Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
0
replies
644
views
Comment: Comment: Genotypes in vcf files
2.2 years ago by liorglic ★ 1.4k
0
votes
0
replies
2.6k
views
Answer: Answer: FastQC for paired end data
2.3 years ago by liorglic ★ 1.4k
1
vote
1
reply
1.3k
views
Comment: Comment: Filter isoforms before or after genome annotation
2.3 years ago by liorglic ★ 1.4k
0
votes
1
reply
1.2k
views
Comment: Comment: Plant de novo genome assembly of illumina reads on linux
2.3 years ago by liorglic ★ 1.4k
1
vote
2
replies
1.2k
views
Answer: Answer: Plant de novo genome assembly of illumina reads on linux
2.3 years ago by liorglic ★ 1.4k
1
vote
1
reply
1.3k
views
Comment: Comment: Filter isoforms before or after genome annotation
2.3 years ago by liorglic ★ 1.4k
0
votes
0
replies
754
views
Comment: Comment: Is there any way to determine if a gene is due to contamination?
2.3 years ago by liorglic ★ 1.4k
0
votes
0
replies
4.3k
views
Comment: Comment: Trouble with bedtools getfasta
2.3 years ago by liorglic ★ 1.4k
0
votes
1
reply
4.3k
views
Comment: Comment: Trouble with bedtools getfasta
2.3 years ago by liorglic ★ 1.4k
0
votes
1
reply
4.3k
views
Comment: Comment: Trouble with bedtools getfasta
updated 2.3 years ago by 43k • written 2.3 years ago by ★ 1.4k
0
votes
0
replies
1.7k
views
Answer: Answer: Re-assembly assembled genomes
2.3 years ago by liorglic ★ 1.4k
0
votes
1
reply
854
views
Comment: Comment: Bam in python
2.3 years ago by liorglic ★ 1.4k
1
vote
1
reply
854
views
Answer: Answer: Bam in python
2.3 years ago by liorglic ★ 1.4k
1
vote
2
replies
631
views
NGS sequencing depth notation
NGS depth
updated 2.3 years ago by 100k • written 2.3 years ago by ★ 1.4k
3
votes
1
reply
1.5k
views
Answer: Answer: Using snakemake to download split-reads by SRA number
2.3 years ago by liorglic ★ 1.4k
2
votes
1
reply
747
views
Answer: Answer: Why should we remove recombinant regions when we construct phylogenetic tree?
2.3 years ago by liorglic ★ 1.4k
0
votes
0
replies
428
views
Comment: Comment: Incorporate SNP/Indel and generate new sequence from original reference gene seq
2.3 years ago by liorglic ★ 1.4k
3
votes
1
reply
964
views
Answer: Answer: Can I execute a snakemake rule only once?
2.3 years ago by liorglic ★ 1.4k
0
votes
1
reply
541
views
Comment: Comment: studying similarity
2.3 years ago by liorglic ★ 1.4k
3
votes
0
replies
548
views
Answer: Answer: SeqIO object get cleared away after being accessed
2.3 years ago by liorglic ★ 1.4k
1
vote
0
replies
1.2k
views
Comment: Comment: How can I extract part of the DNA sequences that align to a specific region in t
2.3 years ago by liorglic ★ 1.4k
0
votes
1
reply
1.1k
views
Comment: Comment: How is genome coverage / depth is determined?
2.3 years ago by liorglic ★ 1.4k
1
vote
2
replies
1.1k
views
Comment: Comment: How is genome coverage / depth is determined?
