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Answer: A: Determinig the number of hidden states in a Hidden Markov Model
8.7 years ago by Sinji ★ 3.2k
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Comment: C: Enrichment Test between Genomic and Epigenomic Regions
8.7 years ago by Sinji ★ 3.2k
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Answer: A: The best way to correlate some genome wide signal to histone modification signal
8.7 years ago by Sinji ★ 3.2k
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1.7k
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Answer: A: To find the correct paramter
8.8 years ago by Sinji ★ 3.2k
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7.2k
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Comment: C: nucleosome positioning using ATAC-seq
8.8 years ago by Sinji ★ 3.2k
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7.2k
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Comment: C: nucleosome positioning using ATAC-seq
8.8 years ago by Sinji ★ 3.2k
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Comment: C: error in macs2 usage
8.8 years ago by Sinji ★ 3.2k
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7.4k
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Answer: A: Example of how bioinformaticians can publish in nature using publicly available
8.8 years ago by Sinji ★ 3.2k
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2.7k
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Comment: C: Motif prediction with MEME
8.8 years ago by Sinji ★ 3.2k
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7.2k
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Comment: C: problems with macs2 installation
8.9 years ago by Sinji ★ 3.2k
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Answer: A: RNAseq read depth
8.9 years ago by Sinji ★ 3.2k
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2.1k
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Comment: C: Methylation profiling
8.9 years ago by Sinji ★ 3.2k
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3.4k
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Comment: C: update unknown enteries in bed with gene names
9.0 years ago by Sinji ★ 3.2k
1
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1
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3.4k
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Comment: C: update unknown enteries in bed with gene names
9.0 years ago by Sinji ★ 3.2k
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5.1k
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Comment: C: ATAC Mapping rate
9.0 years ago by Sinji ★ 3.2k
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1.8k
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Comment: C: How to make a RNA-seq pipeline universal?
9.0 years ago by Sinji ★ 3.2k
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1.8k
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Comment: C: How to make a RNA-seq pipeline universal?
9.0 years ago by Sinji ★ 3.2k
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1.8k
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How to make a RNA-seq pipeline universal?
RNA-Seq
9.0 years ago by Sinji ★ 3.2k
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Comment: C: possible to aquire genomic region data in rows and columns format for machine le
9.0 years ago by Sinji ★ 3.2k
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2.5k
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Answer: A: Has anyone had experience with Q for ChIP-seq peak calling?
9.0 years ago by Sinji ★ 3.2k
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1.9k
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Tool: CIPHER: A broad genomics sequencing pipeline built on Nextflow
ChIP-Seq RNA-Seq MNase-seq cipher
updated 2.3 years ago by 45k • written 9.1 years ago by ★ 3.2k
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Comment: C: Can one emphasize identity matches with MEME a la perc_identity with BLAST?
9.0 years ago by Sinji ★ 3.2k
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4.7k
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Answer: A: macs2 callpeaks genome
9.0 years ago by Sinji ★ 3.2k
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5.7k
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Comment: C: Biostars question catagories
9.0 years ago by Sinji ★ 3.2k
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3.0k
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Comment: C: Chipseq sample or test data
9.1 years ago by Sinji ★ 3.2k
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1
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5.6k
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Comment: C: How to keep information from both files when I intersect them?
9.1 years ago by Sinji ★ 3.2k
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5.6k
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Comment: C: How to keep information from both files when I intersect them?
9.1 years ago by Sinji ★ 3.2k
8
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10
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5.6k
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How to keep information from both files when I intersect them?
bedops
updated 9.1 years ago by ▴ 200 • written 9.1 years ago by ★ 3.2k
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5.6k
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Comment: C: How to keep information from both files when I intersect them?
9.1 years ago by Sinji ★ 3.2k
1
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1
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10.0k
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Answer: A: EaSeq - Interactive ChIP-seq analysis and visualization (for Windows)
9.1 years ago by Sinji ★ 3.2k
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2.6k
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Comment: C: Nucleosome Peak Callers
9.1 years ago by Sinji ★ 3.2k
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1
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2.6k
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Comment: C: Nucleosome Peak Callers
9.1 years ago by Sinji ★ 3.2k
2
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5
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2.6k
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Nucleosome Peak Callers
mnase peak callers danpos2 inps
updated 9.1 years ago by 9.0k • written 9.1 years ago by ★ 3.2k
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4.4k
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Comment: C: RNA-Seq without replicate using Kallisto
9.1 years ago by Sinji ★ 3.2k
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3.1k
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Comment: C: run softwares tophat
9.1 years ago by Sinji ★ 3.2k
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13k
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Comment: C: Best databases for Chip-Seq
9.1 years ago by Sinji ★ 3.2k
3
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1.8k
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Answer: A: Is there a different gene id(e.g symbol name) for a gene's exon , a gene's intro
9.1 years ago by Sinji ★ 3.2k
0
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1
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4.3k
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Comment: C: ENCODE ChIP-Seq Control Experiments
9.1 years ago by Sinji ★ 3.2k
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3.8k
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Comment: C: Issues on native bash on Windows 10
9.1 years ago by Sinji ★ 3.2k
1
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3.9k
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Comment: C: different BED Format for peak calling
9.1 years ago by Sinji ★ 3.2k
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4.9k
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Answer: A: Peak Calling with MACS, Analysis with DiffBind, Dario Rerio!
9.1 years ago by Sinji ★ 3.2k
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2.3k
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Comment: C: Error when using Bedtools for sorting files
9.1 years ago by Sinji ★ 3.2k
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3.8k
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Answer: A: DiffBind installation error in R & Rstudio?
9.1 years ago by Sinji ★ 3.2k
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2.0k
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Comment: C: Length of reads in a RNAseq experiment
9.1 years ago by Sinji ★ 3.2k
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2.8k
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Comment: C: How run MACS2 with Pan Troglodytes (Chimp) genome?
9.1 years ago by Sinji ★ 3.2k
0
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1
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2.2k
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Comment: C: A tale of two heatmap function
9.1 years ago by Sinji ★ 3.2k
1
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3.1k
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Answer: A: Why Gencode GTF and UCSC table browser.bed for all exons have different exon ann
9.1 years ago by Sinji ★ 3.2k
1
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1
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5.7k
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Comment: C: H3K4me3 and H3K27ac double peaks near TSS
9.1 years ago by Sinji ★ 3.2k
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1
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4.4k
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Comment: C: Computer specification for analysing NGS data
9.1 years ago by Sinji ★ 3.2k
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1
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9.6k
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Comment: C: ENCODE ATAC-seq pipeline peak calling
9.1 years ago by Sinji ★ 3.2k
197 results • Page 2 of 4
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