Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
1
vote
0
replies
724
views
Best Practices for CRAM <-> BAM
sambamba bam cram samtools
updated 12 months ago by 141k • written 12 months ago by ▴ 90
0
votes
0
replies
1.2k
views
Comment: Comment: Concatenating 4 files into 1
15 months ago by DavidStreid ▴ 90
0
votes
0
replies
1.2k
views
Comment: Comment: Concatenating 4 files into 1
15 months ago by DavidStreid ▴ 90
1
vote
1
reply
1.2k
views
Answer: Answer: Concatenating 4 files into 1
15 months ago by DavidStreid ▴ 90
0
votes
0
replies
1.0k
views
Comment: Comment: HaplotypeCaller: GVCF-Mode or VCF for variant calling of single sample?
15 months ago by DavidStreid ▴ 90
4
votes
3
replies
1.0k
views
HaplotypeCaller: GVCF-Mode or VCF for variant calling of single sample?
haplotypecaller vcf gatk gvcf
15 months ago by DavidStreid ▴ 90
1
vote
1
reply
9.1k
views
Comment: Comment: Laptops for bioinformatics
17 months ago by DavidStreid ▴ 90
0
votes
0
replies
3.4k
views
Comment: Comment: Right Align Variants
17 months ago by DavidStreid ▴ 90
0
votes
0
replies
32k
views
Comment: Comment: Sort VCF File by Position?
20 months ago by DavidStreid ▴ 90
1
vote
2
replies
32k
views
Comment: Comment: Sort VCF File by Position?
20 months ago by DavidStreid ▴ 90
0
votes
0
replies
676
views
Comment: Comment: Easiest way to run BLAST, specifically blastn, against multiple databases
23 months ago by DavidStreid ▴ 90
2
votes
2
replies
676
views
Easiest way to run BLAST, specifically blastn, against multiple databases
blast blastn
23 months ago by DavidStreid ▴ 90
0
votes
0
replies
1.4k
views
Comment: Comment: Cannot read non-existent file: when executing MarkDuplicates in a script
2.1 years ago by DavidStreid ▴ 90
0
votes
1
reply
1.4k
views
Comment: Comment: Cannot read non-existent file: when executing MarkDuplicates in a script
2.1 years ago by DavidStreid ▴ 90
0
votes
0
replies
1.4k
views
Comment: Comment: Handling large genome size in BLAST+
2.1 years ago by DavidStreid ▴ 90
0
votes
1
reply
1.4k
views
Comment: Comment: Handling large genome size in BLAST+
2.1 years ago by DavidStreid ▴ 90
1
vote
1
reply
1.4k
views
Comment: Comment: Handling large genome size in BLAST+
2.1 years ago by DavidStreid ▴ 90
2
votes
1
reply
1.4k
views
Comment: Comment: Handling large genome size in BLAST+
2.1 years ago by DavidStreid ▴ 90
0
votes
0
replies
27k
views
Comment: Comment: Help interpreting BLAST results? (Max score/Percent. Identity/E-values)
2.2 years ago by DavidStreid ▴ 90
1
vote
0
replies
18k
views
Comment: Comment: Regarding Split reads and discordant reads
2.4 years ago by DavidStreid ▴ 90
0
votes
0
replies
588
views
Converting Genome Reference Consortium to UCSC, i.e. GRCh* -> hg*
GRCh37 GRCh38 Liftover hg38 hg19
2.4 years ago by DavidStreid ▴ 90
0
votes
0
replies
3.6k
views
Answer: Answer: Can Base Pair Positions Change Between Patches Of Builds? (Say Between Grch37.P5
2.4 years ago by DavidStreid ▴ 90
0
votes
0
replies
1.8k
views
Comment: Comment: Troubleshooting Tips - bcl2fastq creates duplicate reads
2.6 years ago by DavidStreid ▴ 90
0
votes
1
reply
1.8k
views
Comment: Comment: Troubleshooting Tips - bcl2fastq creates duplicate reads
2.6 years ago by DavidStreid ▴ 90
0
votes
1
reply
1.8k
views
Comment: Comment: Troubleshooting Tips - bcl2fastq creates duplicate reads
2.6 years ago by DavidStreid ▴ 90
0
votes
1
reply
1.8k
views
Comment: Comment: Troubleshooting Tips - bcl2fastq creates duplicate reads
2.6 years ago by DavidStreid ▴ 90
4
votes
8
replies
1.8k
views
Forum: Troubleshooting Tips - bcl2fastq creates duplicate reads
bcl2fastq duplicates readgroup demultiplex
2.6 years ago by DavidStreid ▴ 90
0
votes
0
replies
1.8k
views
Comment: Comment: Liftover vcf file from hs37d5 assembly to b37 assembly
2.6 years ago by DavidStreid ▴ 90
0
votes
0
replies
14k
views
Comment: Comment: What is the difference between GRCh37 and hs37? And hg19?
2.7 years ago by DavidStreid ▴ 90
0
votes
1
reply
2.8k
views
Comment: C: BCL2FASTQ Dual-Index Barcode Collisions - Is the i5 Index not considered when de
3.1 years ago by DavidStreid ▴ 90
0
votes
3
replies
2.8k
views
BCL2FASTQ Dual-Index Barcode Collisions - Is the i5 Index not considered when determining the number of mismatches?
bcl2fastq barcode collision barcode-mismatches
updated 3.1 years ago by 141k • written 3.1 years ago by ▴ 90
0
votes
1
reply
2.4k
views
Answer: A: GATK CalculateContamination - zeros in output
3.4 years ago by DavidStreid ▴ 90
0
votes
0
replies
10k
views
Answer: A: What Is Best Current Dna Compression Algorithm?
4.7 years ago by DavidStreid ▴ 90
0
votes
2
replies
1.9k
views
Google Cloud - VCF Creation Support from .bam
Bam vcf google cloud google genomic
6.8 years ago by DavidStreid ▴ 90
2
votes
4
replies
1.6k
views
Solutions for genomic dataset storage?
genome sequence storage cloud
updated 6.9 years ago by 13k • written 6.9 years ago by ▴ 90
35 results • Page 1 of 1
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6