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502
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Comment: Comment: Kallisto: to scaledTPM or not to scaledTPM
5 hours ago by dsull ★ 6.8k
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274
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Comment: Comment: Chromium 5’ Next GEM single cell STARsolo
1 day ago by dsull ★ 6.8k
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274
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Answer: Answer: Chromium 5’ Next GEM single cell STARsolo
1 day ago by dsull ★ 6.8k
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1
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502
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Comment: Comment: Kallisto: to scaledTPM or not to scaledTPM
2 days ago by dsull ★ 6.8k
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351
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Comment: Comment: Unaligned rRNA in RNAseq in balb/cj mouse
8 days ago by dsull ★ 6.8k
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351
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Answer: Answer: Unaligned rRNA in RNAseq in balb/cj mouse
8 days ago by dsull ★ 6.8k
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398
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Comment: Comment: Script for Rstudio
10 days ago by dsull ★ 6.8k
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444
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Comment: Comment: Segmentation fault (core dumped)
12 days ago by dsull ★ 6.8k
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444
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Comment: Comment: Segmentation fault (core dumped)
12 days ago by dsull ★ 6.8k
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845
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Answer: Answer: If changing the RNA-Seq count normalisation method changes the DGE and downstrea
13 days ago by dsull ★ 6.8k
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1
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845
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Comment: Comment: If changing the RNA-Seq count normalisation method changes the DGE and downstrea
13 days ago by dsull ★ 6.8k
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0
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400
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Comment: Comment: Cutadapt&FastQC:sequence length disturbution failed after adapter trimming
22 days ago by dsull ★ 6.8k
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400
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Answer: Answer: Cutadapt&FastQC:sequence length disturbution failed after adapter trimming
22 days ago by dsull ★ 6.8k
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0
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440
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Comment: Comment: Genotype File
22 days ago by dsull ★ 6.8k
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1
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433
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Comment: Comment: DNA SPRITE Expirment Benchmark
27 days ago by dsull ★ 6.8k
2
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1
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433
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Answer: Answer: DNA SPRITE Expirment Benchmark
27 days ago by dsull ★ 6.8k
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1
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510
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Comment: Comment: Non-existent transcript as a result from Salmon
27 days ago by dsull ★ 6.8k
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1.3k
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Comment: Comment: Is "training", fine tuning, or overfitting on "external independent validation d
28 days ago by dsull ★ 6.8k
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2
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1.3k
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Comment: Comment: Is "training", fine tuning, or overfitting on "external independent validation d
28 days ago by dsull ★ 6.8k
0
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1
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1.3k
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Comment: Comment: Is "training", fine tuning, or overfitting on "external independent validation d
28 days ago by dsull ★ 6.8k
1
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1
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1.3k
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Comment: Comment: Is "training", fine tuning, or overfitting on "external independent validation d
29 days ago by dsull ★ 6.8k
2
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1
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1.3k
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Comment: Comment: Is "training", fine tuning, or overfitting on "external independent validation d
29 days ago by dsull ★ 6.8k
1
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1
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626
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Comment: Comment: Low mapping rate using SALMON
29 days ago by dsull ★ 6.8k
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0
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198
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Comment: Comment: How can you separate and ignore the expression changes caused by single cell iso
4 weeks ago by dsull ★ 6.8k
1
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1
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626
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Comment: Comment: Low mapping rate using SALMON
4 weeks ago by dsull ★ 6.8k
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519
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Comment: Comment: Best workflow for identification of isoforms and splice variants
4 weeks ago by dsull ★ 6.8k
2
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2
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519
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Comment: Comment: Best workflow for identification of isoforms and splice variants
4 weeks ago by dsull ★ 6.8k
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0
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903
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Comment: Comment: What bioinformatics codes would you use for performance benchmarking on a new sy
5 weeks ago by dsull ★ 6.8k
0
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0
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262
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Answer: Answer: unmapped reads Kallisto bulk RNA-seq
5 weeks ago by dsull ★ 6.8k
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2
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612
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Comment: Comment: Why do I have * in my FASTA?
5 weeks ago by dsull ★ 6.8k
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0
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391
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Comment: Comment: I encountered a problem while using Mageck to analysis CRISPR screen data
5 weeks ago by dsull ★ 6.8k
2
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1
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493
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Comment: Comment: RNA seq mapping
5 weeks ago by dsull ★ 6.8k
2
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0
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240
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Answer: Answer: extracting cell specific reads from cellranger BAM output file
6 weeks ago by dsull ★ 6.8k
2
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0
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486
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Comment: Comment: how to calculate correlations between sparse data
6 weeks ago by dsull ★ 6.8k
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1
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486
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Comment: Comment: how to calculate correlations between sparse data
6 weeks ago by dsull ★ 6.8k
0
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1
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696
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Comment: Comment: Weird insert size distribution plot
6 weeks ago by dsull ★ 6.8k
2
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0
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279
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Comment: Comment: Understanding the Principle and Mechanism of K-mer Alignment in Bioinformatics
updated 6 weeks ago by 145k • written 6 weeks ago by ★ 6.8k
1
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701
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Comment: Comment: Kallisto - Effect of Kmer size on quantification?
6 weeks ago by dsull ★ 6.8k
0
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1
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701
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Comment: Comment: Kallisto - Effect of Kmer size on quantification?
6 weeks ago by dsull ★ 6.8k
0
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1
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701
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Comment: Comment: Kallisto - Effect of Kmer size on quantification?
6 weeks ago by dsull ★ 6.8k
1
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1
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701
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Comment: Comment: Kallisto - Effect of Kmer size on quantification?
6 weeks ago by dsull ★ 6.8k
0
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0
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406
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Answer: Answer: Is there any tool that can search for a pattern (while allowing mismatch) in fas
7 weeks ago by dsull ★ 6.8k
2
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1
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1.0k
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Comment: Comment: How to improve a bioinformatics study and paper so that it is not considered "to
7 weeks ago by dsull ★ 6.8k
5
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1
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1.0k
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Answer: Answer: How to improve a bioinformatics study and paper so that it is not considered "to
7 weeks ago by dsull ★ 6.8k
0
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0
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305
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Answer: Answer: Fragment size of published single end RNAseq data
8 weeks ago by dsull ★ 6.8k
0
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1
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619
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Comment: Comment: How do decide if a processed scRNA-seq data is read counts or UMI format ?
8 weeks ago by dsull ★ 6.8k
2
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1
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269
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Answer: Answer: kb count -x parameter - what are the three parts?
8 weeks ago by dsull ★ 6.8k
0
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0
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618
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Comment: Comment: 10X #3' RNA seq - How is strandedness determined?
8 weeks ago by dsull ★ 6.8k
2
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0
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284
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Answer: Answer: I am getting an error with Kallisto Bustools wrapper (kb) command to create an i
8 weeks ago by dsull ★ 6.8k
2
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1
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413
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Answer: Answer: Is the 10X multiome chemistry most similar similar to 10XV1, 10XV2, or 10XV3?
9 weeks ago by dsull ★ 6.8k
703 results • Page 1 of 15
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