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Best Practices for CRAM <-> BAM
sambamba
bam
cram
samtools
updated 12 months ago by
GenoMax
142k • written 12 months ago by
DavidStreid
▴ 90
4
votes
3
replies
1.0k
views
HaplotypeCaller: GVCF-Mode or VCF for variant calling of single sample?
haplotypecaller
vcf
gatk
gvcf
16 months ago by
DavidStreid
▴ 90
2
votes
2
replies
692
views
Easiest way to run BLAST, specifically blastn, against multiple databases
blast
blastn
24 months ago by
DavidStreid
▴ 90
0
votes
0
replies
594
views
Converting Genome Reference Consortium to UCSC, i.e. GRCh* -> hg*
GRCh37
GRCh38
Liftover
hg38
hg19
2.4 years ago by
DavidStreid
▴ 90
0
votes
3
replies
2.8k
views
BCL2FASTQ Dual-Index Barcode Collisions - Is the i5 Index not considered when determining the number of mismatches?
bcl2fastq
barcode collision
barcode-mismatches
updated 3.1 years ago by
GenoMax
142k • written 3.1 years ago by
DavidStreid
▴ 90
0
votes
2
replies
1.9k
views
Google Cloud - VCF Creation Support from .bam
Bam
vcf
google
cloud
google genomic
6.9 years ago by
DavidStreid
▴ 90
2
votes
4
replies
1.6k
views
Solutions for genomic dataset storage?
genome
sequence
storage
cloud
updated 7.0 years ago by
igor
13k • written 7.0 years ago by
DavidStreid
▴ 90
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