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Comment: Comment: Which zUMIs output to use for differential gene expression?
4 days ago by dsull ★ 7.2k
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1
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580
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Comment: Comment: Snakemake config errors
14 days ago by dsull ★ 7.2k
2
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0
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344
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Comment: Comment: How to handle paired and unpaired reads in RNAseq pipeline
14 days ago by dsull ★ 7.2k
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1
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580
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Comment: Comment: Snakemake config errors
14 days ago by dsull ★ 7.2k
2
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1
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344
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Answer: Answer: How to handle paired and unpaired reads in RNAseq pipeline
14 days ago by dsull ★ 7.2k
1
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0
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658
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Comment: Comment: Preparation needed to get into Bioinformatic field
16 days ago by dsull ★ 7.2k
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1
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658
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Answer: Answer: Preparation needed to get into Bioinformatic field
16 days ago by dsull ★ 7.2k
2
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2
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597
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Answer: Answer: How well was the rRNA depletion for RNA-Seq experiments
18 days ago by dsull ★ 7.2k
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0
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402
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Comment: Comment: How to do allele specific expression analysis (ASE)
26 days ago by dsull ★ 7.2k
1
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2
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402
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Answer: Answer: How to do allele specific expression analysis (ASE)
26 days ago by dsull ★ 7.2k
2
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0
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1.0k
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Comment: Comment: STAR aligner - Is this still maintained?
29 days ago by dsull ★ 7.2k
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0
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606
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Comment: Comment: Unexpected spliced/unspliced percentages in scRNA-seq data
5 weeks ago by dsull ★ 7.2k
3
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1
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606
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Comment: Comment: Unexpected spliced/unspliced percentages in scRNA-seq data
5 weeks ago by dsull ★ 7.2k
1
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2
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606
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Comment: Comment: Unexpected spliced/unspliced percentages in scRNA-seq data
5 weeks ago by dsull ★ 7.2k
3
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0
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757
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Answer: Answer: Premade RNA-seq pipeline or custom
5 weeks ago by dsull ★ 7.2k
0
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0
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736
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Comment: Comment: Sample-level demultiplex raw FASTQ file
6 weeks ago by dsull ★ 7.2k
1
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0
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1.9k
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Comment: Comment: New Macbook M4 laptops (Pro vs Max)
7 weeks ago by dsull ★ 7.2k
0
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0
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1.9k
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Comment: Comment: New Macbook M4 laptops (Pro vs Max)
7 weeks ago by dsull ★ 7.2k
0
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1
reply
1.9k
views
Comment: Comment: New Macbook M4 laptops (Pro vs Max)
7 weeks ago by dsull ★ 7.2k
1
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0
replies
1.9k
views
Comment: Comment: New Macbook M4 laptops (Pro vs Max)
7 weeks ago by dsull ★ 7.2k
1
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0
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580
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Answer: Answer: rRNA contamination in RNASeq fdata
7 weeks ago by dsull ★ 7.2k
2
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0
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475
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Answer: Answer: STARsolo sorted bam contains 'non-whitelisted' barcodes
8 weeks ago by dsull ★ 7.2k
1
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0
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281
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Answer: Answer: No change in quality score graph even after adapter removal
9 weeks ago by dsull ★ 7.2k
0
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0
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885
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Comment: Comment: Transcript coverage 3' bias. Is it really that determining?
9 weeks ago by dsull ★ 7.2k
0
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1
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885
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Comment: Comment: Transcript coverage 3' bias. Is it really that determining?
9 weeks ago by dsull ★ 7.2k
1
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0
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721
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Comment: Comment: Understanding STARsolo --soloStrand values and 10X scRNA-seq library structure
9 weeks ago by dsull ★ 7.2k
0
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0
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413
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Answer: Answer: Spatial correlation between two continuous variables
10 weeks ago by dsull ★ 7.2k
0
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1
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721
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Comment: Comment: Understanding STARsolo --soloStrand values and 10X scRNA-seq library structure
10 weeks ago by dsull ★ 7.2k
0
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0
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1.3k
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Comment: Comment: Convert RNASeq V2 data in cBioPortal having RSEM normalized results to TPM value
10 weeks ago by dsull ★ 7.2k
0
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1
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1.3k
views
Comment: Comment: Convert RNASeq V2 data in cBioPortal having RSEM normalized results to TPM value
10 weeks ago by dsull ★ 7.2k
3
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1
reply
721
views
Answer: Answer: Understanding STARsolo --soloStrand values and 10X scRNA-seq library structure
10 weeks ago by dsull ★ 7.2k
0
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0
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563
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Answer: Answer: PossionDis method for identification of differentially expressed genes.
11 weeks ago by dsull ★ 7.2k
1
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0
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966
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Comment: Comment: DE analysis from kallisto estimated counts (only)
11 weeks ago by dsull ★ 7.2k
0
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1
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966
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Comment: Comment: DE analysis from kallisto estimated counts (only)
12 weeks ago by dsull ★ 7.2k
0
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1
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966
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Comment: Comment: DE analysis from kallisto estimated counts (only)
12 weeks ago by dsull ★ 7.2k
0
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0
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458
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Comment: Comment: How to perform corrected Cell Barcode/UMI calling with an externally sorted BAM?
3 months ago by dsull ★ 7.2k
1
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0
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681
views
Comment: Comment: Pre-pseudoalignment preprocessing
3 months ago by dsull ★ 7.2k
1
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1
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609
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Comment: Comment: alignment to human transcriptome with Bowtie2
3 months ago by dsull ★ 7.2k
0
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0
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949
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Comment: Comment: How the field has changed in the last 5 years, and 25 years (up to 2024)
3 months ago by dsull ★ 7.2k
1
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0
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860
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Comment: Comment: How to handle RNA seq data with unbalanced % rRNA by group?
3 months ago by dsull ★ 7.2k
0
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1
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1.4k
views
Comment: Comment: How to determine whether it is 10x data
3 months ago by dsull ★ 7.2k
3
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2
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860
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Answer: Answer: How to handle RNA seq data with unbalanced % rRNA by group?
4 months ago by dsull ★ 7.2k
0
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0
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651
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Comment: Comment: How to count the number and proportion of different barcode combinations in DNA
updated 4 months ago by 44k • written 4 months ago by ★ 7.2k
1
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0
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465
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Comment: Comment: Help With Sleuth
4 months ago by dsull ★ 7.2k
0
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0
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780
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Comment: Comment: ncRNA, pseudogenes and lncRNA genes in highly variable features ( scRNA)
4 months ago by dsull ★ 7.2k
2
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0
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452
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Answer: Answer: How far pangenome from being the mainstream?
4 months ago by dsull ★ 7.2k
0
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1
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780
views
Comment: Comment: ncRNA, pseudogenes and lncRNA genes in highly variable features ( scRNA)
4 months ago by dsull ★ 7.2k
0
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1
reply
780
views
Comment: Comment: ncRNA, pseudogenes and lncRNA genes in highly variable features ( scRNA)
4 months ago by dsull ★ 7.2k
1
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1
reply
680
views
Comment: Comment: Problem while using Tophat 2.1.0 to search gene fusions
4 months ago by dsull ★ 7.2k
1
vote
1
reply
988
views
Answer: Answer: Salmon quantification not as expected; "versionInfo.json doesn't seem to exist"
5 months ago by dsull ★ 7.2k
755 results • Page 1 of 16
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