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1
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Comment:
Comment: Plotting a pvalue threshold for an FDR corrected pvalue <.05 when thats not pres
3 days ago by
dsull
★ 5.1k
5
votes
0
replies
488
views
Comment:
Comment: p-value combination methods
3 days ago by
dsull
★ 5.1k
1
vote
1
reply
330
views
Comment:
Comment: Should SMART-seq2 data be deduplicated in STAR?
5 days ago by
dsull
★ 5.1k
1
vote
1
reply
330
views
Answer:
Answer: Should SMART-seq2 data be deduplicated in STAR?
6 days ago by
dsull
★ 5.1k
1
vote
0
replies
692
views
Comment:
Comment: UMAP or TSNE for single cells?
11 days ago by
dsull
★ 5.1k
1
vote
0
replies
310
views
Comment:
Comment: Can I estimate RNA velocity in Visium Spatial Gene Expression for FFPE
11 days ago by
dsull
★ 5.1k
2
votes
0
replies
692
views
Comment:
Comment: UMAP or TSNE for single cells?
12 days ago by
dsull
★ 5.1k
0
votes
1
reply
392
views
Comment:
Comment: Three questions about datasets
12 days ago by
dsull
★ 5.1k
0
votes
1
reply
392
views
Answer:
Answer: Three questions about datasets
12 days ago by
dsull
★ 5.1k
1
vote
0
replies
375
views
Comment:
Comment: Smart seq3 analysis
14 days ago by
dsull
★ 5.1k
2
votes
1
reply
375
views
Answer:
Answer: Smart seq3 analysis
16 days ago by
dsull
★ 5.1k
0
votes
1
reply
547
views
Comment:
Comment: Mitochondrial genes - TPM calculation bulk RNA-Seq
16 days ago by
dsull
★ 5.1k
1
vote
0
replies
327
views
Comment:
Comment: salmon for gene expression quantification
16 days ago by
dsull
★ 5.1k
1
vote
1
reply
390
views
Answer:
Answer: Quality filtering prior to pseudoalignment
16 days ago by
dsull
★ 5.1k
3
votes
1
reply
403
views
Answer:
Answer: Why am I getting different results with kallisto?
22 days ago by
dsull
★ 5.1k
0
votes
0
replies
628
views
Comment:
Comment: Isaac aligner V4 genome aligner questions
27 days ago by
dsull
★ 5.1k
2
votes
1
reply
541
views
Comment:
Comment: RNA-Seq: Comparing Expression between Cancer Grades
29 days ago by
dsull
★ 5.1k
1
vote
0
replies
379
views
Comment:
Comment: Best way to use k-mers as a predictor in my neural network
4 weeks ago by
dsull
★ 5.1k
1
vote
0
replies
213
views
Answer:
Answer: Intenger encoding versus one-hot encoding for chromosome as a predictor in a neu
5 weeks ago by
dsull
★ 5.1k
0
votes
0
replies
354
views
Comment:
Comment: Queries on Tophat and Cufflinks Data
5 weeks ago by
dsull
★ 5.1k
1
vote
0
replies
247
views
Comment:
Comment: Converting STAR Gene-level alignment to TPM expression
5 weeks ago by
dsull
★ 5.1k
0
votes
1
reply
354
views
Comment:
Comment: Queries on Tophat and Cufflinks Data
5 weeks ago by
dsull
★ 5.1k
1
vote
1
reply
592
views
Answer:
Answer: Best command line tool for downloading sequencing reads
6 weeks ago by
dsull
★ 5.1k
0
votes
1
reply
478
views
Comment:
Comment: How to assign gene names after kallisto when I add GFP?
