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0
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Help with Hmmscan
hmmer alignment blast metagenome hmmscan
4.7 years ago by Longshotx ▴ 70
1
vote
7
replies
1.5k
views
Using blast or similar tool to annotate ORFs using Bacmet database
alignment annotation prodigal metagenome
updated 4.7 years ago by ★ 27k • written 4.7 years ago by ▴ 70
0
votes
0
replies
800
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Trying to find best way to determine co-occurence between taxa and genes related to antibiotic resistance.
statistics co-occurence R cytoscape
4.7 years ago by Longshotx ▴ 70
1
vote
2
replies
1.1k
views
Predicted Proteins: Mapping Reads to ORFs
prodigal mapping coverage counts Assembly
updated 4.7 years ago by 6.4k • written 4.7 years ago by ▴ 70
25
votes
14
replies
14k
views
11 follow
How to run several one-way ANOVAs in R using on different categories?
R gene statistics anova
updated 2.3 years ago by • 0 • written 4.9 years ago by ▴ 70
1
vote
3
replies
1.8k
views
Bulk quality interleaving with bbmap reformat command
bbmap bbduk reformat bash loop
updated 5.2 years ago by ▴ 10 • written 5.4 years ago by ▴ 70
5
votes
14
replies
4.1k
views
Help extracting the taxonomy for a file containing a list of accession numbers from Genbank
sequence gene taxonomy parsing
updated 7.1 years ago by ▴ 10 • written 8.2 years ago by ▴ 70
7
votes
14
replies
3.3k
views
What is the fastest way to add 'Ns' to variable length sequences in a .fasta such that they have the same length
sequencing fasta python biopython
updated 7.2 years ago by ★ 2.8k • written 7.2 years ago by ▴ 70
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