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News: NGSprint21: Hackathon in Bioinformatics
NGSchool hackathon
updated 2.8 years ago by 141k • written 2.8 years ago by ★ 2.9k
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1.2k
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Comment: Comment: CNVkit Feedback about panel or normales needed
2.8 years ago by German.M.Demidov ★ 2.9k
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873
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Comment: Comment: What is the well-recognized standard of coverage uniformity
2.8 years ago by German.M.Demidov ★ 2.9k
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1
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1.2k
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Comment: Comment: CNVkit Feedback about panel or normales needed
2.8 years ago by German.M.Demidov ★ 2.9k
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5
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1.4k
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UMAP and "equal" objects
visualization
updated 2.8 years ago by • 0 • written 2.9 years ago by ★ 2.9k
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1.4k
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Comment: Comment: UMAP and "equal" objects
2.9 years ago by German.M.Demidov ★ 2.9k
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534
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Comment: Comment: Control-FREEC significance
2.9 years ago by German.M.Demidov ★ 2.9k
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1
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711
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Comment: Comment: X-transposed region on chromosome Y
2.9 years ago by German.M.Demidov ★ 2.9k
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636
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Comment: Comment: Ideas to represent RNA-seq expression profile (Z-scores) and the significance le
2.9 years ago by German.M.Demidov ★ 2.9k
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0
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664
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Comment: Comment: copy number variation and aneuploidy
2.9 years ago by German.M.Demidov ★ 2.9k
1
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1
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1.5k
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Comment: Comment: what does very low estimates but a significant P value mean.
2.9 years ago by German.M.Demidov ★ 2.9k
1
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0
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1.5k
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Comment: Comment: what does very low estimates but a significant P value mean.
2.9 years ago by German.M.Demidov ★ 2.9k
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1
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843
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Comment: Comment: Is WGS reliable for larges indels and duplication?
2.9 years ago by German.M.Demidov ★ 2.9k
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577
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Comment: Comment: What can you detect with PE150bp shotgun sequencing with 100X depth
2.9 years ago by German.M.Demidov ★ 2.9k
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1.1k
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Comment: Comment: Count the numfer of reads supporting a pattern from a BAM file
2.9 years ago by German.M.Demidov ★ 2.9k
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969
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Comment: Comment: Check all pathogenics variants
2.9 years ago by German.M.Demidov ★ 2.9k
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0
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843
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Comment: Comment: Is WGS reliable for larges indels and duplication?
2.9 years ago by German.M.Demidov ★ 2.9k
1
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0
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631
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Comment: Comment: Can we detect anapleuoids with sequencing (WGS 30X)?
2.9 years ago by German.M.Demidov ★ 2.9k
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1
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2.6k
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Comment: Comment: Regression assumptions - fitted and residual plots
2.9 years ago by German.M.Demidov ★ 2.9k
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0
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1.3k
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Comment: Comment: KING relatedness inference working way too long...
2.9 years ago by German.M.Demidov ★ 2.9k
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2
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1.3k
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KING relatedness inference working way too long...
large-cohort
2.9 years ago by German.M.Demidov ★ 2.9k
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0
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947
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Comment: Comment: how to properly run TrioCNV for trios CNV detection
2.9 years ago by German.M.Demidov ★ 2.9k
1
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1
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947
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Comment: Comment: how to properly run TrioCNV for trios CNV detection
2.9 years ago by German.M.Demidov ★ 2.9k
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0
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499
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Answer: Answer: Simple question about deleted genes in TCGA CNV level 3 data
2.9 years ago by German.M.Demidov ★ 2.9k
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2.2k
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Comment: Comment: [CONCEPTUAL] Mutant analysis - should the t-test be paired or unpaired?
2.9 years ago by German.M.Demidov ★ 2.9k
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1
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2.2k
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Comment: Comment: [CONCEPTUAL] Mutant analysis - should the t-test be paired or unpaired?