7 weeks ago by
dsull
★ 5.1k
1
vote
0
replies
347
views
Comment:
Comment: GSEA analysis for phosphoproteins
7 weeks ago by
dsull
★ 5.1k
0
votes
1
reply
347
views
Answer:
Answer: GSEA analysis for phosphoproteins
7 weeks ago by
dsull
★ 5.1k
0
votes
1
reply
536
views
Comment:
Comment: Kallisto abundance.tsv
7 weeks ago by
dsull
★ 5.1k
1
vote
1
reply
478
views
Answer:
Answer: How to assign gene names after kallisto when I add GFP?
8 weeks ago by
dsull
★ 5.1k
0
votes
0
replies
1.6k
views
Comment:
Comment: Unmapped Reads in Kallisto
9 weeks ago by
dsull
★ 5.1k
1
vote
0
replies
1.6k
views
Answer:
Answer: Unmapped Reads in Kallisto
9 weeks ago by
dsull
★ 5.1k
0
votes
1
reply
1.6k
views
Comment:
Comment: Unmapped Reads in Kallisto
9 weeks ago by
dsull
★ 5.1k
1
vote
0
replies
603
views
Comment:
Comment: Frustrated with DEA results
9 weeks ago by
dsull
★ 5.1k
4
votes
0
replies
603
views
Comment:
Comment: Frustrated with DEA results
9 weeks ago by
dsull
★ 5.1k
0
votes
0
replies
660
views
Comment:
Comment: Low Alignment rate
9 weeks ago by
dsull
★ 5.1k
2
votes
2
replies
660
views
Comment:
Comment: Low Alignment rate
9 weeks ago by
dsull
★ 5.1k
1
vote
1
reply
954
views
Comment:
Comment: scRNAseq Differential expression analysis
10 weeks ago by
dsull
★ 5.1k
1
vote
2
replies
954
views
Comment:
Comment: scRNAseq Differential expression analysis
10 weeks ago by
dsull
★ 5.1k
0
votes
0
replies
334
views
Comment:
Comment: High amount of intronic/intergenic reads in SMARTer stranded total bulk RNAseq
10 weeks ago by
dsull
★ 5.1k
3
votes
1
reply
954
views
Comment:
Comment: scRNAseq Differential expression analysis
10 weeks ago by
dsull
★ 5.1k
1
vote
0
replies
575
views
Comment:
Comment: Importance of Data Structures for Bioinformatics?
10 weeks ago by
dsull
★ 5.1k
2
votes
0
replies
616
views
Comment:
Comment: Recommended way to normalize SmartSeq2 gene expression matrix to better match 10
10 weeks ago by
dsull
★ 5.1k
0
votes
1
reply
864
views
Comment:
Comment: RNA-seq for differential gene expression analysis with only one biological repli
11 weeks ago by
dsull
★ 5.1k
1
vote
0
replies
344
views
Comment:
Comment: Which reference genome, DNA or cDNA and why?
3 months ago by
dsull
★ 5.1k
1
vote
0
replies
692
views
Comment:
Comment: Can one sample t.test be used to determine statistical significance for log2FC v
3 months ago by
dsull
★ 5.1k
6
votes
1
reply
3.3k
views
Comment:
Comment: Reproduce the article "The complete sequence of a human genome."
3 months ago by
dsull
★ 5.1k
0
votes
1
reply
692
views
Answer:
Answer: Can one sample t.test be used to determine statistical significance for log2FC v
3 months ago by
dsull
★ 5.1k
0
votes
0
replies
978
views
Answer:
Answer: Is Bioinformatics a Professional Degree?
3 months ago by
dsull
★ 5.1k
2
votes
1
reply
323
views
Answer:
Answer: Is it possible to detect fusion genes by either stranded or unstranded RNA-seq?
3 months ago by
dsull
★ 5.1k
1
vote
0
replies
427
views
Comment:
Comment: Theoretical question about scRNA-seq
3 months ago by
dsull
★ 5.1k
0
votes
1
reply
420
views
Answer:
Answer: Extracting RNA sequence - single cell
3 months ago by
dsull
★ 5.1k
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