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328
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Comment:
Comment: STAR GeneCounts for most genes are 0
15 days ago by
benformatics
3.8k
0
votes
0
replies
318
views
Comment:
Comment: unbiased clustering of these top 50 genes in seurat
4 weeks ago by
benformatics
3.8k
1
vote
0
replies
278
views
Comment:
Comment: How to plot two categoric variables in ggridges?
4 weeks ago by
benformatics
3.8k
1
vote
1
reply
2.9k
views
Comment:
Comment: Why should ATAC-seq mapped reads be shifted +4 and -5 for +strand and -strand, r
8 weeks ago by
benformatics
3.8k
1
vote
1
reply
302
views
Comment:
Comment: Assigning cell types to cells based on expression of cell surface markers
4 months ago by
benformatics
3.8k
1
vote
0
replies
496
views
Comment:
Comment: Identify Alternative Splicing Event using exon and junction count table
4 months ago by
benformatics
3.8k
0
votes
1
reply
781
views
Comment:
Comment: Contig labels in BAM off by 1, how do I fix it?
4 months ago by
benformatics
3.8k
1
vote
1
reply
781
views
Comment:
Comment: Contig labels in BAM off by 1, how do I fix it?
4 months ago by
benformatics
3.8k
0
votes
0
replies
1.5k
views
Comment:
Comment: monocle single cell differential expression: error message for HSMM <- estimateD
4 months ago by
benformatics
3.8k
0
votes
1
reply
735
views
Comment:
Comment: gene id
5 months ago by
benformatics
3.8k
0
votes
1
reply
735
views
Comment:
Comment: gene id
5 months ago by
benformatics
3.8k
0
votes
0
replies
620
views
Comment:
Comment: Analize RNA-seq data using Hisat2
5 months ago by
benformatics
3.8k
1
vote
0
replies
500
views
Comment:
Comment: Filtering mitochondrial reads from ATAC-Seq aligned reads- what to do with reads
5 months ago by
benformatics
3.8k
1
vote
0
replies
551
views
Comment:
Comment: Is the gene-specific PCR efficiency a serious concern for intrasample comparison
6 months ago by
benformatics
3.8k
0
votes
1
reply
802
views
Comment:
Comment: error in Genome Mepping by BWA tools in Linux
7 months ago by
benformatics
3.8k
0
votes
0
replies
553
views
Comment:
Comment: Chance that DNA with 3N nucleotide encodes 2 protein with size of N amino-acids
7 months ago by
benformatics
3.8k
0
votes
0
replies
744
views
Comment:
Comment: How do I project known tSNE coordinates onto SeuratObject
7 months ago by
benformatics
3.8k
0
votes
1
reply
553
views
Comment:
Comment: Chance that DNA with 3N nucleotide encodes 2 protein with size of N amino-acids
7 months ago by
benformatics
3.8k
0
votes
1
reply
3.6k
views
Comment:
Comment: I want to correct the erroneous barcode file, and the Python code that I've writ
7 months ago by
benformatics
3.8k
1
vote
1
reply
3.6k
views
Comment:
Comment: I want to correct the erroneous barcode file, and the Python code that I've writ
7 months ago by
benformatics
3.8k
0
votes
0
replies
663
views
Comment:
Comment: Remove string from Seurat object metadata
7 months ago by
benformatics
3.8k
1
vote
1
reply
3.6k
views
Comment:
Comment: I want to correct the erroneous barcode file, and the Python code that I've writ
7 months ago by
benformatics
3.8k
0
votes
1
reply
3.6k
views
Comment:
Comment: What are the advantages of using the T2T as a reference vs GRCh38 today?
7 months ago by
benformatics
3.8k
0
votes
0
replies
422
views
Comment:
Comment: Merged BAM has more reads than sum of parts
7 months ago by
benformatics
3.8k
0
votes
1
reply
1.0k
views
Comment:
Comment: Can you swap reference genome releases ?
