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Comment: C: Number of SNPs in VCF
6.8 years ago by dyollluap ▴ 310
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4.1k
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Answer: A: Number of SNPs in VCF
6.8 years ago by dyollluap ▴ 310
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2.2k
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Answer: A: alignment used for CCLE RNA-seq
6.9 years ago by dyollluap ▴ 310
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6.3k
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Comment: C: VEP and Annovar Annotation
7.2 years ago by dyollluap ▴ 310
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6.3k
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Comment: C: VEP and Annovar Annotation
7.2 years ago by dyollluap ▴ 310
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1.7k
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Comment: C: Miseq Genomic DNA analysis
7.2 years ago by dyollluap ▴ 310
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1.3k
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Answer: A: esiRNA sequences in Drosophila
7.2 years ago by dyollluap ▴ 310
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3.3k
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Answer: A: IGV error: Error loading SAM header: For sequence 34711, text and binary have di
7.2 years ago by dyollluap ▴ 310
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1.5k
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Answer: A: Is the database, 'Yeast Nucleosome Atlas (YNA)', reliable?
7.2 years ago by dyollluap ▴ 310
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1.6k
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Answer: A: which annotation to use and is it advisable to use bam to fastq
7.2 years ago by dyollluap ▴ 310
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1.4k
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Answer: A: Low-quality datasets for QC purposes?
7.3 years ago by dyollluap ▴ 310
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2.5k
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Comment: C: A circos problem
7.4 years ago by dyollluap ▴ 310
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2.6k
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Comment: C: TCGA barcode dictionary
7.4 years ago by dyollluap ▴ 310
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2.6k
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Answer: A: TCGA barcode dictionary
7.4 years ago by dyollluap ▴ 310
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3.6k
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any recommended tools for batch effect and normalization not written in R?
R RNA-Seq combat python batch-effect
updated 5 months ago by 44k • written 7.5 years ago by ▴ 310
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Comment: C: Updated R version to 3.3.3 and now I can not download from source("http://biocon
7.5 years ago by dyollluap ▴ 310
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Answer: A: HiSeq2500, Whole Genome Resequencing, Paired-ends 101 bp length, but no barcode
7.5 years ago by dyollluap ▴ 310
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3.6k
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Comment: C: any recommended tools for batch effect and normalization not written in R?
7.5 years ago by dyollluap ▴ 310
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2
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15k
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Answer: A: How to find On-Target and Off-Targer percentage of reads?
7.6 years ago by dyollluap ▴ 310
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1
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2.9k
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Comment: C: TCGA barcode for SNP sample
7.6 years ago by dyollluap ▴ 310
3
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4.8k
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Answer: A: where can I find the "code table report" for TCGA barcode?
7.6 years ago by dyollluap ▴ 310
3
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1
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2.9k
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Answer: A: TCGA barcode for SNP sample
7.6 years ago by dyollluap ▴ 310
1
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1
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3.4k
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Answer: A: How to print the lines exclusively from unknown columns with missing(undef) valu
7.7 years ago by dyollluap ▴ 310
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1.7k
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Answer: A: Why are UTRs ommitted in yeast sequence databases?
7.7 years ago by dyollluap ▴ 310
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2.7k
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Answer: A: Yeast 3'UTR sequence fasta file
7.7 years ago by dyollluap ▴ 310
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2
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1.8k
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Answer: A: Same liftover position for different positions
7.7 years ago by dyollluap ▴ 310
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10k
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Comment: C: COSMIC vcf file compatibility for Mutect2
7.7 years ago by dyollluap ▴ 310
2
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3.3k
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Answer: A: variant calling after mapping via bwa mem
7.7 years ago by dyollluap ▴ 310
3
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9.4k
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Answer: A: How to get rs number for the variants list?
7.7 years ago by dyollluap ▴ 310
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1
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3.1k
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Answer: A: How can i mean tags of TCGA (The Cancer Genome Atlas) Database?
7.7 years ago by dyollluap ▴ 310
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5.6k
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Comment: C: QC for Whole Exome Sequence Data
7.7 years ago by dyollluap ▴ 310
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1.9k
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Answer: A: run our pipeline on TCGA data
7.8 years ago by dyollluap ▴ 310
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3
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3.5k
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Answer: A: Help required to write a one liner to gunzip (and retain gzipped files) for mul
updated 7.8 years ago by 47k • written 7.8 years ago by ▴ 310
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1.8k
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Answer: A: purify tumor samples and remove normal cells
7.8 years ago by dyollluap ▴ 310
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2.3k
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Comment: C: How analyse chip-exo paired read data and get BigWig or Peaks called?
7.9 years ago by dyollluap ▴ 310
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2.2k
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Answer: A: Suggestions on Sharing VERY LARGE files?
7.9 years ago by dyollluap ▴ 310
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0
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1.8k
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Answer: A: Genomic Cordinate to HGVS format
7.9 years ago by dyollluap ▴ 310
1
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0
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2.1k
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Answer: A: drug response variant datasets
7.9 years ago by dyollluap ▴ 310
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0
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2.6k
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Answer: A: how to get transcription factors for my gene list
7.9 years ago by dyollluap ▴ 310
1
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1
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1.3k
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Answer: A: Sample description for high-level modEncode data?
8.0 years ago by dyollluap ▴ 310
1
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0
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2.2k
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Answer: A: Computer build for small core lab
8.2 years ago by dyollluap ▴ 310
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