2.9 years ago by German.M.Demidov ★ 2.9k
1
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0
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1.7k
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Comment: Comment: Cons of Smith-Waterman Alignment
2.9 years ago by German.M.Demidov ★ 2.9k
1
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1
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1.7k
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Comment: Comment: Cons of Smith-Waterman Alignment
2.9 years ago by German.M.Demidov ★ 2.9k
1
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1
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1.7k
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Answer: Answer: Cons of Smith-Waterman Alignment
2.9 years ago by German.M.Demidov ★ 2.9k
1
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1
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869
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Comment: Comment: Looking for COVID-19 patient sample FastQ/VCF files
2.9 years ago by German.M.Demidov ★ 2.9k
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0
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2.6k
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Comment: Comment: Regression assumptions - fitted and residual plots
2.9 years ago by German.M.Demidov ★ 2.9k
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0
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1.8k
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Comment: Comment: Bioinformatics internship in Europe
2.9 years ago by German.M.Demidov ★ 2.9k
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0
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1.8k
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Comment: Comment: Genetic Variants in NGS analysis
2.9 years ago by German.M.Demidov ★ 2.9k
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1
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1.8k
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Answer: Answer: Genetic Variants in NGS analysis
2.9 years ago by German.M.Demidov ★ 2.9k
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0
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1.0k
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Comment: Comment: How do commercially NIPT tests work?
2.9 years ago by German.M.Demidov ★ 2.9k
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1
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1.1k
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Comment: Comment: What is the advantage of having BAM files per sample compared to one BAM file co
2.9 years ago by German.M.Demidov ★ 2.9k
1
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1
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1.1k
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Comment: Comment: What is the advantage of having BAM files per sample compared to one BAM file co
2.9 years ago by German.M.Demidov ★ 2.9k
3
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0
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2.6k
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Answer: Answer: Deseq same padj values for a lot of genes but with different p-values
3.0 years ago by German.M.Demidov ★ 2.9k
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0
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1.5k
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Comment: Comment: EQTL FDR vs raw p-value
3.0 years ago by German.M.Demidov ★ 2.9k
0
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0
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1.5k
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Comment: Comment: EQTL FDR vs raw p-value
3.0 years ago by German.M.Demidov ★ 2.9k
1
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0
replies
1.5k
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Comment: Comment: EQTL FDR vs raw p-value
3.0 years ago by German.M.Demidov ★ 2.9k
0
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0
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1.3k
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Comment: Comment: Need suggestions to combine the missense variants pathogenicity prediction score
3.0 years ago by German.M.Demidov ★ 2.9k
1
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1
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1.3k
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Answer: Answer: Need suggestions to combine the missense variants pathogenicity prediction score
3.0 years ago by German.M.Demidov ★ 2.9k
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0
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656
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Comment: Comment: What determine if a panel can be used for copy number analysis?
3.0 years ago by German.M.Demidov ★ 2.9k
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0
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979
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Comment: Comment: Hierarchical clustering using GISTIC 2.0 result
3.0 years ago by German.M.Demidov ★ 2.9k
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0
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2.2k
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Comment: Comment: How do I interpret a 200bp reduction of coverage in a gene exon?
3.0 years ago by German.M.Demidov ★ 2.9k
2
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0
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1.8k
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Comment: Comment: Starting a collective twitter account "Bioinformatician Underhood"
3.0 years ago by German.M.Demidov ★ 2.9k
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0
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1.8k
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Comment: Comment: Starting a collective twitter account "Bioinformatician Underhood"
3.0 years ago by German.M.Demidov ★ 2.9k
0
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1
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1.8k
views
Comment: Comment: Starting a collective twitter account "Bioinformatician Underhood"
3.0 years ago by German.M.Demidov ★ 2.9k
0
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0
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1.8k
views
Comment: Comment: Starting a collective twitter account "Bioinformatician Underhood"
3.0 years ago by German.M.Demidov ★ 2.9k
661 results • Page 4 of 14
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