7 months ago by
benformatics
3.8k
0
votes
0
replies
486
views
Comment:
Comment: Non-zero expression counts from deleted genes
7 months ago by
benformatics
3.8k
0
votes
0
replies
558
views
Comment:
Comment: R script error R aborted or encountered a fatal error
7 months ago by
benformatics
3.8k
0
votes
1
reply
486
views
Comment:
Comment: Non-zero expression counts from deleted genes
7 months ago by
benformatics
3.8k
3
votes
0
replies
559
views
Comment:
Comment: advice on course selection for a bioinformatics career.
8 months ago by
benformatics
3.8k
0
votes
0
replies
512
views
Comment:
Comment: Processing fastqs generated by inDrop protocol
8 months ago by
benformatics
3.8k
1
vote
0
replies
879
views
Comment:
Comment: samtools idxstats not removing ChrM
8 months ago by
benformatics
3.8k
0
votes
1
reply
494
views
Comment:
Comment: Problem in converting SAM to BAM file by DROP SEQ
8 months ago by
benformatics
3.8k
1
vote
0
replies
879
views
Comment:
Comment: samtools idxstats not removing ChrM
8 months ago by
benformatics
3.8k
0
votes
0
replies
1.1k
views
Comment:
Comment: How does 10x Genomics 3' single cell data have reads aligning to exons that aren
8 months ago by
benformatics
3.8k
0
votes
1
reply
616
views
Comment:
Comment: CABSDock:fortran 2018 deleted feature
9 months ago by
benformatics
3.8k
1
vote
1
reply
404
views
Comment:
Comment: Bar plots at genera level with absolute percentage difference between two groups
9 months ago by
benformatics
3.8k
0
votes
1
reply
3.0k
views
Comment:
Comment: GRanges objects don't support [[, as.list(), lapply(), or unlist() at the moment
9 months ago by
benformatics
3.8k
0
votes
1
reply
3.0k
views
Comment:
Comment: GRanges objects don't support [[, as.list(), lapply(), or unlist() at the moment
9 months ago by
benformatics
3.8k
0
votes
1
reply
3.0k
views
Comment:
Comment: GRanges objects don't support [[, as.list(), lapply(), or unlist() at the moment
9 months ago by
benformatics
3.8k
0
votes
0
replies
540
views
Comment:
Comment: RNAseq matrix containing zero values
9 months ago by
benformatics
3.8k
0
votes
0
replies
1.3k
views
Comment:
Comment: change color and scale in SpatialFeaturePlot
10 months ago by
benformatics
3.8k
0
votes
1
reply
760
views
Comment:
Comment: Some questions on RAD paired-end sequencing
10 months ago by
benformatics
3.8k
0
votes
0
replies
1.1k
views
Comment:
Comment: How to remove un-paired reads from BAM after filtering?
10 months ago by
benformatics
3.8k
0
votes
1
reply
1.1k
views
Comment:
Comment: How to remove un-paired reads from BAM after filtering?
10 months ago by
benformatics
3.8k
1
vote
0
replies
711
views
Comment:
Comment: What exactly are unmappable regions?
10 months ago by
benformatics
3.8k
3
votes
1
reply
1.0k
views
Comment:
Comment: Why did my data get worse after trimming with trimmomatic?
10 months ago by
benformatics
3.8k
0
votes
1
reply
754
views
Comment:
Comment: Human transcriptome STAR multi-mapped problem
11 months ago by
benformatics
3.8k
1
vote
2
replies
2.0k
views
Comment:
Comment: How to find rna strand direction before alignment?
11 months ago by
benformatics
3.8k
0
votes
2
replies
2.0k
views
Comment:
Comment: How to find rna strand direction before alignment?
11 months ago by
benformatics
3.8k
0
votes
1
reply
6.8k
views
Comment:
Comment: CPM or TPM in GSEA analysis
12 months ago by
benformatics
3.8k
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