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Comment: Comment: STAR GeneCounts for most genes are 0
5 months ago by benformatics 3.9k
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504
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Comment: Comment: unbiased clustering of these top 50 genes in seurat
6 months ago by benformatics 3.9k
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453
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Comment: Comment: How to plot two categoric variables in ggridges?
6 months ago by benformatics 3.9k
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3.5k
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Comment: Comment: Why should ATAC-seq mapped reads be shifted +4 and -5 for +strand and -strand, r
7 months ago by benformatics 3.9k
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1
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478
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Comment: Comment: Assigning cell types to cells based on expression of cell surface markers
9 months ago by benformatics 3.9k
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710
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Comment: Comment: Identify Alternative Splicing Event using exon and junction count table
9 months ago by benformatics 3.9k
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995
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Comment: Comment: Contig labels in BAM off by 1, how do I fix it?
9 months ago by benformatics 3.9k
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1
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995
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Comment: Comment: Contig labels in BAM off by 1, how do I fix it?
9 months ago by benformatics 3.9k
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1.8k
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Comment: Comment: monocle single cell differential expression: error message for HSMM <- estimateD
9 months ago by benformatics 3.9k
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1
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981
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Comment: Comment: gene id
10 months ago by benformatics 3.9k
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1
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981
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Comment: Comment: gene id
10 months ago by benformatics 3.9k
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937
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Comment: Comment: Analize RNA-seq data using Hisat2
10 months ago by benformatics 3.9k
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721
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Comment: Comment: Filtering mitochondrial reads from ATAC-Seq aligned reads- what to do with reads
10 months ago by benformatics 3.9k
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693
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Comment: Comment: Is the gene-specific PCR efficiency a serious concern for intrasample comparison
11 months ago by benformatics 3.9k
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1
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1.0k
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Comment: Comment: error in Genome Mepping by BWA tools in Linux
12 months ago by benformatics 3.9k
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0
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679
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Comment: Comment: Chance that DNA with 3N nucleotide encodes 2 protein with size of N amino-acids
12 months ago by benformatics 3.9k
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1.0k
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Comment: Comment: How do I project known tSNE coordinates onto SeuratObject
12 months ago by benformatics 3.9k
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679
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Comment: Comment: Chance that DNA with 3N nucleotide encodes 2 protein with size of N amino-acids
12 months ago by benformatics 3.9k
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1
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4.3k
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Comment: Comment: I want to correct the erroneous barcode file, and the Python code that I've writ
12 months ago by benformatics 3.9k
1
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1
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4.3k
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Comment: Comment: I want to correct the erroneous barcode file, and the Python code that I've writ
12 months ago by benformatics 3.9k
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0
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952
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Comment: Comment: Remove string from Seurat object metadata
12 months ago by benformatics 3.9k
1
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1
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4.3k
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Comment: Comment: I want to correct the erroneous barcode file, and the Python code that I've writ
12 months ago by benformatics 3.9k
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1
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4.4k
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Comment: Comment: What are the advantages of using the T2T as a reference vs GRCh38 today?
12 months ago by benformatics 3.9k
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0
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551
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Comment: Comment: Merged BAM has more reads than sum of parts
12 months ago by benformatics 3.9k
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1
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1.5k
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Comment: Comment: Can you swap reference genome releases ?
12 months ago by benformatics 3.9k
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622
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Comment: Comment: Non-zero expression counts from deleted genes
12 months ago by benformatics 3.9k
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0
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734
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Comment: Comment: R script error R aborted or encountered a fatal error
12 months ago by benformatics 3.9k
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1
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622
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Comment: Comment: Non-zero expression counts from deleted genes
12 months ago by benformatics 3.9k
3
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698
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Comment: Comment: advice on course selection for a bioinformatics career.
13 months ago by benformatics 3.9k
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619
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Comment: Comment: Processing fastqs generated by inDrop protocol
13 months ago by benformatics 3.9k
1
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0
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1.1k
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Comment: Comment: samtools idxstats not removing ChrM
13 months ago by benformatics 3.9k
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1
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621
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Comment: Comment: Problem in converting SAM to BAM file by DROP SEQ
13 months ago by benformatics 3.9k
1
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0
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1.1k
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Comment: Comment: samtools idxstats not removing ChrM
13 months ago by benformatics 3.9k
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0
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1.5k
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Comment: Comment: How does 10x Genomics 3' single cell data have reads aligning to exons that aren
13 months ago by benformatics 3.9k
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1
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752
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Comment: Comment: CABSDock:fortran 2018 deleted feature
14 months ago by benformatics 3.9k
1
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1
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498
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Comment: Comment: Bar plots at genera level with absolute percentage difference between two groups
14 months ago by benformatics 3.9k
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1
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4.0k
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Comment: Comment: GRanges objects don't support [[, as.list(), lapply(), or unlist() at the moment
14 months ago by benformatics 3.9k
0
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1
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4.0k
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Comment: Comment: GRanges objects don't support [[, as.list(), lapply(), or unlist() at the moment
14 months ago by benformatics 3.9k
0
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1
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4.0k
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Comment: Comment: GRanges objects don't support [[, as.list(), lapply(), or unlist() at the moment
14 months ago by benformatics 3.9k
0
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0
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686
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Comment: Comment: RNAseq matrix containing zero values
14 months ago by benformatics 3.9k
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0
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1.7k
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Comment: Comment: change color and scale in SpatialFeaturePlot
15 months ago by benformatics 3.9k
0
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1
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958
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Comment: Comment: Some questions on RAD paired-end sequencing
15 months ago by benformatics 3.9k
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0
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1.4k
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Comment: Comment: How to remove un-paired reads from BAM after filtering?
15 months ago by benformatics 3.9k
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1
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1.4k
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Comment: Comment: How to remove un-paired reads from BAM after filtering?
15 months ago by benformatics 3.9k
1
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0
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873
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Comment: Comment: What exactly are unmappable regions?
15 months ago by benformatics 3.9k
3
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1
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1.3k
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Comment: Comment: Why did my data get worse after trimming with trimmomatic?
15 months ago by benformatics 3.9k
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1
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935
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Comment: Comment: Human transcriptome STAR multi-mapped problem
16 months ago by benformatics 3.9k
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2
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2.4k
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Comment: Comment: How to find rna strand direction before alignment?
16 months ago by benformatics 3.9k
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2
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2.4k
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Comment: Comment: How to find rna strand direction before alignment?
16 months ago by benformatics 3.9k
0
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1
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8.1k
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Comment: Comment: CPM or TPM in GSEA analysis
17 months ago by benformatics 3.9k
263 results • Page 1 of 6
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