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Answer:
Answer: Differential analysis of enrichment results
15 months ago by
BioinfGuru
★ 2.1k
1
vote
1
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1.8k
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Comment:
Comment: Differential analysis of enrichment results
15 months ago by
BioinfGuru
★ 2.1k
2
votes
2
replies
2.8k
views
Answer:
Answer: Conversion of Gene Name to Ensembl ID
15 months ago by
BioinfGuru
★ 2.1k
2
votes
0
replies
4.4k
views
Comment:
Comment: Running fastqc in parallel
15 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
1.3k
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Comment:
Comment: Pathway analysis for DGEList
15 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
1.3k
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Answer:
Answer: Pathway analysis for DGEList
15 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
418
views
Should I run SVA or not?
Clustering
SVA
Batch
15 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
4.4k
views
Comment:
Comment: Running fastqc in parallel
15 months ago by
BioinfGuru
★ 2.1k
2
votes
0
replies
720
views
Answer:
Answer: Associations with small-ish patient clinical data with bulk RNA-seq expression
16 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
1.1k
views
Comment:
Comment: Comparing two RNAseq runs for the same samples
16 months ago by
BioinfGuru
★ 2.1k
3
votes
2
replies
4.4k
views
Answer:
Answer: Running fastqc in parallel
15 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
672
views
Comment:
Comment: What does evidence of batch effect in bulk rnaseq look like?
16 months ago by
BioinfGuru
★ 2.1k
2
votes
2
replies
672
views
What does evidence of batch effect in bulk rnaseq look like?
batches
sva
surrogates
16 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
1.8k
views
Comment:
Comment: Tissue-specific DEG analysis with DEseq2
17 months ago by
BioinfGuru
★ 2.1k
1
vote
0
replies
2.3k
views
Comment:
Comment: how to combine multiple RNAseq count files into a single dataframe in R and unix
18 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
2.3k
views
Comment:
Comment: how to combine multiple RNAseq count files into a single dataframe in R and unix
18 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
9.2k
views
Comment:
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
18 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
9.2k
views
Comment:
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
18 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
9.2k
views
Comment:
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
18 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
9.2k
views
Comment:
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
18 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
9.2k
views
Comment:
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
18 months ago by
BioinfGuru
★ 2.1k
0
votes
2
replies
9.2k
views
Comment:
Comment: Installing/switching between versions of R/Rstudio/Bioconductor
18 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
1.7k
views
Comment:
Comment: RNA seq differential expression analysis
18 months ago by
BioinfGuru
★ 2.1k
9
votes
13
replies
9.2k
views
Tutorial:
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
R
Ubuntu
Linux
Bioconductor
Rstudio
updated 18 months ago by
ATpoint
89k • written 18 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
2.5k
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Comment:
Comment: DEG analysis of RNA-seq data across multiple tissues and two conditions
18 months ago by
BioinfGuru
★ 2.1k
5
votes
4
replies
2.5k
views
DEG analysis of RNA-seq data across multiple tissues and two conditions
RNA-seq
EdgeR
DEGs
DESeq2
18 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
2.5k
views
Comment:
Comment: DEG analysis of RNA-seq data across multiple tissues and two conditions
18 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
2.3k
views
Comment:
Comment: RNAseq of primary tumor and metastases in two different organ
18 months ago by
BioinfGuru
★ 2.1k
1
vote
0
replies
2.3k
views
Comment:
Comment: RNAseq of primary tumor and metastases in two different organ
18 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
830
views
Answer:
Answer: gene body coverage with RSeqQC
18 months ago by
BioinfGuru
★ 2.1k
2
votes
0
replies
903
views
Comment:
Comment: Bioinformatics_where do i start
18 months ago by
BioinfGuru
★ 2.1k
1
vote
1
reply
2.3k
views
Comment:
Comment: RNAseq of primary tumor and metastases in two different organ
18 months ago by
BioinfGuru
★ 2.1k
1
vote
1
reply
2.3k
views
Comment:
Comment: RNAseq of primary tumor and metastases in two different organ
18 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
2.3k
views
Comment:
Comment: RNAseq of primary tumor and metastases in two different organ
18 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
1.2k
views
Comment:
Comment: what is the normal range of htseq-count output for homo sapiens RNA-Seq
18 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
1.7k
views
Comment:
Comment: Help with summarizeOverlaps function in RNASeq analysis using R
19 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
1.7k
views
Comment:
Comment: Help with summarizeOverlaps function in RNASeq analysis using R
19 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
1.0k
views
Comment:
Comment: Removing batch effect using combat-seq
19 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
1.0k
views
Comment:
Comment: Removing batch effect using combat-seq
19 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
1.7k
views
Comment:
Comment: Help with summarizeOverlaps function in RNASeq analysis using R
19 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
1.7k
views
Comment:
Comment: Help with summarizeOverlaps function in RNASeq analysis using R
19 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
914
views
Answer:
Answer: Tissue specific mRNA expression dataset in human and mouse
19 months ago by
BioinfGuru
★ 2.1k
2
votes
1
reply
3.1k
views
Answer:
Answer: Mapping ortholog human and mouse transcript
19 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
939
views
Comment:
Comment: How do I get the gene annotations as a text file from a genebank file?
19 months ago by
BioinfGuru
★ 2.1k
0
votes
2
replies
2.8k
views
Comment:
Comment: What is the sequence origin in human plasma?
19 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
680
views
Comment:
Comment: PCA script correction
19 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
1.7k
views
Comment:
Comment: Searching for gene in multiple genomes
19 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
2.8k
views
Comment:
Comment: What is the sequence origin in human plasma?
19 months ago by
BioinfGuru
★ 2.1k
1
vote
1
reply
1.7k
views
Answer:
Answer: Searching for gene in multiple genomes
19 months ago by
BioinfGuru
★ 2.1k
1
vote
1
reply
3.3k
views
Answer:
Answer: cutadapt not trimming all adapters in PE Illumina sequencing
19 months ago by
BioinfGuru
★ 2.1k
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