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Comment: Comment: R/python script to extract Subcellular locations (Compartments) from Genecards?
25 days ago by Pierre Lindenbaum 161k
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237
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Comment: Comment: Uniprotkb's Disease & Variants section out-of-date
25 days ago by Pierre Lindenbaum 161k
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188
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Comment: Comment: R/Python script to collect allele frequency for batch of SNPs in gnomAD database
25 days ago by Pierre Lindenbaum 161k
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161
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Comment: Comment: sorted bam file generated from gff transcript fastas, how to get counts with HTs
updated 25 days ago by 43k • written 25 days ago by 161k
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349
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Comment: Comment: samtools filtering
25 days ago by Pierre Lindenbaum 161k
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1
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559
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Comment: Comment: frequency of each variant per sample
25 days ago by Pierre Lindenbaum 161k
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349
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Comment: Comment: samtools filtering
25 days ago by Pierre Lindenbaum 161k
2
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341
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Answer: Answer: Problems with Nextflow to run NanoRtax Pipeline
updated 25 days ago by 6.4k • written 25 days ago by 161k
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213
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Comment: Comment: utr sequence retrieval from UCSC
26 days ago by Pierre Lindenbaum 161k
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271
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Answer: Answer: Multiple iterations of sorted bam output files with picard SortSam
26 days ago by Pierre Lindenbaum 161k
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228
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Answer: Answer: Using nextflow for performing quality control and trimming of reads
27 days ago by Pierre Lindenbaum 161k
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307
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Answer: Answer: I am unsure why my files are not being accepted in bedtools jaccard, any tips?
27 days ago by Pierre Lindenbaum 161k
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355
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Comment: Comment: how to do the repeatability filtering of vcf files?
27 days ago by Pierre Lindenbaum 161k
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1
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355
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Comment: Comment: how to do the repeatability filtering of vcf files?
29 days ago by Pierre Lindenbaum 161k
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316
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Comment: Comment: Adding Clinvar data source to funcotator
29 days ago by Pierre Lindenbaum 161k
1
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292
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Answer: Answer: BioGRID REST - How to retrieve all the protein interactions?
4 weeks ago by Pierre Lindenbaum 161k
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1
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292
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Comment: Comment: BioGRID REST - How to retrieve all the protein interactions?
4 weeks ago by Pierre Lindenbaum 161k
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1
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334
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Comment: Comment: vcf file: number of samples does not match number of columns
4 weeks ago by Pierre Lindenbaum 161k
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1
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1.1k
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Comment: Comment: F*up Night style events for Bioinformatics ? Comment if you're interested!
4 weeks ago by Pierre Lindenbaum 161k
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1.1k
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Answer: Answer: F*up Night style events for Bioinformatics ? Comment if you're interested!
4 weeks ago by Pierre Lindenbaum 161k
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384
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Comment: Comment: calculate mismatch rate from VCF file
4 weeks ago by Pierre Lindenbaum 161k
1
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1
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365
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diffbind : killed dba.count(DBsample, bParallel=FALSE)
diffbind r atacseq
4 weeks ago by Pierre Lindenbaum 161k
1
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365
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Answer: Answer: diffbind : killed dba.count(DBsample, bParallel=FALSE)
4 weeks ago by Pierre Lindenbaum 161k
0
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1
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384
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Comment: Comment: calculate mismatch rate from VCF file
4 weeks ago by Pierre Lindenbaum 161k
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1
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680
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Comment: Comment: Variant calling of GBS data
4 weeks ago by Pierre Lindenbaum 161k
1
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1
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680
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Comment: Comment: Variant calling of GBS data
4 weeks ago by Pierre Lindenbaum 161k
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1
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384
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Answer: Answer: calculate mismatch rate from VCF file
4 weeks ago by Pierre Lindenbaum 161k
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1
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630
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Comment: Comment: Piping samtools to R
4 weeks ago by Pierre Lindenbaum 161k
2
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2
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630
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Comment: Comment: Piping samtools to R
4 weeks ago by Pierre Lindenbaum 161k
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1
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276
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Comment: Comment: A pipeline for prediction and annotation of obelisks
4 weeks ago by Pierre Lindenbaum 161k
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184
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Comment: Comment: dbsnp flanks information
4 weeks ago by Pierre Lindenbaum 161k
1
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1
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680
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Comment: Comment: Variant calling of GBS data
4 weeks ago by Pierre Lindenbaum 161k
1
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0
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290
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Comment: Comment: Extracting information from my VCF file
4 weeks ago by Pierre Lindenbaum 161k
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175
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Comment: Comment: Karytotype color annotations
4 weeks ago by Pierre Lindenbaum 161k
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308
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Comment: Comment: Confirm if a genome position falls into a coding exon
4 weeks ago by Pierre Lindenbaum 161k
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1
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308
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Answer: Answer: Confirm if a genome position falls into a coding exon
5 weeks ago by Pierre Lindenbaum 161k
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407
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Comment: Comment: 0-based coordinates from samtools depth
5 weeks ago by Pierre Lindenbaum 161k
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1
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407
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Comment: Comment: 0-based coordinates from samtools depth
5 weeks ago by Pierre Lindenbaum 161k
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407
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Comment: Comment: 0-based coordinates from samtools depth
5 weeks ago by Pierre Lindenbaum 161k
1
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1
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407
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Answer: Answer: 0-based coordinates from samtools depth
5 weeks ago by Pierre Lindenbaum 161k
3
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2
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680
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Answer: Answer: Variant calling of GBS data
5 weeks ago by Pierre Lindenbaum 161k
1
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0
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269
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Comment: Comment: Reference mouse phased vcf
5 weeks ago by Pierre Lindenbaum 161k
3
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702
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Comment: Comment: How to filter Illumina Nirvana variant annotation?
5 weeks ago by Pierre Lindenbaum 161k
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1
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702
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Comment: Comment: How to filter Illumina Nirvana variant annotation?
5 weeks ago by Pierre Lindenbaum 161k
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702
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Answer: Answer: How to filter Illumina Nirvana variant annotation?
5 weeks ago by Pierre Lindenbaum 161k
0
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390
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Comment: Comment: What is meant by 'genomic order' in gatk's GatherVcfs, and how do I check for it
5 weeks ago by Pierre Lindenbaum 161k
1
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390
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Answer: Answer: What is meant by 'genomic order' in gatk's GatherVcfs, and how do I check for it
5 weeks ago by Pierre Lindenbaum 161k
0
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0
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545
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Comment: Comment: Need help understanding core SNPs
5 weeks ago by Pierre Lindenbaum 161k
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1
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545
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Comment: Comment: Need help understanding core SNPs
5 weeks ago by Pierre Lindenbaum 161k
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0
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442
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Comment: Comment: Losing my mind with a VCF problem
5 weeks ago by Pierre Lindenbaum 161k
12,422 results • Page 3 of 249
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