2.3 years ago by liorglic ★ 1.4k
1
vote
0
replies
2.6k
views
Answer: Answer: Fastest way to parse through a fasta file in python
2.3 years ago by liorglic ★ 1.4k
1
vote
1
reply
1.4k
views
Comment: Comment: Merging two sets of NGS reads
2.3 years ago by liorglic ★ 1.4k
0
votes
0
replies
1.6k
views
Comment: Comment: Unsupervised hierarchical clustering of DEG in Rstudio
2.3 years ago by liorglic ★ 1.4k
0
votes
0
replies
798
views
Comment: Comment: String values replace in python data frame
2.3 years ago by liorglic ★ 1.4k
0
votes
1
reply
1.4k
views
Comment: Comment: Merging two sets of NGS reads
2.3 years ago by liorglic ★ 1.4k
0
votes
1
reply
1.6k
views
Comment: Comment: Unsupervised hierarchical clustering of DEG in Rstudio
2.3 years ago by liorglic ★ 1.4k
0
votes
0
replies
526
views
Answer: Answer: How to determine the best assembly with number of N in the sequence and how to f
2.3 years ago by liorglic ★ 1.4k
0
votes
1
reply
1.6k
views
Comment: Comment: Unsupervised hierarchical clustering of DEG in Rstudio
2.3 years ago by liorglic ★ 1.4k
0
votes
0
replies
868
views
Comment: Comment: Iso-seq mapping and annotation
2.3 years ago by liorglic ★ 1.4k
0
votes
0
replies
658
views
Answer: Answer: Does it necessary to use both forward and reverse fastq input files in kmergnie?
2.3 years ago by liorglic ★ 1.4k
0
votes
0
replies
794
views
Answer: Answer: How extract a specific part of sequence from a gtf file?
2.3 years ago by liorglic ★ 1.4k
1
vote
0
replies
607
views
Answer: Answer: [Beginner] Whole Genome Sequence Assembly: Where do I start?
2.3 years ago by liorglic ★ 1.4k
0
votes
0
replies
827
views
Comment: Comment: how to discover the dissimilar regions in alignment using pyhton?
2.3 years ago by liorglic ★ 1.4k
1
vote
0
replies
845
views
Answer: Answer: How to not align reverse complementary reads?
2.3 years ago by liorglic ★ 1.4k
0
votes
1
reply
1.6k
views
Comment: Comment: How to solve Non-unique top level ID error in Maker annotation pipeline ?
2.3 years ago by liorglic ★ 1.4k
1
vote
0
replies
14k
views
Answer: Answer: How to get FASTQ reads from the Short Read Archive (SRA)
2.3 years ago by liorglic ★ 1.4k
0
votes
0
replies
877
views
Comment: Comment: Paired-end reads
2.3 years ago by liorglic ★ 1.4k
1
vote
3
replies
995
views
Clumpify on multiple files
dedupe clumpify fastq
2.3 years ago by liorglic ★ 1.4k
1
vote
0
replies
995
views
Answer: Answer: Clumpify on multiple files
2.3 years ago by liorglic ★ 1.4k
1
vote
0
replies
4.7k
views
Comment: Comment: It seems that 'fastuniq' does not support fq.gz files. How to solve this except
2.3 years ago by liorglic ★ 1.4k
0
votes
0
replies
995
views
Comment: Comment: Clumpify on multiple files
2.3 years ago by liorglic ★ 1.4k
2
votes
1
reply
926
views
Answer: Answer: Do I need to trim the reads on samples with <0.2% adapter content?
2.3 years ago by liorglic ★ 1.4k
0
votes
1
reply
1.1k
views
Answer: Answer: Read multiple VCF files through PyVCF
2.3 years ago by liorglic ★ 1.4k
0
votes
1
reply
779
views
Comment: Comment: Data sets of WGS + disease phenotypes?
2.3 years ago by liorglic ★ 1.4k
1
vote
3
replies
779
views
Data sets of WGS + disease phenotypes?
wgs phenotype
updated 2.3 years ago by ▴ 190 • written 2.4 years ago by ★ 1.4k
1
vote
1
reply
830
views
Answer: Answer: 50% Missed exons when trying to replicate annotation reference
2.3 years ago by liorglic ★ 1.4k
1
vote
1
reply
1.3k
views
Answer: Answer: Best practice for RNA-Seq aligned sequences data for visualization via IGV
2.4 years ago by liorglic ★ 1.4k
282 results • Page 3 of 6
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6