k
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504
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Comment: Comment: How much RAM for scRNAseq 200K cells?
3 months ago by benformatics 3.4k
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513
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Comment: Comment: scRNA-Seq datasets with labels
3 months ago by benformatics 3.4k
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1
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291
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Comment: Comment: Does chemistry have significant effects on my single nucleus dataset?
3 months ago by benformatics 3.4k
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370
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Comment: Comment: How can I get counts from transgenic expression in RNA-seq data?
3 months ago by benformatics 3.4k
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318
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Comment: Comment: Why an extremely large number of reads are mapped to several chromosomes in RNA-
3 months ago by benformatics 3.4k
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1
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513
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Comment: Comment: scRNA-Seq datasets with labels
3 months ago by benformatics 3.4k
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882
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Comment: Comment: Quantseq 3' seq alignment with kallisto
3 months ago by benformatics 3.4k
0
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0
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306
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Comment: Comment: convert a list of plotly plots to an HTML output
3 months ago by benformatics 3.4k
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1
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1.0k
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Comment: Comment: Find ~1 Mb regions of genome that are shared by two or more WGS samples?
3 months ago by benformatics 3.4k
0
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1
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438
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Comment: Comment: Public availability of de-identified patient data
3 months ago by benformatics 3.4k
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165
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Comment: Comment: Error in mitch reports in R
4 months ago by benformatics 3.4k
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0
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723
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Comment: Comment: Unaligned Reads From Bowtie2
4 months ago by benformatics 3.4k
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1
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1.0k
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Comment: Comment: Find ~1 Mb regions of genome that are shared by two or more WGS samples?
4 months ago by benformatics 3.4k
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0
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527
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Comment: Comment: Allele flip in GATK
4 months ago by benformatics 3.4k
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1
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723
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Comment: Comment: Unaligned Reads From Bowtie2
4 months ago by benformatics 3.4k
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0
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1.6k
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Comment: Comment: star --readFilesIn error when using unmapped.out.mate1/2 files
4 months ago by benformatics 3.4k
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1
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1.0k
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Comment: Comment: Find ~1 Mb regions of genome that are shared by two or more WGS samples?
4 months ago by benformatics 3.4k
1
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0
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269
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Comment: Comment: Manually adding genes of interest to transcriptome for RNASeq DE?
4 months ago by benformatics 3.4k
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0
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284
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Comment: Comment: How to analyse different sample number fastq files
4 months ago by benformatics 3.4k
1
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0
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472
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Comment: Comment: rMATS reads used is zero (0)
4 months ago by benformatics 3.4k
0
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1
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472
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Comment: Comment: rMATS reads used is zero (0)
4 months ago by benformatics 3.4k
0
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1
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1.0k
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Comment: Comment: Find ~1 Mb regions of genome that are shared by two or more WGS samples?
4 months ago by benformatics 3.4k
0
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1
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534
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Comment: Comment: 5' and 3' UTRs in RNA regulation
4 months ago by benformatics 3.4k
1
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0
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460
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Comment: Comment: Identifying tumor vs normal cells in scRNAseq samples
5 months ago by benformatics 3.4k
0
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0
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518
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Comment: Comment: When a gene "fails" (ie doesn't express optimally or at all), does another gene
5 months ago by benformatics 3.4k
0
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0
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721
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Comment: Comment: Leaky RNA
5 months ago by benformatics 3.4k
2
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1
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24k
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Comment: Comment: read depth using samtools
5 months ago by benformatics 3.4k
0
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1
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24k
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Comment: Comment: read depth using samtools
5 months ago by benformatics 3.4k
1
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0
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254
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Comment: Comment: Statistical test to decide key clusters
5 months ago by benformatics 3.4k
1
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0
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425
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Comment: Comment: Difference in sashimi plot between single-cell versus bulk RNA-seq data
6 months ago by benformatics 3.4k
0
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1
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2.3k
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Comment: Comment: Extract reads from BAM file with known variant
6 months ago by benformatics 3.4k
0
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1
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2.3k
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Comment: Comment: Extract reads from BAM file with known variant
6 months ago by benformatics 3.4k
0
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0
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2.3k
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Comment: Comment: Extract reads from BAM file with known variant
6 months ago by benformatics 3.4k
0
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1
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2.3k
views
Comment: Comment: Extract reads from BAM file with known variant
6 months ago by benformatics 3.4k
0
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1
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2.3k
views
Comment: Comment: Extract reads from BAM file with known variant
6 months ago by benformatics 3.4k
0
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1
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2.3k
views
Comment: Comment: Extract reads from BAM file with known variant
6 months ago by benformatics 3.4k
0
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1
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2.3k
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Comment: Comment: Extract reads from BAM file with known variant
6 months ago by benformatics 3.4k
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